Gavialis gangeticus (Gharial): 109302194
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Entry
109302194 CDS
T07453
Symbol
TDP2
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggn03400
]
109302194 (TDP2)
DNA repair and recombination proteins [BR:
ggn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
109302194 (TDP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
UBA_4
Exo_endo_phos2
UBA_8
TAP_C
Motif
Other DBs
NCBI-GeneID:
109302194
NCBI-ProteinID:
XP_019379307
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MRTRVGGVGSGALECGERESAGAMEAAGAGGDQGQPPAEDALPGQGVAELAQRKQLLCAE
FSCITAAGPNVAERRLEEHGWDLQRALDSFFEPPVHERDVSGTPDNGACIDLTAVVTTDS
AGVSTADFLQQEDDSSFSLITWNIDGLHLENLQDRARGVCSYLALYSPDVVFLQEVIPPY
LSYLQKRAVSYTVIPGNIDGYFTAILLKNSRVKLVKQEIIPFPTTSMMRNLLVVHATVSG
NDLCLMTSHLESTKDHSEERINQLKLVLKMMQEAPESSTVIFGGDTNLRDREVTKIGGLP
NNVLDIWEFLGKPAHCRYTWDSGSNTNLGVSFKCKLRFDRIFFRAAAAAGGQLIPRSLDL
LGLEKLDCGKFPSDHWGLLCNFDVIL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacccgagtcgggggtgtgggaagtggggcgctggagtgcggagagcgggaaagc
gcgggggcgatggaggcagccggggccgggggcgaccaggggcagccgccggcggaagat
gcgctgccggggcagggcgtagcggagctggcgcagcgcaagcagctgctgtgcgctgag
ttctcctgcatcacggccgcggggccgaacgtggccgagcgccgcctggaggagcacggc
tgggacctgcaaagggcgctggactccttctttgagccaccagtgcacgagcgggatgtg
agcgggacacctgacaacggcgcctgcattgacctgacagcagttgtgactactgacagt
gctggagtcagcacagcagacttcctacaacaagaagatgacagcagcttctctctaatt
acgtggaacattgatggtttacatctagaaaatctccaagacagagcgagaggagtctgt
tcttatttagcattgtacagtccagatgtggtgtttctacaagaggttattccaccatac
ctctcctatctgcagaagagagctgtttcttacacagtaattccaggtaatatagatggt
tatttcactgccattctgctgaaaaactcaagagtaaaattagtaaaacaagaaataata
ccctttccaacaacttccatgatgagaaacctattagttgtgcatgcgactgtatctggt
aatgacctctgtcttatgacttcccatcttgagagcacgaaagaccattcggaagaacgc
ataaaccaactgaagctagtattaaagatgatgcaggaggcaccggagtcaagcactgtt
atatttggaggggatacaaacctaagagaccgtgaggttactaagataggtgggttacct
aacaacgttcttgacatctgggagtttctgggcaaacctgcacactgccgctatacgtgg
gactcgggctccaacaccaacctgggtgtctcattcaagtgtaaattgcggtttgatcgc
atattcttccgtgctgcagcagcagcaggagggcagcttattccacgaagcttggaccta
cttggattagaaaaattagactgtggcaaatttcctagtgatcactggggtcttctctgc
aattttgatgtgatactataa
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