Gavialis gangeticus (Gharial): 109302325
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Entry
109302325 CDS
T07453
Symbol
DSCAM
Name
(RefSeq) Down syndrome cell adhesion molecule
KO
K06767
Down syndrome cell adhesion molecule
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ggn04515
]
109302325 (DSCAM)
Cell adhesion molecules [BR:
ggn04515
]
Immunoglobulin superfamily
DSCAM family
109302325 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
Ig_4
C1-set
Sp38
V-set_CD47
Interfer-bind
fn3_2
C2-set_3
ChitinaseA_N
DUF6377
ARM_TT21_4th
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
109302325
NCBI-ProteinID:
XP_019379431
LinkDB
All DBs
Position
Unknown
AA seq
2045 aa
AA seq
DB search
MSMVTVLKTSHSGSLKVMVSIALFSSREEEILLCEGSHTLDEMSEVAFACLVFSEDLHAS
LYFVNASLQEVVFASTTGTLVPCPAAGIPPVTLRWYLATGEEIYDVPGIRHVHPNGTLQI
FPFPPSSFNNLIHDNTYYCTAENPSGKIRSQDVHIKAVLREPYTVRVEDQKAMRGNVAVF
KCIIPSSVEAYITVVSWEKDTVSLVSGSRFRITSTGALYILDVQNEDGLYNYRCITRHRY
TGETRQSNSARLFVSDPANSSPSILDGFDHRKAMAGQRVELPCKASGHPAPKYRWLKDSV
PWEPDSRFQQTVTGLVIEDTRPSDSGKYVCEVWNNYGTAEMIGRLYVKQPLKATISPRKV
KSSVGSQVSLSCSVTGTEDQELSWYRNGEIINPGNNVRITGINRENLIMDGMAKSDGGAY
QCFVRKDKMSAQDYVQVVLEDGTPKIISAFSEKVVSPGEPVSLMCNVKGTPLPTITWTLD
EDPIIKDGSHRISQIITSEGNVVSYLNISNTQVRDGGVYRCTANNSAGVVLYQARINVRG
PASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNSKLLPFNHRQVAFENNGTLKLSN
VQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFESPRFSIGQRVFIPCVVVSGD
LPITITWQKDGRPIPDSLGVTIDNIDFTSSLRISNLSLLHNGNYTCIARNDAAAVEHQSQ
LIVRVPPRFVVQPSDQDGIYGKAVILNCSAEGYPVPTIVWKYSKGAGVPQFQPIALNGRI
QLLTNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQ
KKEMSCTAHGEKPIIVRWEKEDRIINPEMSRYLVSTKEVGDEVISTLQILPTVREDSGFF
SCHAINSYGEDRGIIQLTVQEPPDPPEIEIREVRARSIALRWTMGFDGNSPITGYDIECK
NKSDSWDSVQRTKDVSPQLNQATIIDLHPSSTYNIRMYAKNRIGKSEASNELTITTDEAA
PDGPPQDVQLEPISSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSAGGNFQFNIISIDTT
GDSEVYTLNNLKKFTQYGMVVQACNRAGIGPSSQEIITTTLEDVPSCPPGNVQATATSPE
TISISWSTLAKEALNGILQGFRVIYWANLMDGELGEIKNVTTTQPSLELDGLEKYTNYSI
QVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASASTVFVSWLPPLKLNGIIRKYT
VFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVWVVAVTAAGRGNSSEIITVEPLAK
APARILTFSGTVTTPWMKDIILPCKAVGDPSPTVKWMKDSNGTPSLVMTDGRRSIFSNGS
FVIRTVKAEDSGYYSCVATNNWGSDEIILNLQVQVPPDQPRLTVSKTTSSSITLSWIPGD
NGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLETLKCGTWYKFTLTAQNGVGPGRIS
EIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCPITSFTLEYRPFGTTVWTT
AQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQAKFATLNYDGSTIPPLIKSVVQS
EEGLATNEGLKMLVTISCILVGVLLLFVLLLIVRRRRREQRLKRLRDAKSLAEMLMSKNT
RTSDTLNKQQQTLRMHIDIPRAQLLIEERDTMETIDDRSTVLLTDADFGETSKQKSLTVT
HTVHYQSVSQATGPLVDVSDARPGTNPTTRRSAKTGPTARNRYASQWTLNRPHPTISAHT
LTTDWRLPTPRAAGSVDKESDSYSVSPSQDTDRARSSMVSTESASSTYEELARAYEHAKM
EEQLRHAKFTITECFISDTSSEQLTAGTNEYTDSLTSSTPSESGICRFTASPPKPQDGGR
VMNMAVPKAHRPGDLMHLPPYLRMDFLLNRGIPGTSRDLGLGQACLEPQKSRTLKRPTVL
EPIPMETSSTREVQSWQPGAVATLPQREGAELGQAAKMSSSQESLLDSRGHLKGNNPYAK
SYTLV
NT seq
6138 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggttacagtattaaaaacttcacattctggaagtctaaaagtaatggtttcc
attgctttgttctcaagcagagaggaggagatactgctttgtgaggggtctcatacactg
