Gavialis gangeticus (Gharial): 109301533
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Entry
109301533 CDS
T07453
Symbol
ABCB11
Name
(RefSeq) bile salt export pump
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109301533 (ABCB11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ggn02000
]
109301533 (ABCB11)
04147 Exosome [BR:
ggn04147
]
109301533 (ABCB11)
Transporters [BR:
ggn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
109301533 (ABCB11)
Exosome [BR:
ggn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109301533 (ABCB11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
Zeta_toxin
AAA_15
AAA_29
ABC_ATPase
AAA_16
AAA_30
Rad17
AAA_7
AAA_21
AAA_5
AAA_24
Motif
Other DBs
NCBI-GeneID:
109301533
NCBI-ProteinID:
XP_019378303
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MSDPVALCSIKKFGEDNHAFDLDSSNNGFEKPEYFCINEEPPPKKKKGDKSSNKKENSIR
IGFFELFRFSSSSEIFMMTFGSFCAILHGAAQPCMLLVFGIMTDTFIQYDIEKQELRDPG
KTCVNNTIMWINSSLHQNETIPSISCGLLDIESEMTTFAAYYAGIGCAVLVLGYLQICLW
VISAARQIQKIRKAYFRKVMRMDIGWFDCTSVGELNTHLSDDVNKISDAIADQVAIFIQR
FSTFICGFLLGFVSGWKLTLVIIAASPLIGIGAAIYGLAVAKLTSRELNAYAKAGAVADE
VLSSIRTVAAFGGERKEVERYDKNLVFAQRWGIRKGIIMGFFTGYMWFIIFLCYALAFWY
GSQLVLEEEEYSPGTLLQVFFGVLIGALNLGQASPCLEAFATGRGAATGIFETIDEKPTI
DSMSENGYKLDKVKGEIEFHNVTFYYPSRPEVKILDNLNMVIKSGETTAFVGPSGAGKST
AVQLIQRFYDPSEGMVTLDGHDIRSLNIRWLRSQIGIVEQEPVLFATTIAENIRYGRDEA
TMEDIIKAAKEANAYNFIMDLPQQFDTHVGEGGNQMSGGQKQRIAIARALVRNPKILLLD
MATSALDNESEAIVHEALHKGHLNRTAISVTHRLSTIKTADVIIGFEHGRAVERGTHEEL
LERKGVYFTLVTLQSQGDKTLNETAVKITENNLLEPNLERVQHFRRGSYRASLRASIRQR
SRSQLSNVVPEHPFAIAGDHSDAVYNMLHYDEDFTSSKKETFVNDKEGEVEPAPVARILK
YNAPEWPYMLFGSFGAAVNGSLSPLYALLFSQILGTFSILDEEEQRYQINTICLLFVFVG
VMSLFTQFLQGYAFAKSGELLTRRLRKIGFEAMLGQEIGWFDDHRNSPGALTTRLATDAS
QVQGATGSQIGMIVNSLANIGVAIVIAFYFSWKLSLVILCFLPFLALSGAVQAKMLTGFA
SQDKQALEATGQISSEALSNIRTVAGIGKEKMFIKAYEEQLEKPYRASTNKANVYGICFG
FSQCIVFIANSVSYRYGGFLVESEGLHYSYVFRVISSIVTSGTALGRASSYTPNYAKAKI
SAARFFQLVDRVPLISVYSDKGEKWNDFKGSITFLNCKFTYPSRPDTQVLNDLSVTVKPG
QTLALVGSSGCGKSTCVQLLERFYDPEKGSVLIDGHDTKKVNIQFLRSKIGIVSQEPVLF
DCSIADNIKYGNNTKKITMEKVTEAAKKAHLHDFVMSLPAKYETNVGAQGSQLSRGQKQR
IAIARAIIRDPKILLLDEATSALDTESEKTVQAALDKAREGRTCIVIAHRLSTIQHSDII
AVMSQGVIIEKGTHSELMAMKGAYYKLVTTGAPIS
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcctgttgctctgtgcagcattaagaaatttggagaggataatcatgctttt
gacttggatagttcaaataacggctttgagaaaccagagtatttctgtataaatgaggaa
ccgcctccaaagaagaaaaagggggacaagtcatcaaacaagaaagaaaacagtattcgg
attggcttctttgaactgtttcgattttcttcatcttctgagattttcatgatgactttc
ggtagtttctgtgctattcttcatggagcagcccagccatgcatgttgcttgtctttggt
ataatgacagacacatttattcaatatgacattgagaagcaggagcttagagatccaggc
aaaacatgtgtgaataacaccataatgtggatcaacagttcccttcaccaaaatgaaact
atcccatcaataagttgcgggttactggacattgaaagtgaaatgaccacatttgcagct
tactatgcaggaattggctgtgcagtgcttgtgctgggatacctccaaatctgcctttgg
gtaatatctgcagctcgacagattcagaaaatcaggaaagcttatttcaggaaagtaatg
agaatggatataggctggtttgattgcacatcagttggagaattgaatacacacctttct
gacgatgttaataaaatcagtgatgctattgctgatcaagtagcgatctttatccagcgc
ttcagtacctttatttgtggattcctgttaggatttgtcagtggctggaaactgactttg
gtcattattgcagctagtccattgattgggattggagcagccatctatggcttggctgta
gccaaactgacaagccgagagttaaatgcctatgcaaaagctggggctgtggctgatgaa
gtgctctcatccatcagaactgtggcagcttttggtggggagaggaaagaagttgaaaga
