Gavialis gangeticus (Gharial): 109301973
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Entry
109301973 CDS
T07453
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109301973 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109301973 (BARD1)
04121 Ubiquitin system [BR:
ggn04121
]
109301973 (BARD1)
03036 Chromosome and associated proteins [BR:
ggn03036
]
109301973 (BARD1)
03400 DNA repair and recombination proteins [BR:
ggn03400
]
109301973 (BARD1)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109301973 (BARD1)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109301973 (BARD1)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109301973 (BARD1)
DNA repair and recombination proteins [BR:
ggn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
109301973 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
Ank_KRIT1
zf-RING_5
ANK_LRRK2
RTT107_BRCT_5
NIBRIN_BRCT_II
Motif
Other DBs
NCBI-GeneID:
109301973
NCBI-ProteinID:
XP_019378940
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MQAALRARSGNRPPPPTMERPGRAWHHTRAALEQLEATLHCSRCDHVLREPVCLGRCEHV
FCLACVGDCVGTECPVCHTPAWVQDIQINRQLDNMIQLCSKLRQLLGTDPALPPDSAEDL
STSIRDNQDMGNKKQIKMWFSPRSRKIRCILNKNQEVTNADNISQDAPSVYDFSPSPSHE
KTCKQSKKPARGLTKKLKKKRLADFNKVWGIEKKKQKDASRPEEREASDEFSGKKVSFCS
QPLVGCTPEPKSTEKTLGQESVKETNFDKNGSKSYLEMSTQVKPVEDNDSNKVACPAEDT
IESDVTTGKPLPGGNKATLLKRGRQQSRSPALSHSKRPRTSEKSTSRQLVTQQSPQNCCT
NMPVADEDDSLVDISSPVYKHTGGTISKSKNSLVFKEINSPLVSKAESTPSTPNNCNQMA
VTQSPSLSKKYPAQSTTTKRNHKGETLLHVASIKGDLPAVELLLKNGADPNIKDHAGWTP
LHEACNHGHKKVVELLLQHGALVNTTGYHNDSPLHDAAKNGHVSIVELLLLHGASHNAVN
IFGLRPVDYAETEKMKSVLMLPGKSESSSFSQSVEQASPNRPKDGPVVLLGSSLGSDEQK
LLSKLSAVLKARRCVEFNSTVTHIIVPDDSIRSTFKYMMAILSGCWVLKFEWVKACLQSR
AREEEEKYEISGGPQKGRLNRIKLLPKLFDGCYFYFLGTFTCHQKKDLTELVKAGGGQIL
IRQPKPDSDVTQSINTVAYHAEPSSDQSFCTQYIIYDVSSKYKPDKVRQGKVWMAPSSWL
VDCVRSFQLLPVTM
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccgcgctacgggctcgctccggtaatcgccccccgccgcccaccatggagcgg
cccggccgcgcctggcatcacacgcgcgccgccctggagcagctagaggccacgctgcac
tgctcccgctgcgaccacgtgctgagggagcccgtgtgcctgggtcggtgcgagcacgtc
ttctgccttgcctgtgttggcgactgtgttggcacagaatgtccagtgtgtcacacgcca
gcctgggtacaagatatacaaataaacaggcagttagacaacatgattcagttgtgcagc
aaactacgacagctgctgggcacagatccagctcttccaccagattctgcagaagacttg
tccacatcaataagagataatcaagatatgggaaataagaagcagataaaaatgtggttc
agtccacgcagtagaaagattagatgcatcttgaacaagaatcaggaggtgaccaatgct
gataacatttcccaggatgcaccttctgtttatgatttctctccttccccttctcatgaa
aagacttgtaagcaaagtaaaaaaccagcacggggattaacaaaaaagctgaagaagaaa
cgcctagcagacttcaataaagtatggggtatagagaagaaaaagcagaaagatgccagt
agacctgaagagagagaagcctcagatgaattcagtggaaaaaaggtgtccttttgcagt
cagccattagttggctgcaccccagaaccaaagagtactgaaaagacattaggacaggaa
tcagtaaaggaaactaacttcgataaaaatggaagcaaatcatacttggaaatgtccaca
caagtaaaacctgtggaagataacgacagcaataaagttgcatgtcctgcagaagatacc
attgagagtgatgttactacaggtaaacccttaccaggaggaaataaagcgactctctta
aaacgtggaaggcagcagtcaagatcacctgctttgtctcattctaaaagacctagaaca
agtgagaagagcaccagtaggcagttggtcacccagcagtcgccacagaattgctgtact
aatatgcctgtggctgatgaagatgacagtctagttgatatttcttctcctgtatataaa
cacacaggtggcaccatatcaaaatcaaaaaactcgttggtttttaaagaaataaatagc
cctttggtatcaaaagccgagtctactccatccactcctaataactgtaatcaaatggca
gttacgcagagtccctctttgtcaaagaagtaccctgcccagagcacaactaccaaaaga
aatcataaaggagagactttgctccacgttgcttctattaagggtgacttaccagctgtt
gaacttctactgaaaaatggggcagaccctaacattaaagaccatgctggatggacacca
ttgcacgaggcctgtaatcatgggcacaagaaagttgtggaactactactacagcatgga
gcgctagtgaacactactgggtatcacaatgactctcctcttcatgatgctgccaagaat
ggtcatgtgagcattgttgagctgttgctcttgcacggagcttcccacaacgcggttaat
atattcggtttgcggcctgtggactatgcagaaactgaaaaaatgaagtctgtgctgatg
ctaccagggaagagtgaatcatcctcatttagtcaatctgtagaacaagcaagcccaaac
cgccctaaagatggacctgttgttctattggggagcagccttggttcagacgaacagaaa
ttactgagcaaactgtcagcagttctgaaggctagaaggtgtgtggagtttaacagcaca
gtgactcacattattgtccctgatgattcaatccgaagtactttcaaatatatgatggcc
attctgtctggatgttgggtcttgaaatttgaatgggtgaaagcatgtctgcaaagcaga
gctcgagaagaagaggagaagtatgaaatttctggtggtccacagaaaggcagactcaac
agaataaaattgctgcctaagttgtttgatggttgctacttctattttctgggaactttc
acctgtcatcagaagaaagaccttacagaactggttaaagcaggaggtggacaaatcctc
atcaggcagccaaagccagatagtgatgtgacacagagcatcaacacagtagcctaccat
gcagaaccgagttctgaccagagcttttgtactcaatatataatctatgatgtgtcttct
aaatataaaccagataaagttcgtcaaggcaaagtctggatggccccctccagctggctg
gtagattgtgtgaggtcatttcaactattgcctgtcacaatgtga
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integrated database retrieval system
