KEGG   Gavialis gangeticus (Gharial): 109301970
Entry
109301970         CDS       T07453                                 
Symbol
FN1
Name
(RefSeq) fibronectin isoform X1
  KO
K05717  fibronectin 1
Organism
ggn  Gavialis gangeticus (Gharial)
Pathway
ggn04510  Focal adhesion
ggn04512  ECM-receptor interaction
ggn04810  Regulation of actin cytoskeleton
ggn04820  Cytoskeleton in muscle cells
ggn05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109301970 (FN1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109301970 (FN1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109301970 (FN1)
   04810 Regulation of actin cytoskeleton
    109301970 (FN1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    109301970 (FN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ggn04131]
    109301970 (FN1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ggn04147]
    109301970 (FN1)
   00536 Glycosaminoglycan binding proteins [BR:ggn00536]
    109301970 (FN1)
   04990 Domain-containing proteins not elsewhere classified [BR:ggn04990]
    109301970 (FN1)
Membrane trafficking [BR:ggn04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   ER-Golgi intermediate compartment (ERGIC) proteins
    109301970 (FN1)
Exosome [BR:ggn04147]
 Exosomal proteins
  Exosomal proteins of bladder cancer cells
   109301970 (FN1)
Glycosaminoglycan binding proteins [BR:ggn00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   109301970 (FN1)
Domain-containing proteins not elsewhere classified [BR:ggn04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type I domain-containing proteins
   109301970 (FN1)
SSDB
Motif
Pfam: fn3 fn1 Ig_DSCAM-DSCAML_C Pur_ac_phosph_N Fn3_Dep-1_2nd fn2 FN3_Tor_3rd Arylsulfotran_N
Other DBs
NCBI-GeneID: 109301970
NCBI-ProteinID: XP_019378929
LinkDB
Position
Unknown
AA seq 2476 aa
MPRSPAGRRLLLLLLFALCLGVRCTERTAAKSRRQAQQIVQPPVPATQSKQGCFDNGRHY
QINQQWERIYLGNTLVCTCYGGSRGFNCESKPEPEETCFDKYTGSTYRVGETYERPKDSM
IWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTC
KPVAERCYDNNAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDHDTKTS
YRIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHTSLHTTSTGSGSSSFTDVRTALYQLQ
PQPQPYGQCITDNGVVYSVGMQWLKTQGSQQMLCTCLGNGVSCKEIAVTQTYGGNSNGEP
CVLPFTFDGRTFYSCTTEGRTDGQLWCSTTSDFVQDRKYSFCTEQNGLVQTRGGNSNGAL
CYFPFLYNNRNYTDCTSEGRRDNMKWCGTTPNYDADQKFGFCPMAAHEEACTTTEGVMYR
VGDQWDKQHDMGHMMRCTCVGNGRGEWTCIPYSQLRDQCIVDDITYEVNQTFHKRHEEGH
