Gavialis gangeticus (Gharial): 109302499
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Entry
109302499 CDS
T07453
Symbol
APP
Name
(RefSeq) amyloid beta A4 protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109302499 (APP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ggn01002
]
109302499 (APP)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ggn00535
]
109302499 (APP)
00536 Glycosaminoglycan binding proteins [BR:
ggn00536
]
109302499 (APP)
Peptidases and inhibitors [BR:
ggn01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
109302499 (APP)
Proteoglycans [BR:
ggn00535
]
Cell surface proteoglycans
Others
109302499 (APP)
Glycosaminoglycan binding proteins [BR:
ggn00536
]
Heparan sulfate / Heparin
Others
109302499 (APP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
P23-45_portal_barrel
Prominin
Motif
Other DBs
NCBI-GeneID:
109302499
NCBI-ProteinID:
XP_019379588
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MFCGKLNMHMNVQNGKWASDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQ
NWCKRGRKQCKSQPHIVVPYRCLVGEFVSDALLVPDKCKFLHQERMDICETHLHWHTVAK
ESCSEKSMNLHDYGMLLPCGIDKFRGVEFVCCPLTDESDNVDSADAEEDDSDVWWGGADA
DYADGSDDKVVEEQPEEEEEVTDVEDEDADDDDDDGEEVEEETEEEYEEATERTTSIATT
TTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDSEE
YCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWE
EAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRIALE
NYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHL
RVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALM
PSLTETKTTVELLPVDGEFSLDDLQPWHPFGVDSVPANTENEGSGLTNVKTEEISEVKMD
AEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIH
HGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgttctgtggcaagctcaatatgcatatgaatgttcagaatggaaaatgggcatccgac
ccctctgggaccaagacttgcattggaacaaaagaagggattctgcagtattgccaggaa
gtttatcctgaactgcaaattaccaatgtggttgaagccaaccagcctgtgacaatccag
aactggtgcaaaaggggacggaagcaatgcaagagtcagcctcatatcgtggttccctac
aggtgcttggttggtgaattcgtgagtgatgcccttctggtgccagataagtgcaagttc
cttcaccaggaaaggatggatatatgcgaaacccacctgcattggcacacggttgcgaaa
gagtcctgtagtgaaaagagtatgaatctgcatgattacggaatgctgctgccctgtgga
attgacaagttccgtggtgtggagtttgtgtgctgtccattaacagatgaaagtgacaat
gttgattcagctgatgctgaagaagatgattccgatgtctggtgggggggtgcagatgca
gactatgcagatggaagtgatgataaggtggtagaagaacagccagaggaagaggaggaa
gtaacggatgtggaagatgaagatgctgatgatgacgatgatgatggtgaggaggttgaa
gaggagacagaggaagagtatgaagaagctactgaaagaactaccagcattgctactact
accactacaactacagaatctgtagaagaggttgtcagagaggtgtgctctgaacaagct
gagactggtccttgccgagcaatgatctcccgctggtactttgatgtgactgaaggaaaa
tgtgcaccattcttttacggcggatgtggtgggaaccgcaacaactttgactctgaggaa
tactgcatggcagtctgtggcagcgtcatacccaccacagctgccagcactcctgatgct
gttgataagtacttggagacacctggtgatgagaatgaacatgcccatttccagaaagcc
aaagagaggcttgaagccaagcaccgtgaacgcatgtctcaggtcatgagggaatgggaa
gaagcagaacgccaagcaaagaacttgccaaaggctgataagaaggcggttatccagcat
ttccaagagaaagtggagtcactggaacaagaagcagcaaatgaaagacagcaactagtg
gagacccacatggccagggtagaagccatgctgaacgaccgtcgccgtatcgctctggag
aactacatcacagctctccaggctgtccctcctcgtcctcgccatgtattcaacatgctg
aagaaatatgtacgggccgagcagaaagacagacagcacaccctcaaacactttgaacat
gtccgcatggtggatccaaaaaaagctgcccaaatcaggtctcaggttatgacacaccta
cgtgtgatatatgaacgcatgaaccaatctctttcccttctttacaatgtaccagcagtt
gctgaggaaattcaagacgaagttgatgaactgcttcagaaagaacaaaactattctgat
gatgtcttggccaatatgatcagtgagcccaggatcagctatggaaatgatgcccttatg
ccttcattgactgaaactaagacaactgttgaacttcttccagtggacggagaattcagc
ctagacgaccttcagccatggcatccgtttggtgtggattctgtcccggctaacactgaa
aatgaaggttctgggctgaccaatgttaaaacagaagagatctctgaagtaaagatggat
gcagagttccgacatgattcagggtatgaagtgcatcatcaaaagttggtgttctttgct
gaagatgtaggttcaaacaaaggtgccatcattggactaatggtgggaggtgttgttata
gcaacagtgattgtcattactttggtgatgctgaagaagaaacagtacacatccatccat
catggtgtagtggaggtggatgctgcagtgacaccagaggaacgccacctttccaagatg
cagcaaaacggctatgaaaatccaacgtacaagttctttgaacagatgcagaactag
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integrated database retrieval system
