Gavialis gangeticus (Gharial): 109301630
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Entry
109301630 CDS
T07453
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03013
Nucleocytoplasmic transport
ggn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109301630 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109301630 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109301630 (NUP153)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109301630 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
109301630
NCBI-ProteinID:
XP_019378417
LinkDB
All DBs
Position
Unknown
AA seq
1425 aa
AA seq
DB search
MKNIVPGWLQKYFNKSEEEHVDTSEPRNQGENPLSYHHDYTEEDTTVIDGRVTPESTRII
LEEPSTSRSALNFSDVLTRPSLHRSHLNCTMLDSPAPHCQPSTSSALGIGSSGLSLVKEI
KDSTSQHDDDNISTTSGFSSRASDKDIAVSKNTVPPLWSAEAERSHSLSQHTPTSSKKPA
FNLSAFGALSPSFGNTSVLKTSQLGDSPFYPGKTTYGGAAAAARQSKARITPYQMPVRRQ
MKAKQANVQSYGVTSSTARRILQSLEKMSSPLADAKRIPSSVSSPHSSPVDRSVLDITGF
HSKRKRVESQLPPVQKLVTPKTVSLSMSRSQYFKPSLTPTAESGKARQRVDIKHKGMREK
NLAIELRTEPPESNSTYPKFSSPASNGLSSGGGGGGGKMRRERGLHYISKPGQEQEVEEP
VLPKISLPISTMSLPQFSFGSLAAAATTTVSSSSITPTQPVINKVPPASNASSPVFRFSS
PIVKSTEAEVLPPLSIGFTFSVPVVKSTEPSGSSDSPMPHLFSPGTTPLNSTSNKKKGND
DYDGPFKPAKVLKEGSVLDVLKGPGFTSPKTHSPAAEQPVTTSTVVYTRPAINIISAGAS
GAKETSKPTSSYWQSDACNTCLLQNKTADDKCITCPAETVSAVDTTKQTGTSPLNNTVKS
AVSTTGTLGFGDKFKPAAGTWDCDTCLVQNKPDATKCVACETPKPGTGVMPVMTLPVVTE
NAVAVTSSSSCTETTVALGFGDKFKKPKGSWDCTVCLVSNKAEDSKCVACQSEKPGGSVP
VTSSSTSSFFVPSGGFMGLDKFKKPEGSWDCEICLVQNKAEATKCVACESAKPGTKAELK
GFDNAAVSSAVPDPSFTFGIQTSSSESLQTLGSTGGFKLGEQGGFKFGITSEVGSSGIVT
GGFKFPKTSGDFTFGVSSSDSKSEESKKDSKSNNNNFTFGLPSGTSNPSTSVCQFGTSTL
GQQEKKDEPTLGGFSFGTSSTASLAPAENKTGASGFGFGTKEDKDIATTPFAFKKSDEKK
DETPSTKGGFSFGSVESVPVPAPASQFVLGRTEEKLDSVTSTATSLVFGKKVENEETKAQ
PVFSFGKSEQTKEESTVKPTFSFSLAKPAEKETEQTKPTFAFGAQANTADQGAAKPSFSF
LSSGSSSTAVPSTSANSTGVFGSSTSASNPPPVPSPFVFGQASNTVSNSAFGSSAESTAS
QSFGFSQENKPATSSSTGAAVAPFVFGSGASSNNTANPGFAFGATTTSSSTGSTSSFVFG
SGSSAPAAGPAFGVSQTPAFGQSQGSSQPNAPTFGSLSSTTLFSAGSQPAAPAFGSGSSS
SQAPAFGQQANQQPGFGSGTPNSGSIFQFGSNPTNFNFGNSNPGVFTFGANPNAPAAPAQ
PSGSSGFSFNQPPTFTVGSNGKNVFSASGSSVSGRKIKTAVRRRK
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacattgtaccagggtggttacaaaagtacttcaataaaagcgaagaggagcat
gtagatacaagtgaacctagaaaccagggtgagaatccattaagctaccatcatgattat
acagaggaagacaccactgtgattgatggaagagtcactcctgagtctaccagaattatt
ttggaagaaccatccacgagtagatctgcattaaacttctcggacgtgttaacaaggccc
tctcttcatcgaagtcatctgaattgcaccatgttggattccccagcaccacactgtcaa
ccctccacatcctctgctcttggcattggcagttctggactctccttagtaaaagaaata
aaagattctacctctcagcatgatgatgataacatctcaactaccagtggtttctcttct
agggcatctgataaagatatagcagtttcaaaaaatactgtaccacctctctggtccgca
gaagcagaacgatctcattccctctcacaacatacacctaccagctctaaaaaacctgca
ttcaacttatcagcttttggagctctctccccttcatttggtaacacttctgtccttaag
acaagccagcttggggattctccattttatcctggaaaaaccacttatggtggggcagct
gcagcagcaaggcagtctaaagcacgaattactccttatcagatgccggtaagaagacaa
atgaaagcaaagcaagcaaatgtgcagtcctatggagtgacaagttccacggcacggcgc
atcttgcagtctttggaaaagatgtcaagtcctttagcggatgctaaaaggattccatcc
tctgtttcttctccacactcttctcctgtggacaggagtgtgctggatattactggcttc
cattcaaaaagaaaacgggtggaatcccaactcccgccggtccagaaacttgtaacaccg
aagaccgtttctttgtcaatgagccggtcccagtattttaaaccatctctgactcctact
gcagagtcaggcaaagctcgacagagagtagacataaagcacaaaggaatgagggagaaa
aatctagctatagaactgcgaacagaaccacctgaaagcaattctacataccccaaattc