MLNCTCFGQGRGRWKCDPIDQCQDSETQTFYQIGDAWEKFVHNVRYQCYCYGLGIGEWHC
QPLQTYPGATGPVQVIITESPNHPNSHPIQWNAPEPSHISKYILRWKPKNSRIRWKEATI
PGHLNSYTISGLKPGVIYEGQLISVQQYGLRELTRFDFTTAVISNTVVGETTPLTPMVAT
SESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGR
KYIVNVYQISEEGEQNLILSTSQTTAPDAPPEHAVESVEDTSIVISWSRPQAPITGYRII
YSPSVEGSSTELNLPDTATSVTLSDLMPGVQYNISIYAVEENQESTPVFIQQETTGVPRA
DDIPSPRDLQFVEVSDVKITIMWTPPESAVSGYRVEVIPVHLPGEHGQRLPITRSSFAEV
IDLLPGTTYVFKIFAVSHGRESKPLIGEQTTKLDAPTNLRFVNTTESSVLVTWTSPRAPI
SGYRLTVGPTRGGQPRNYNVGPSVIKYLLKNLKPGTEYTVYLVAVKDNQQSTRETGVFTT
LQPVGSIPPYHTEVTETSIVVTWTPAPRIGFKLGVRPSQGGEAPREVISESGSIVISGLT
PGVEYIYSISVLMDGEERESPIINSVVTPLSPPTTLHLEPNPDTGVLTVSWDRSTTPGIS
GYRITTVPTSGQQSYTLEEMVSAEQTYCTFENLSPGVEYNVSVYSVKGNQESIPISKTIT
QVEVPQLTDLSFVDITDTSIGLRWTPLNSSTIIGYRITVVAGGESVPIFEDFVDSSIGYY
TVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPAPTDLSFTSVGPDAMRVAWIPPTS
IVLSSFLVRYSPVKNEEDIAELTISPTDRSVYLQNLLPGTEYLVKVYSISEQHESVPLTG
VQKTGIDSPTGIDFSDITANTFTIHWIAPRATITGYRVRHQLEHGGGRPKEDRIPPSRNS
ITLTNLVPGSEYVVSIIAFNGREESLPLVGQQSTVSDVPQDLEVTPTSPTSLRISWDAPA
VTVRYYRITYGETGGSSPVQEFTVPGSVSDANISGLKPGVDYTITVYAVTGRGDSPASSK
PVTVTYKIEINTPSQMQVTDVQDNSISVRWLPSSSPVTGYRVTTVPKDGHGPTKTKTVPA
DQTEVTVEGLQPTVEYVINVYAQNQNGESEPLSETTVTNIDRPKGLTFTEVDVDSIKIAW
ESPQGQVTSYRVTYSSPEDGIHELLPAPDGEDDTAELHGLRPGSEYTVSIVALHDDKESQ
PLTGTQSTAIPSPTNLNFAQVTPTSLMVTWNAPNVRLTGYRVRVNPKEKTGPMKEINLSP
DSTAAVVSGLMVATKYEVSVYALKDSLTSRPAQGVVTTLENVSPPRRARVGDVTETTITI
NWRTKTETITGFQVDVIPASGQNPIQRTIKPDLRVYTITGLQPGTDYKIHLYALNDNARS
SPVVMDASTDVDAPSNLRFLTTTSNSLLVTWQPPRAKITGYIIKYSKPGAQPKELLPRPH
PGTTEATIIGLEPGTEYTIYITAVKNNQKSEQLIGRKKTDELPTLVTQTHPNQPEILDVP
SIDERPPYFTNNRYDNGNGIQLPGTTGQHPSIGHQGQQVFFEEHGFRRTTPPTTATPSKH
RPRPQPPNVDETVELTRYPIPHVVEPSYPHSRGPRRNGTSGQEALSRTTISWRPLLESTE
YLISCLPVGNDEETLQFRVPGTSSSATLAGLTRGATYNIIVEAIKDHRRQKVLEQVVTVD
NTVSEGLNQPTDDSCYDTYTGSFYSIGEEWERLSETGFKLWCQCLGFGSGHFRCDSSKWC
HDNGVNYKIGKKWDRQGENGQMMSCTCLGNGKGEFKCEPHEATCYDDGKMYHVGEQWQKE
YLGAICSCTCYGGQQGWRCDNCRRPNVDAASEGSSGHTYTHFTQRYHQSTNTNVNCPIEC
FMPLDVQADTQHPRGQ
NT seq 7431 nt   +upstreamnt  +downstreamnt
atgcccaggagccccgcggggcggcggctgctgctgctgctgctcttcgccctgtgcctg
ggggtgcgctgcacggagcgcacggcggccaaaagcaggaggcaagcccagcaaatcgtc
cagcccccagtgcccgccacccagagcaaacagggctgttttgacaatgggcgacactat
caaataaaccagcaatgggaacgcatttacctgggaaacacgctggtctgtacctgctac
gggggatccagaggctttaactgtgaaagcaaacctgaacctgaagaaacttgctttgac
aaatacactgggtctacttaccgagtaggggagacttatgagcgccccaaggattccatg