gatgaaatgtctgaagttgcttttgcttgtctagttttcagtgaagatctacacgccagc
ctatattttgtcaatgcatctttgcaagaggtagtgtttgctagcaccacaggaactctg
gtgccctgtcctgcagcagggatccctcctgtgacactcagatggtacctagcaacgggc
gaggagatctatgatgtcccagggatccgccacgtccaccctaatggcactctccaaatt
ttccccttccctccttcgagctttaataacttaatccatgataacacttactattgcaca
gctgaaaatccttcagggaaaatcagaagtcaggatgttcacattaaggccgttttacgg
gaaccctatactgtccgtgtggaggaccagaaagccatgagaggcaatgtagcggtcttc
aagtgcattatcccctcctctgtggaggcatacatcactgttgtctcatgggagaaagac
acagtctcacttgtctcaggatctagatttcgcatcacgtccacgggagccttgtatatt
ttagatgtacagaatgaagatggattgtataattaccgatgtatcacacggcacagatac
actggagaaacacgacagagcaacagcgcaagactttttgtatcagacccagcaaactcc
tctccatctattctggatgggtttgaccatcgtaaagccatggcagggcagcgagtggag
ctgccttgcaaagcatcggggcacccagcaccaaagtatcggtggctgaaggacagtgtt
ccttgggagccagacagcaggtttcagcagacagtcacaggactagtgattgaagacaca
cgtccttcagattcaggcaaatatgtttgtgaagtgtggaacaattatggtactgctgaa
atgatagggcgcctctacgtaaaacaaccactaaaagccacaatcagcccacggaaagtt
aaaagcagtgttggtagtcaagtgtccttgtcctgtagtgtaactgggacagaagaccaa
gaactctcttggtatcggaatggtgaaatcatcaaccctgggaacaatgtgaggatcact
gggatcaaccgagagaacctcattatggatggcatggccaaaagtgatgggggagcatac
cagtgctttgtgcgtaaagacaagatgtctgctcaagactacgttcaggttgtgctggaa
gatggaacacctaagatcatttctgccttcagcgagaaggtggtgagcccaggagaacct
gtctcccttatgtgcaatgtgaaggggacccctctacctacaatcacctggactctagat
gaagatcccataatcaaagatggcagtcatcgtatcagccagattatcacctctgagggg
aatgtggtcagctacctgaatatctctaacactcaggtccgagacggcggagtttatcgc
tgtacggctaacaactctgctggagtcgtcctgtaccaggctcgaataaacgtaagaggg
ccagcaagcattcgaccaatgaaaaacatcacagcaatagcgggacgggatacctacatt
cattgtcgtgtgattggctacccatattactccatcaaatggtacaagaattctaaattg
cttccttttaaccaccgccaagtagcgtttgaaaataatggaacgctgaaactatcaaat
gtgcagaaggaagtggatgaaggggaatatacatgcaatgttttggttcaacctcagctg
tccaccagccagagtgtacatgtcactgtaaaagttccacctttcatccagccttttgag
tctccaagattctccattgggcagcgagtcttcattccatgtgttgtagtctcaggggat
ttgccaatcacaataacctggcagaaggatggcagaccaatcccggacagtcttggagtt
accattgacaacattgacttcaccagctccttaaggatttctaatctttcactgctgcat
aatgggaattacacctgtatagcaagaaacgacgcagcagctgtggagcaccaaagccaa
ttaattgtgagagttccccctcgatttgtggttcaaccaagtgaccaagatgggatttat
ggaaaagctgtaatcctcaattgttctgcagaaggttatcctgttcctactattgtctgg
aagtattcaaaaggtgctggtgtaccccaattccagccaattgccttgaatgggcgaatc
cagcttctcacaaatggctccttgttgattaaacatgtgctggaggaagacagtggatat
tacctctgtaaggtcagcaatgatgtgggagcagacgtcagcaagtcaatgtacctcact
gttaaaattcctgcaatgataacttcctatccaaacaccaccttagcaacacagggtcag
aaaaaagagatgagctgcacggcacatggagagaaacccatcatagtccgctgggaaaaa
gaggatcgaattattaaccctgaaatgtcccgctatcttgtttctaccaaggaggtgggc
gatgaagtgatctctactctgcagattttaccaactgtgcgtgaagattctggcttcttt
tcctgccatgctatcaattcctatggagaggaccgtggaataattcagctcactgtgcaa
gagcccccagacccgcctgaaatagaaatccgagaggtgagagcacgcagcattgccctc
agatggaccatgggatttgatgggaacagcccaatcacaggctatgatattgagtgcaag
aacaagtctgactcctgggattctgttcagagaaccaaagatgtttctcctcagctgaat
caagccactatcattgacctccatccttcctccacctacaacattcgcatgtatgccaaa
aatcgcattggcaagagtgaggccagcaatgagctcactatcacaacagatgaagcagct
cctgatggcccacctcaggatgttcagcttgagcccatatcttcacaaagcattagggtc
