Gavialis gangeticus (Gharial): 109301913
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Entry
109301913 CDS
T07453
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 1B isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggn03036
]
109301913 (KDM1B)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
109301913 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Pyr_redox_2
SWIRM
Thi4
Pyr_redox
DAO
HI0933_like
FAD_binding_2
FAD_binding_3
FAD_oxidored
Lycopene_cycl
Pyr_redox_3
NAD_binding_9
2-Hacid_dh_C
GIDA
IlvN
AlaDh_PNT_C
NAD_binding_7
Attractin
Motif
Other DBs
NCBI-GeneID:
109301913
NCBI-ProteinID:
XP_019378801
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MSAGRVRAKKKASSVDQSPDSLPLRSSGRQVKKKAAETADDDDEATSEKKYRKCEKAGCT
ATCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDYYYRSHKDGYEKYTAWKRIWTS
NGKSEPSPKAFMADQQLPYWVQCTKPACGKWRQLTKEIQLTSQIAKTYRCGMKLSNSTKT
EGSDQCSMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPFLAAYYPDCVGMSPSCTSTNR
LLGESNTVKLEHLKSMPNLAVSGLNKYFQPFYQPNECGKALCVRPDVMELDELYEFPEYS
RDPTMYLALRNLILALWYTNCKEALTPQKCTHHIIVRGLVRIRCVQEMERILYFMTRKGL
INTGILSVSPDQYLLPKEYHNKSVIIVGSGAAGLAAAKQLHNFGIKVIILEAKERIGGRV
WDDKTFKGITVGRGAQIVNGCVNNPVALMCEQLGIKMHRLGERCDLIQEGGRITDPTIDK
RMDFHFNAILDVVSEWRKDKSQHQDVPLGEKIQEIYKAFIQESGIQFSELEEKVLQFHLS
NLEYACGSNLSLVSARSWDHNEFFAQFAGDHTLLTVGYSTVLDKLAEGVDIRLNFPVRNI
DYSGEEVQVTTTDGTMWAAQKVLVTVPLALLQKNTIQFNPPLPEKKIKAINGLGAGVIEK
IALQFPYRFWDSKIQGADFFGHVPPNSSQRGLFSVFYDMDPQGKYSVLMSVVTGDAVMTI
KNLDDKQVLQQCMTVLRELFKEQEVPDPVKFFVTRWSQDPWTQMAYSFVKTGGSGEAYDI
LAEDVQGKIFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctggaagagtacgggcaaaaaaaaaggcatcgtctgtggatcagtctccagat
agccttcctttgcggagctctgggagacaggtgaagaagaaggcggctgaaacagcagat
gacgacgatgaagcaacatcggagaagaagtacagaaagtgtgaaaaagctggttgcact
gcaacatgtcctgtttgcttcgcaagtgctgccgaaaggtgtgctaaaaatggctacaca
tctagatggtatcatctctcctgtggggaacacttctgcaatgagtgttttgattattat
tatcgaagccataaagatggttatgagaaatacactgcttggaaaaggatttggactagt
aatggtaaaagtgagcccagtcctaaagctttcatggctgatcaacagcttccttactgg
gtacagtgcaccaagccagcatgtgggaagtggcgtcagctgacaaaggaaatccagctc
acttcacaaatagccaaaacgtaccgttgtggtatgaaacttagcaattctaccaagact
gagggctcagaccagtgttccatgcctgaggatttgagagttgctgaagtctcagaccac
tggtggtactccatgctcattctccctcccttgctgaaagacagtgtagcagctcccttt
ctcgctgcatactatccagattgtgtgggcatgagtccatcctgtaccagcactaaccga
ttactgggtgaatccaacactgtgaagttagagcatttaaagagcatgcctaatttggct
gtttcagggttgaacaaatacttccagcctttttaccagcccaatgaatgtggtaaagca
ctctgtgtgagaccagatgtcatggaactagatgaactctatgagttcccagaatattca
agagaccctactatgtacttggccttaagaaacctcattctggctctgtggtatacaaac
tgcaaagaagctctcactcctcagaaatgtacgcatcacatcattgttcgggggcttgtg
cgtattcgctgtgtacaagagatggagaggattctgtactttatgacaagaaaagggctg
attaatacagggattttgtcagtcagtcctgaccagtatcttcttcccaaagaataccac
aataaatctgtcattattgttggatctggtgcagctgggttagcagctgcaaaacagctt
cacaattttggaattaaggtcatcatactagaagctaaagagagaatcggtgggcgagtg
tgggatgataaaactttcaaaggaatcactgttggaaggggagcacagattgtcaatgga
tgcgtcaacaacccagtagcactaatgtgtgagcaacttggcattaaaatgcacagactt
ggggagagatgtgatttgatccaggaaggtggacgaataactgatcccactatagataag
cgcatggacttccatttcaatgccatcttggatgttgtctctgagtggagaaaagataag
agccagcatcaagatgtccctctcggtgagaagatacaggagatctacaaagcctttatt
caggagtctggtatccagttcagtgagctggaggaaaaggtactacagttccatctcagt
aacctggaatatgcctgtggcagcaacctctctctggtatctgcacgctcatgggaccac
aatgaattttttgcccagtttgctggagatcacactcttttaacagtgggatactctact
gtgttagataaactggctgaaggtgtggacattcggcttaattttccggtacgcaacatt
gactattctggagaagaagtccaggtcacaacaacagatggaactatgtgggcagcgcaa
aaggttttagttactgtaccactagcgcttcttcaaaaaaacactattcagtttaatcct
ccactgccagagaaaaaaattaaagccattaatggtttaggagcaggagtcattgagaag
attgctttacagtttccttacagattttgggacagcaaaattcaaggagctgattttttt
ggtcacgttccacctaattccagccaacgtggactatttagtgtcttttatgacatggat
ccacagggaaaatacagtgttctaatgtcagtggttactggagatgctgtgatgacaatt
aagaatttagatgataaacaagtattacagcaatgcatgactgtacttcgagagctgttt
aaggagcaggaagttcctgatccagtaaaattctttgttacacgatggagccaagacccc
tggacccagatggcatacagttttgtaaagacaggtggcagtggggaggcttatgacatt
ctagctgaagatgtacaaggaaaaatcttctttgctggtgaggccacaaacaggcacttt
ccccagacggttacaggagcctatttgagcggcgttcgagaagcaagcaaaatagcagca
ttttga
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integrated database retrieval system