atctgggactgtacttgcattggagctgggcgtggaagaatcagctgcactatcgcaaat
cggtgccatgaagggggtcagtcctacaagattggtgatacgtggcgcagacctcatgag
acaggcggctatatgctagagtgtgtgtgtctgggaaatgggaaaggtgaatggacctgc
aaacctgtagctgagagatgctatgacaacaatgctggaacctcttacgttgttggagag
acttgggagaagccttatcagggctggatgatggtggactgcacctgcttgggtgaaggc
agtggacgtattacctgtacctccagaaatcggtgcaatgatcacgacaccaagacttcc
tacagaattggagatacatggagtaagaaggataaccgaggaaatctgcttcagtgcatc
tgcactggtaatggcagaggcgagtggaagtgtgaaagacacacatccctgcatactact
agcacaggatctgggtcttctagctttacagacgtacgaactgcactttaccagcttcaa
ccccagccccagccatatggccagtgtataactgataatggagtggtgtactcagttggc
atgcagtggctcaaaacacagggcagccagcagatgctttgtacttgtctgggcaatgga
gtcagctgcaaggagatagctgtgacacaaacctacggtggcaattccaatggagaacca
tgtgttttgccatttacctttgatgggagaaccttctattcttgcacaactgaagggcgt
acggatggccagctgtggtgcagcacaacctcagacttcgtgcaggacaggaaatactcc
ttctgcacagaacaaaacggtttggtccagacccgtggtggcaattcaaatggtgctttg
tgctacttccccttcctgtataacaaccgcaactacactgattgtacttctgagggacgg
agagacaacatgaagtggtgtggaaccacccctaactatgacgctgaccagaagtttggc
ttctgccctatggctgcccatgaagaagcctgtacaaccactgaaggtgtcatgtaccgt
gttggtgaccagtgggacaaacagcatgatatgggccatatgatgagatgcacttgtgtg
ggaaatggccgtggtgaatggacatgcattccatactcccagctcagagaccagtgtatt
gttgatgacatcacctatgaggttaaccagacatttcacaagcgtcatgaagaaggacat
atgctgaactgcacatgctttggccagggtcgtgggagatggaagtgtgatcctattgat
cagtgccaggattcagaaacccagaccttctatcaaattggggatgcgtgggagaagttc
gttcacaatgttagataccagtgctattgctatggccttggtattggagagtggcattgc
cagcctttgcagacctatccaggtgcaaccggtccagttcaggtgatcatcacagagagt
cccaatcaccccaactcccatcccatccagtggaatgcacccgaaccttctcacatttct
aagtacattctccgatggaaaccaaaaaactccagaatacgttggaaggaagccaccatc
cctggtcacttgaactcctacaccatctcaggcctgaaacctggtgtaatatatgaagga
cagcttatcagtgtgcaacagtatggactcagagaactcacccgctttgattttactaca
gctgtgatcagcaacacagttgttggagagacaactccacttactcctatggttgctacc
tctgaatcagtcacagaaatcacagccagtagttttgtagtctcctgggtttccgcttct
gacactgtatcaggattccgtgtggaatatgagctcagcgaggagggcgatgaacctcag
tatcttgatctcccaagcacagccacctctgttaacatccctgacttgcttcctggtcgc
aagtacatagttaatgtctaccagatctcagaagaaggagagcagaacctgatcctgtcc
acttcacagacaacagcaccagatgcacctccagagcacgcggtggaaagtgtggaagac
acctcaattgtcattagctggagcagaccacaggctcccattacaggttacagaattatc
tattcaccatcagtggaagggagcagcactgagctgaacctgcctgatactgctacctct
gtgaccctcagtgatttaatgcctggtgttcagtataatatcagcatttatgcagtggaa
gaaaatcaggagagtactcctgtctttatccagcaggaaaccacaggtgtcccacgtgca
gatgatattccttcacccagagatctacagtttgtggaagtttctgatgtcaaaattacc
