Gavialis gangeticus (Gharial): 109301872
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Entry
109301872 CDS
T07453
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109301872 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109301872 (HSPD1)
03110 Chaperones and folding catalysts [BR:
ggn03110
]
109301872 (HSPD1)
03029 Mitochondrial biogenesis [BR:
ggn03029
]
109301872 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ggn04147
]
109301872 (HSPD1)
Enzymes [BR:
ggn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
109301872 (HSPD1)
Messenger RNA biogenesis [BR:
ggn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
109301872 (HSPD1)
Chaperones and folding catalysts [BR:
ggn03110
]
Heat shock proteins
HSP60 / Chaperonin
109301872 (HSPD1)
Mitochondrial biogenesis [BR:
ggn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
109301872 (HSPD1)
Exosome [BR:
ggn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109301872 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
109301872 (HSPD1)
Exosomal proteins of breast cancer cells
109301872 (HSPD1)
Exosomal proteins of colorectal cancer cells
109301872 (HSPD1)
Exosomal proteins of bladder cancer cells
109301872 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
109301872
NCBI-ProteinID:
XP_019378688
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MLRVPAALRRLRPLGRALASPSARAYAKDVKFGPDARALMLQGVDLLADAVALTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGARLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKLSKPVTTPEEIAQVATISANGDQ
EIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYVLISEKKISSVQSIVPALEIANAHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGTVFGEEGLNLNIEDIQAHDFGKVGEVIVTKDDSMFLKG
KGEKAQIEKRILEIAEQLEVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDAITPVNEDQRIGIDIIKRTLKIPAMTIA
KNAGVEGSLIVEKIMQSLPEIGYDAMLGDFVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEIPKEEKEAAMGGMGGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtgtccccgccgctctgcgtcggctgaggccgctgggccgggccctcgcgtcg
ccctccgcgcgcgcctacgccaaggacgtgaagttcgggccggacgcgcgcgcgctcatg
ctgcagggggtcgatctgttggccgacgccgtcgccctcactatggggcccaagggaaga
actgttattattgagcaaagctggggaagtccgaaggtgacaaaagatggtgtgacagta
gccaaagcaattgatttgaaagacaaatataaaaatattggagccaggctagtgcaagat
gttgccaacaacacaaatgaagaagcaggagatggtaccactactgcaacagtccttgca
cgtgccattgcaaaggagggctttgagaagatcagcaaaggagctaatccggtggaaatc
aggagaggtgtgatgctagcagttgatgctgtcatagctgaattaaagaaactatctaaa
cctgttacaactccagaagaaattgcacaggttgccacaatctcagcaaatggggaccaa
gaaattggcaacataatctctgatgccatgaaaaaagttggacggaagggagttatcaca
gttaaggatggaaaaactctgaacgatgagttggaaatcattgaaggcatgaagtttgac
agaggttacatctctccatacttcattaatacagctaaaggacagaaatgtgaattccag
gatgcttatgttttaataagtgagaagaaaatttccagtgttcagtccattgttccagct
cttgaaattgccaatgctcaccgtaaacctttagtcatagttgctgaagatgttgatggt
gaggctctcagtactctagtcttaaacagactaaaggttggccttcaggttgttgctgta
aaagcaccaggttttggagacaatagaaagaaccagcttaaagatatggcaattgctacg
ggtggcactgtattcggagaagagggtttaaacctgaatatagaagatattcaggctcat
gactttggcaaggttggagaggtcattgtgacaaaagatgattctatgttcctgaaagga
aagggagaaaaggctcaaattgaaaaacgtattctagaaatcgctgaacagttagaagtt
actacaagtgaatatgagaaggagaaattgaatgaacgactggccaaactctctgatgga
gtagcagtactaaaggttggcggcacaagtgatgttgaagtgaatgagaaaaaagataga
gtaactgatgcgctgaacgctactcgtgctgctgtagaggaaggcatagtcccaggaggt
ggttgtgcattacttcgatgcatcccagcactagatgctataactccagtcaatgaagat
caaagaattggcatagacatcattaagagaacactgaaaattccagcaatgactattgct
aagaatgcaggtgttgaaggatcactgatagttgaaaaaatcatgcagagcctgccagaa
attggctatgatgctatgcttggtgattttgtgaatatggttgagaaaggaatcattgac
ccaacgaaggtcgtaagaactgctctgatggatgctgcaggtgttgcttcccttttatca
acagcagaagctgtagttacagaaattcctaaagaggagaaggaagctgcaatgggagga
atgggtggaatggggggaggaatgggaggtggcatgttctaa
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