agtagtcctgcctctaatggactgtcttcaggaggaggcggcggcggtggcaaaatgaga
agagaaagaggcctacattatatatcgaaacctggacaagaacaggaggtggaggagcca
gtacttccaaaaatatctttacccatcagtactatgtcattgcctcagttcagctttggt
tcccttgctgctgctgctactactactgtctcatcatcatcaatcactccgacacaacca
gtgattaacaaggtgccgccagcaagtaatgctagcagccccgtgttcagattttcatct
ccaattgtaaaatctactgaggcagaagtgctacctccgttgtctattgggtttacattt
agtgttcctgttgtgaaatcaacagagccttctggatccagtgatagtccaatgccacat
ctgtttagcccaggtaccacccctttaaatagcaccagcaataagaagaaaggaaatgat
gactatgatggccccttcaagcctgcaaaagtcttgaaagaggggagtgtgctggatgtt
ttgaaaggccctggatttacttctccaaaaacccactctcctgcagctgagcagccagtt
acaacaagcacagtggtttatacaaggcctgcaataaatattatttctgcaggtgcttca
ggagctaaagagacctctaagccgacttcatcatattggcagtctgacgcatgcaacacg
tgtcttctacaaaacaagactgcagacgacaaatgtataacttgtccagctgaaacagtg
tcagcggtagatactactaaacagactggaacttcacctctaaacaacactgttaagtca
gctgtatccacaacagggacactgggcttcggagacaaatttaaaccagcagcaggaaca
tgggattgtgatacgtgtttagtccaaaataaacctgatgctaccaaatgtgtggcctgt
gagacaccaaagcctggaacaggagtcatgcctgttatgacattgccagtagtcacagaa
aatgcagtagcagtgacttcctcttctagctgcactgaaacaacagttgctttggggttt
ggagacaaattcaaaaagccgaagggttcttgggactgtacagtgtgccttgtgtcaaat
aaggcagaggacagcaaatgcgtagcctgtcagtctgagaagccagggggttcagtgcct
gtgaccagcagcagtacttcctcattctttgttccttctggaggatttatgggattagac
aaattcaagaagccggaaggaagctgggactgtgaaatctgcttggtacaaaacaaagca
gaggccacaaagtgtgtagcttgtgagagtgcaaaaccaggcaccaaagctgagctcaaa
ggttttgataatgcagccgtgtcctcagctgttcctgacccatcatttacattcggtatt
cagacgtcgtcctcagagtctttgcagacgttaggaagcacaggaggttttaagctcgga
gagcaagggggtttcaagtttggcattacatcagaagtgggatcctcaggcattgtaaca
ggggggtttaagtttcctaaaacttcaggggacttcacatttggagtctcttcttcagac
tctaaatcagaggagagtaaaaaagacagtaagagtaacaacaataattttacctttgga
cttccctcgggtacaagcaatccatctacttcagtttgtcagtttgggacgtcaaccctg
ggacagcaggaaaagaaggacgaacctaccttaggaggtttcagttttggcacaagttcc
actgcctccttagctccagctgagaataaaactggagcaagtggctttggttttggcacc
aaggaggacaaagacattgcaacaactccctttgcatttaagaaatcagatgagaaaaaa
gatgagactccttctacaaagggaggcttctcttttggcagtgtggagtctgtgcctgta
cctgcacctgcctctcagtttgttttgggaaggacagaagagaagctggactctgtcacc
tccactgctacttcattagtgtttgggaagaaagtggagaatgaggaaaccaaggcacaa
cccgtgttttcgtttggaaagtctgagcaaaccaaagaagagagtacagtgaaacccact
ttcagttttagtttggcaaaaccagcagagaaggaaactgaacaaacaaagccaacattt
gcatttggggcacaagccaatactgcagatcaaggagcagcaaagccaagtttcagtttc
ttaagttccggttcctccagcacagctgtaccaagcacttcagcaaacagcactggtgtg
ttcggaagctccacctctgcctcgaatccaccaccagttcccagtccctttgtgtttgga
caagccagcaacactgtgagcaattctgcttttggcagttctgcagagtctactgcatcg
cagtcatttgggttctctcaagaaaacaaaccagcaacatcctccagcacaggggcagct
gtcgctccatttgtctttggttcaggagctagcagtaacaatacagcaaaccctggtttc
gcctttggagccacaactacatcaagctctacaggttccacctcttcatttgtatttggc
tctgggtcttcagcacctgctgctggtccagcatttggtgtcagccagacaccagcattt
ggtcagagtcaaggctccagccagccaaatgctccaacctttggatccttatcatcaacc
actttattttcagctggctctcagcctgctgctccagcctttgggtctggatcaagcagt
agtcaagctcctgcatttggacagcaagcaaatcaacagcctggctttggctctggtaca
cccaattctggttcgatattccagtttggaagtaatcctactaatttcaacttcggaaat
agcaacccgggagtatttacctttggtgcaaatcccaatgcaccagcagcaccagcccaa
ccctctggctcttcaggattttcatttaaccagcctccaacttttacagtggggagtaat
gggaaaaatgttttctctgcttcgggatcttcagtttctggtcggaagataaagactgcg
gttagacgtagaaaataa
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