atcatgtggaccccacctgagagcgctgtgtctggctatcgtgtggaggtgatcccagtt
cacctccctggtgaacatggacagcgactgcctattaccaggagttcctttgctgaggtc
attgaccttctacctggaacaacctatgtctttaagatctttgctgtgagccatgggagg
gagagcaaaccattgattggagagcaaaccaccaaacttgatgcccccaccaacctgagg
tttgtcaatactactgaatcttcagtgttggtgacctggacctcaccacgtgctccaatc
tcaggatacagactgactgtaggtcccacgagaggaggccagccaaggaactataatgtg
ggaccatctgtcattaagtacctattaaagaacctgaagcctgggactgaatatactgta
taccttgtggcagtgaaagacaaccagcaaagcaccagagaaactggggtcttcacaact
ttgcagccagtgggctcaatccctccctatcacacagaagtgacagaaacatccattgtg
gttacctggacacctgcaccaagaattggtttcaagctgggtgtgcgaccaagtcaaggt
ggagaagccccacgggaggtgatttctgaatctggtagcattgtcatatctggcttgact
cctggagtagaatacatctacagcatttcggtcctgatggatggcgaggagagagagagt
ccaattatcaacagtgtagttacaccattgtccccaccaactacccttcatttggagcct
aatccagacacaggagtcctgactgtatcctgggatagaagtaccactccaggtatttct
gggtacagaattaccactgttcctaccagtggacagcaaagttacaccctggaagaaatg
gtcagtgcagaacagacttactgcacctttgaaaatttgagccctggagtggaatacaat
gtcagtgtgtattcagtcaagggcaaccaggaaagcatccccatctccaaaaccatcaca
caagtagaagtgccccagctcactgacctaagctttgttgatataactgatacgagcatc
ggcctgaggtggaccccgctaaactcctccaccattattggttaccgcatcacagtagtt
gcaggaggagaaagtgtccctatttttgaagattttgtggactcctcaataggatactac
acagtcacaggcctggagccgggcattgattacgacatcagtgtaatcacacttattaat
ggtggagagagcgcccctaccactctgacacagcaaacggctgttcctgctccaactgac
ctgagcttcaccagcgtgggtcccgatgctatgagagtggcctggattcctccaacctct
attgtcctgagcagtttcctagtgcgttactccccagtgaagaatgaggaagatattgca
gagctgaccatttcacccactgacagatcagtatatttacaaaatctcctgcctggcact
gaatatctggtgaaggtctatagcatctctgagcaacatgaaagtgtccctttgactggt
gtgcagaaaacaggtattgattccccaacgggcattgacttttcggatataacagcgaac
actttcaccatccattggattgctcctcgtgctaccatcactggctacagagttcgacac
cagttggagcatggtggtggtagacccaaggaagaccgtattccaccttctcggaattcc
atcacactcactaacctggttcccgggtccgaatatgtggtcagcattattgctttcaat
ggcagagaagagagcttgcccttggtcggccagcaatctacagtgtctgatgttccacag
gacttggaagttactcccaccagccccacaagcctaaggatttcttgggatgctccagca
gtgacagtgagatactataggatcacctatggtgaaacaggtggaagtagccctgtccag
gagtttacagtgcctggctccgtatctgatgctaacattagtggccttaagcctggagta
gactataccatcacagtgtatgcagtaacaggccgtggagacagtcctgccagcagcaag
ccagtcactgttacgtacaaaatagagattaacacaccatcccagatgcaagtaactgat
gttcaggataacagtatcagtgtcagatggctgccttcatcttctccagtcacaggttat
cgagtgacaactgttcccaaggatggccatggtcccacaaaaactaaaactgtccctgca
gatcaaactgaagttactgttgagggcctgcagcccacagtcgagtatgtgattaatgtc