tatgataaaaacctagtgtttgctcagcgctggggaattagaaaagggataataatggga
ttcttcactggttacatgtggtttataatattcctatgttatgcattagccttttggtat
ggctcacaacttgtcctggaagaagaagagtattcgccagggactcttctacaggttttc
tttggagtcttaataggtgctttaaatctcggtcaagcttctccttgtttggaggctttt
gccactggacgtggggctgcaacaggcatctttgagacaatagatgaaaaacctaccatt
gacagtatgtcagagaatggctacaaactggataaagtaaaaggtgaaattgagttccat
aatgtaacattctattacccatccaggccagaagtaaagattttggataacctcaacatg
gttattaaatcaggggagacaactgcttttgttggaccaagtggagctgggaaaagcact
gcagtgcagcttatccagcgattctatgaccctagtgaaggcatggttactctggatggc
catgacattcgctcccttaatattaggtggctgcgctcacagattggtattgttgagcaa
gagccagtcctgtttgctaccacaattgcagagaacattcgttatgggcgagatgaagca
actatggaagacatcatcaaagcagccaaggaggccaacgcctacaacttcatcatggat
ctgccccagcaatttgatacacatgtgggtgagggtggaaaccagatgagtggaggtcag
aaacaaaggatagctattgctcgcgcccttgtccgaaacccaaaaatcctgctactggat
atggcaacatcagcactggacaacgaaagtgaagctattgtccatgaagcgcttcataag
ggtcatctaaaccgcactgcaatctcagtgactcatcgtctctccacaatcaaaactgct
gatgtcatcatagggtttgagcatggaagggctgttgagagaggaacacatgaggagctg
ctggaaagaaaaggggtttattttacactggtgactttgcaaagccaaggagacaaaaca
cttaatgaaacagcagtaaaaataacagaaaataacttgcttgagccaaaccttgagaga
gtgcagcattttagaagagggagctatcgagccagcttgcgagcttcaattcggcagcgt
tccaggtctcagctctctaatgtggtacctgaacatccattcgccattgcaggagaccac
tcagatgctgtatacaatatgctgcattatgatgaagactttacatcttctaaaaaggaa
acttttgttaatgacaaagaaggggaagtggaacctgcaccagttgcaaggattttgaaa
tacaatgctccagaatggccttacatgttgtttggatcttttggagcagctgtgaatggg
tcactcagtccactctatgctctgctattcagtcagattcttgggaccttttccattctt
gatgaggaagagcaaagataccagataaacacaatctgcctgctctttgtgtttgttggt
gttatgtcacttttcacacaattcctacagggatatgcattcgctaagtctggtgagttg
cttacaagacgattaaggaaaattggtttcgaggctatgctggggcaagagattggttgg
tttgatgaccacagaaacagccctggtgctttgacaacaagacttgctacagatgcatca
caggttcaaggggctactggatctcagataggaatgattgtcaactcccttgccaacatt
ggagtggccattgtcatcgctttctatttcagctggaaactaagtcttgttatactttgc
ttcctgccctttttagccttatctggggctgtccaggctaaaatgctgacaggatttgct
tctcaagacaagcaagctctggaagctactgggcagatttccagtgaagccctctcaaac
atcaggactgtagctggaataggaaaagagaaaatgtttattaaagcatatgaagaacag
cttgaaaagccctatagagcttcaaccaacaaggcaaatgtttacggaatttgctttggc
ttttcccagtgcatagtgttcatagccaattctgtctcatacagatatggggggttttta
gttgagagtgaagggcttcattatagctacgttttcagggtgatctcttctattgtaacc
agtggaactgctttaggaagagcttcttcctatactccaaactatgctaaagcaaaaata
tctgctgcacggttttttcaactggtggatcgtgttcctctaatcagtgtttacagtgac
aaaggggaaaagtggaatgatttcaagggaagcattacatttctcaactgtaaattcaca
tatccttctcggcctgatacacaagttttgaatgacctctcggtgacagttaaaccaggc
cagacgcttgcattggttggaagtagtggatgtggcaaaagtacctgtgtccagcttctg
gagcgtttctatgatcctgagaagggaagtgtgttaatagatggacatgacaccaagaaa
gtaaatatacaatttcttagatctaaaattggaatagtatcccaggaacctgtgttgttt
gactgcagtattgctgataatattaaatatggcaataataccaagaagatcactatggag
aaagttacagaagcggcaaagaaggcgcatcttcatgactttgttatgtcacttcctgcg
aaatatgaaactaatgtgggagctcagggatctcagctctctcgtgggcaaaagcaacgc
attgctatagcacgggctatcatacgtgatcctaaaattttattactagatgaagcaaca
tctgccttagacacagaaagtgaaaagactgtgcaagctgcattggataaagcacgagaa
gggcggacctgcattgtcattgcacaccgtctgtctacaattcagcattctgatatcatc
gctgtcatgtctcaaggagtcattattgaaaagggcactcacagtgaactgatggccatg
aaaggagcttattacaaacttgtcacgactggagcacctattagctga
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integrated database retrieval system
