Gavialis gangeticus (Gharial): 109302226
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Entry
109302226 CDS
T07453
Symbol
NUP58
Name
(RefSeq) nucleoporin p58/p45
KO
K14307
nucleoporin p58/p45
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109302226 (NUP58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109302226 (NUP58)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109302226 (NUP58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Tox-ODYAM1
Mitofilin
PSY3
Nup49_C
NET2A_C
FAN1_TPR
HNF-1_N
GAIN_ADGRA3
Motif
Other DBs
NCBI-GeneID:
109302226
NCBI-ProteinID:
XP_019379334
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MPTPRSDSASPPPRGPGSSPPATPRRRAAAGGGARERPAGIPSAPACEQQLRPGAASPSS
TGGLNFGTLGSSTATATTSAPSAGFGSGLFGSKPSTGFTLGGTNTGTATTIATGLTLGAP
ATTSASTTGFSLGFNKPAGSATPFALPITSTSAGGLSLSSALTSTPAAGSGGFTLNLGGT
TAATTTAPTGLSLGGALAGLGGSLFQNTSTAATGLGQNALSLSLGTTAAPSTTVNEGLGG
IDFSSSSDKKSDKTGTRQEESKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSK
AMLKVQEDIKALKQLLSVVASGLQRNTLNIDKLKMETAQELKNAEIALRTQKTPPGLQHE
NTAPADYFRILVEQFEIQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVA
LAAQLQSIHENVKMLKDQYLGYRKTFLGDAIDVFEARRTEAKKCQSAQRVTTGPTPFSNI
PNAAAVAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQSSGLGSSSLGGFGSSSA
FGSNATGSSSFGFGATNKPSGSLSAGFGSSSTSGFNFSNPGITASAGLTFGVSHPATAGF
GTGGQLLQLKKPPAGNKRGKR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgccgactcctcggagcgactccgcctccccgcccccgcggggcccggggagctcccct
ccggccacgcctaggcgccgcgcagcagcagggggcggggccagggagcggcccgcggga
attccctccgctccggcttgcgagcagcagctacggcccggagccgcctcgcccagctca
acagggggacttaattttggcaccttgggttcctccactgctacagcaactacatcagct
ccttcagcgggttttggaagtggactttttggatcaaaaccctcgaccgggtttacgcta
ggaggtactaatacaggaacagcaacaactattgctacaggattgacactgggagctcct
gccacaacatctgcctctaccaccggttttagtttaggattcaacaagcctgctggttca
gccacaccatttgctctgcctattacttctacctcagcaggtggcctctcactttcttct
gctctgacatcaactcctgcagctggttctggtggctttacgttaaatttgggtggtaca
actgccgcaactacaactgcacctacaggtctatctctaggaggagcattagctggtttg
ggaggttctctgttccagaatacaagcacagcagcaacaggtcttggacagaatgctttg
agtttgagtttggggacaacagcagctccttcaactactgttaatgaaggtcttggtggc
atagattttagtagctcttcagataaaaagagtgacaaaacgggaacaagacaagaagag
agcaaagcgctaaaggatgaaaatctacctccagtaatctgccaagatgtagaaaatctc
cagaagtttgtgaaggaacaaaagcaagttcaggaagaaattagcagaatgtcttcaaaa
gcaatgcttaaagtacaggaagacattaaagctttgaaacagcttttatctgtggttgcc
agtggactacagagaaatactcttaatattgacaagttgaaaatggaaactgcccaggag
ctaaaaaatgcagaaatagcactaagaacacagaaaactcctcctggtcttcaacatgaa
aatacagccccagcggactacttcaggatattggttgaacagtttgaaatacagctgcag
caatacaggcaacagatagaagaactggagaatcatcttgccacacaagcgaacaattca
catataactccacaagatttgtctatggccatgcagaaaatttatcagacatttgtagct
ctagctgcacaacttcaatcaatacatgaaaatgtaaagatgctcaaagaccagtacctt
gggtacaggaaaacttttctgggagatgccattgatgtgtttgaggcaagacgaacagaa
gctaagaaatgtcagagtgcccagcgtgttactactggaccgacccctttcagcaacata
ccaaatgcagcagccgttgccatggctgcaacacttactcagcagcaacagcctgctaca
gggccacagccatctctgggagttagttttggaacaccattcggctcaggtattggcact
ggcttgcaatcaagtggcttaggttcttcaagccttggaggatttggaagtagttctgct
tttggaagcaatgctacaggctcatcatcatttggatttggagctacaaataaaccctca
ggaagtcttagcgcaggctttggcagctcgagtacatctgggttcaacttcagcaatcct
ggcatcacagcatcagctggtctgacattcggggtgtctcatcctgcaactgcagggttt
gggacaggagggcaacttcttcagttgaagaaacctccagctggaaacaagagagggaaa
agataa
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