tatgctcagaatcaaaatggagaaagcgaacctctgtctgagacaactgttaccaacatt
gatcgccctaaaggactgacattcactgaggtggatgttgattccatcaaaattgcttgg
gaaagcccacaagggcaagtcaccagttacagggtgacctactcaagccctgaggatgga
atccatgagctattgcctgccccagatggtgaagacgacactgctgagctgcatggcctc
aggcctggttctgagtacactgtcagtatcgttgccttacatgatgacaaggagagccag
cccctgactggaacccagtccacagcaattccttctccaacaaacctgaactttgcccag
gtgactccaaccagcctgatggttacctggaatgcacctaatgttcgtctcaccggctac
agagtccgagtgaatcccaaggaaaaaacggggccgatgaaagaaatcaacctctcccca
gacagcacagctgctgttgtgtcaggattaatggtggcaaccaaatatgaagtcagtgtg
tatgctctgaaggactctctaaccagtcgaccagcccagggtgtcgtcactacccttgag
aatgtcagccctccccggagggcacgtgtaggtgatgttactgagacaaccatcacaatc
aactggcgcaccaagacagagaccatcactggtttccaggttgatgtcatcccagcaagc
ggccagaaccctattcaaaggactattaagcctgatcttagagtgtacaccattactggc
ttgcaaccaggcactgactacaagatccatctttacgcactgaatgacaatgcccgcagt
tccccagttgtgatggatgcttctacagatgttgatgctccttcaaacctgcgattcctc
acaaccacaagcaactccctgctggttacctggcagcctcccagggccaagattacaggc
tatatcatcaagtacagtaaacctggagcacagcctaaagagttgcttccccgaccacac
ccaggcaccacagaggccactataattggtctggagccaggaacagaatataccatctat
atcactgctgtgaagaacaatcaaaagagtgaacaattgattggcaggaaaaagacagat
gagcttcccacgctggtaacccaaactcaccccaatcagccagagattctggatgttcct
tccatcgatgagaggcctccttacttcacaaacaacaggtatgacaatggaaatggtatc
caacttccaggcaccacaggtcagcatccatcaataggacaccagggacagcaagttttc
tttgaggaacatggatttagacggactactccacccaccacagcaacccccagtaaacac
aggccaagaccgcagccaccaaatgtggatgaaacagttgaactcactaggtacccaata
ccacatgtagttgaaccttcatatcctcactcccgcgggccaaggcgcaatggcacttca
ggccaggaagctctttctcggacaactatctcctggaggcccttattggagagcactgaa
tatctcatctcatgtctcccagtcggcaatgatgaagagactttgcagttcagagttcct
ggaacttcctctagtgctacactggccggccttactagaggtgctacctacaacatcata
gtggaagcaataaaagatcataggagacaaaaagtgctggagcaggttgtcacagtagac
aatactgtgtctgaaggattaaaccagccaactgacgacagttgttatgatacatacact
ggctccttctattccattggagaggaatgggagcgattatctgaaactggctttaaactc
tggtgccagtgcttaggttttggcagtggtcatttcagatgtgattcatccaaatggtgc
catgataatggtgtgaactacaagattggcaaaaagtgggaccgtcaaggcgagaatgga
cagatgatgagctgcacatgtcttggaaatggaaagggagaattcaagtgtgaacctcat
gaggcaacatgttatgatgatggtaagatgtaccacgtgggagaacaatggcagaaggaa
tatcttggtgctatctgttcctgtacttgctatggaggacagcagggttggcgctgtgac
aactgccgtagacccaatgtcgacgcagcctcagaaggctcttctggccatacctacaca
cattttacacagagataccaccagagcacaaatactaatgtcaactgcccaattgagtgc
ttcatgcccttagatgtacaggcagacacacaacatccacgaggacaataa

DBGET integrated database retrieval system