Gavialis gangeticus (Gharial): 109302118
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Entry
109302118 CDS
T07453
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109302118 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ggn03041
]
109302118 (DHX8)
Enzymes [BR:
ggn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109302118 (DHX8)
Spliceosome [BR:
ggn03041
]
Complex C
Other components
Step II factors
109302118 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
ABC_tran
PhoH
TsaE
Sigma54_activ_2
OB_RRP5_4th
Cas3-like_C_2
Transformer
Motif
Other DBs
NCBI-GeneID:
109302118
NCBI-ProteinID:
XP_019379186
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MGDLVGAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVINLAEKNTTFDAFKAVLLK
NGAEFTDSLVSNLLRLIQTMRPPAKPSTSKEAIIKPKTEKEKMKELFPALCRPDNPNIRA
MLDEDDVKVAADALKELEALMPNADVREKQRNSDHRAKRRRRSRSRSRDRDRKRRHRSRS
RSHSRTRDKNKAKSRYRSRSRSPSPSRDRKDREDYSVKSKDRWRDKHVDRPPPEEPSIGD
IYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSF
TGSKTSLSMKDVDQDTGEDLNPNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDTL
ERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEP
PFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLN
THWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLP
IFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVAAMSV
AKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDE
AHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEI
LYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPE
LIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYN
SKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLA
STVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLE
PMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLL
AVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKA
ICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVT
TIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgggggacctggtgggcgccgaggagctcgcgaagctcgagtacctgtcgctggtgtcc
aaggtgtgcacggagctggacaaccacctcggcatcaacgacaaggatctggcggaattt
gtgataaatcttgctgagaaaaacactacatttgacgcattcaaagctgtccttttaaag
aatggcgccgagttcacagactctcttgttagtaatttgttacgcctcatacagacgatg
cgtcctccagccaagccatctacaagcaaagaggcaattattaaacccaaaacagaaaag
gaaaaaatgaaggaactgttcccagctctttgcaggccagataatcccaacatcagagct
atgctggatgaggatgatgtgaaagtggcagctgatgctcttaaagaacttgaagcttta
atgcctaatgctgatgtgcgggaaaaacaaaggaatagtgaccacagggcaaagaggagg
aggagaagtcgcagtcgcagcagggatagggacaggaagcggaggcaccgatcacgttcc
aggtcccattctaggactcgggataagaataaagcgaaatctaggtatcgctcacggagc
aggagcccaagtcccagcagggaccgtaaggaccgagaggactattctgtgaagagcaaa
gatagatggagagacaagcatgtggatcggcctccacctgaagagccttccattggagat
atttacaatggcaaagtcacgagcataatgcagtttgggtgctttgtgcagctggaagga
ctaaggaaacgctgggaaggcttggtccatatttctgagcttcgcagagagggacgtgtt
gctaatgttgctgatgttgtgagcaaagggcaaagagtaaaggtcaaagttttgtccttt
actgggtccaaaaccagcctgagtatgaaggatgttgatcaagatactggggaagactta
aatccaaaccgacgcagaaacctggttggagagaccaatgaagagacttccatgaggaac
ccagacagacccagtcacctctccttggtgaatgcccctgaagtggaagatgataccctt
gaaaggaaacgcctcacccggatttcagaccctgaaaaatgggaaatcaaacagatgatt
gctgctaacgtgctctccaaagaagagtttccagactttgatgaggagactgggattctc
cctaaagttgatgatgaggaagatgaggaccttgagattgagctggttgaggaagagcca
ccattcttgcgaggacataccaaacaaagtatggatatgagtcccatcaaaatagtgaag
aatcctgatggctccttgtcccaagctgcaatgatgcagagtgcattagccaaagaaagg
cgagaacttaaacaagcccaaagggaagcagagatggactctatccccatgggactcaac
actcactgggtggatcctcttcctgatgtggatgggagacaaatagctgccaacatgcgg
ggtattgggatgatgcccaatgatatcccagagtggaagaaacatgcatttggtggcaac
aaagcttcatatggtaaaaagacccaactttccataattgagcagagggagagtctccca
atctttagacttaaggagcagctaattcaggcagttcatgacaaccaaatcctgattgtt
atcggagagacaggctctgggaaaacaacacagatcactcagtacctggctgaggcaggg
tatacgacaagaggaaaaattggatgtacccagcctcgcagagtggctgcgatgtctgtt
gccaagagagtgtcagaagaattcggttgctgtttgggacaagaggttggctacacaatt
cgatttgaagactgcaccagccctgagacagtcatcaagtacatgacagatggtatgtta
ctgcgggaatgtctcattgatcctgacctaacccagtatgccatcatcatgctggatgag
gcccatgagaggactatacacactgatgtgctctttgggctgctgaaaaagacagtgcag
aaacggcaagatatgaaacttattgtaacatcagcaacgttagatgctgtgaaattctcg
cagtatttctatgaagctccaatcttcacgatccctggcagaacatatccagtggaaatt
ctgtacacaaaagaaccagagacagattatctggatgccagtctgatcacagtcatgcag
atccatttaacagagcctccaggtgacatcctggtgttccttactggtcaggaagagatt
gacactgcatgtgaaatcctctatgagagaatgaagtcactaggacctgatgtgccagag
ttaattatcctgccagtatattcagctttacccagtgagatgcaaaccagaatctttgac
ccagctcctccaggcagtcggaaggttgtcattgctaccaacattgctgagacttctctg
actattgatggaatctattatgtggtggatcctgggtttgtgaaacagaaagtttataat
tcgaagactgggattgatcagctggttgttacaccaatttcccaggcccaagcaaagcaa
cgagcaggaagagctgggagaacagggccaggaaaatgttacagactttacacggagcgt
gcttatcgagatgaaatgttgaccaccaacgtgcctgaaatccagagaactaacttggcc
agtacagtgctctctcttaaggctatggggatcaatgatctgctctcctttgactttatg
gatgctcccccaatggaaaccttaatcaccgccatggaacagctatataccttgggagct
ctggacgatgagggactactcactcgacttgggcgcagaatggcagagtttcctttggag
ccaatgttatgcaagatgttgatcatgtctgtacatttgggctgcagtgaggaaatgtta
actatagtctctatgctgtctgtacagaatgtgttctacagaccaaaggacaaacaagcg
cttgctgaccagaagaaagccaagtttcatcagacagaaggcgaccatctcaccctgctg
gctgtttacaactcttggaagaataataagttttcgaacccctggtgctatgagaatttt
atccaggctcggtctttgcggagggcacaggatatccgtaaacaaatgctgggaatcatg
gacagacacaagctggatgtggtatcctgtggaaaggcaacagttcgagtccagaaagca
atctgtagtggtttcttccgaaatgcagcaaagaaggatccccaggaaggctaccggact
ctcattgaccagcaggtggtctatattcacccgtctagtgctctcttcaaccgacagcca
gaatgggtggtgtatcatgaactggtgctgaccacaaaagagtatatgcgtgaagtgacc
accattgatccacgctggctggtggaatttgcaccagctttcttcaaggtctccgatccc
actaagctgagcaaacagaagaagcagcagcggctggagcccttgtacaatcgttatgag
gagcccaatgcatggaggatctcacgtgcattcaggcgtcgatga
DBGET
integrated database retrieval system