acctggaaggctccaaagaagcatttgcaaaatgggattattcgcggataccagataggt
taccgggaatacagtgcagggggcaatttccaattcaacatcatcagtattgataccact
ggggacagtgaagtttataccttgaataacctgaaaaaattcacccagtatggcatggtg
gtacaggcttgtaaccgggctggaataggaccttcttctcaggaaatcatcaccactacc
ttagaggatgtgcccagttgccctccagggaatgtccaagccactgctacatcaccagaa
accatctctatttcctggtctacacttgccaaagaagccctgaacgggattctacaggga
ttcagggttatctactgggctaatctcatggatggagagctgggagagattaaaaatgtc
actactactcagccctcgctagagctcgatggcttggaaaaatatactaactacagcatt
caagtgctggcattcacacgagctggagatggagtcaggagtgagcaaattttcacccgc
actaaggaggatgttccaggtcctcctgctggagttaaagcagctgcagcttcagcctcc
actgtatttgtgtcctggctccctccccttaagttaaatggcatcatccgaaagtacacg
gtgttctgctcacatccgtatcccacagtaatcagcgagtttgaagcctctcctgactca
ttttcctacagaattcccaacctgagtcggaatcgacaatacagtgtctgggtggtggct
gtgactgctgctggaagaggcaacagcagtgaaattatcactgtggaaccattagctaaa
gctccagccagaattttgacattcagtggcacagtaacaactccatggatgaaggatatc
attcttccttgcaaggccgttggggacccatcacctacagtcaaatggatgaaggatagt
aacgggacacccagtctagtgatgactgatgggcgaagaagcatctttagcaatggcagc
tttgtcatccgaactgtgaaagcagaggattctggatattacagctgtgtggccactaac
aactggggatccgatgaaataatcttgaatttgcaggtgcaagttccaccagaccagcct
agacttactgtgtccaaaaccacatcttcctctatcactctttcctggatacctggagac
aatggtggcagttctatccgaggctatatactccaatactcagaggataacagtgagcag
tggggtagttttcccattagccccagtgagagatcctaccgcttagagactttgaaatgt
ggcacttggtacaaattcacactaactgctcagaatggagtgggaccagggcgtatcagt
gagatcattgaagccaaaacacttggaaaagagccccagttttccaaagaacaagaactc
tttgccagtattaacaccactagagtgcgattgaaccttattggctggaatgatggtggt
tgtccaatcacctcctttactctggagtacaggccatttggaactacagtatggacaact
gcacagcggacatccctttccaagtcttacatattgtatgacctccaggaggcaacttgg
tatgagctgcaaatgagagtatgcaatagtgctggctgtgcagagaaacaagccaaattc
gcaacactcaactatgacggcagtacaatccctccactcattaaatcggttgtccaaagt
gaggaagggctggcaaccaatgaagggctaaagatgctggtgaccatttcctgcatcttg
gttggggtcttgctgctgtttgtgctcctgctgattgtacgaaggagaaggagggaacag
agactgaaaagactcagggatgcaaaaagtttggctgaaatgcttatgagtaagaatacc
aggacatcagatacacttaacaagcagcaacagacactgaggatgcacatagacattccc
agggctcagcttctgattgaggagagggacaccatggagaccattgatgacagatcaaca
gtcctattaactgatgctgattttggagaaacatcaaagcagaagtcattgactgtcact
catactgtacattaccagtctgtctcacaagctactggacctttagtggatgtttctgat
gcccggccaggaacaaatcctaccacaagaagaagtgcaaaaactggccccacagctcgc
aacagatatgctagtcaatggactctcaacagaccccatcccaccatatcggcccacacc
ctcaccacagactggaggctgccaacacccagagctgcaggatcagtggacaaagaaagt
gacagctacagcgtcagtccctcacaggacacagatagagcaagaagcagtatggtgtct
acagaaagtgcctcctctacttacgaagagttagcaagagcctacgagcatgctaagatg
gaagagcagctgagacatgccaagttcaccatcacagaatgctttatatcggacacatca
tcagaacagttaacggcagggactaatgagtatacagacagtctgacctcaagcacacca
tcagaatcggggatctgcaggtttactgcatcaccccctaaacctcaggatggagggcgt
gtgatgaacatggcagttccaaaggcacatcggccaggtgatctcatgcatttgccacca
tatcttagaatggactttttgttaaaccgtggcattccaggcacaagcagagacctgggt
ttggggcaagcctgcttggaacctcagaaaagccgaaccttgaagcgtcccacagttctg
gagcccataccgatggagacatcctctacaagagaagtacagtcgtggcagccaggtgct
gtggcaacattacctcagcgagaaggtgctgagctgggacaggcagctaaaatgagcagc
tcccaagaatccctgctagactcccggggccacttgaaaggaaataatccctacgcaaaa
tcttacaccctggtataa
DBGET
integrated database retrieval system
