KEGG   Gavialis gangeticus (Gharial): 109302539
Entry
109302539         CDS       T07453                                 
Symbol
CUL4A
Name
(RefSeq) cullin-4A isoform X1
  KO
K10609  cullin 4
Organism
ggn  Gavialis gangeticus (Gharial)
Pathway
ggn03420  Nucleotide excision repair
ggn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ggn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109302539 (CUL4A)
  09124 Replication and repair
   03420 Nucleotide excision repair
    109302539 (CUL4A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ggn04121]
    109302539 (CUL4A)
   03400 DNA repair and recombination proteins [BR:ggn03400]
    109302539 (CUL4A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ggn04147]
    109302539 (CUL4A)
Ubiquitin system [BR:ggn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     109302539 (CUL4A)
DNA repair and recombination proteins [BR:ggn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109302539 (CUL4A)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109302539 (CUL4A)
Exosome [BR:ggn04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109302539 (CUL4A)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW ADH_zinc_N
Other DBs
NCBI-GeneID: 109302539
NCBI-ProteinID: XP_019379658
LinkDB
Position
Unknown
AA seq 731 aa
MADEPRKKPHLTALVGHTNGLTKAAALAGSRVGSGGGAAAASKKLVIKNFRERPKLPDNY
TQDTWQKLHEAVRAIQSSTSIKYNLEELYQAVENLCSYKVSATLYKQLRQVCEEHVKAQI
FQFREDFLDSLLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELF
RNHIISDKLVQNKTIDGILLLIERERNGEAVDRSLLRSLLSMLSDLQVPEYLHHVSKRLE
EEGDRVITYLDHSTQKPLIACVEKQLLGEHLTAILQKGLDNLLDENRISELTQTYQLFSR
VKGGQQILLQHWSEYIKNFGTTIVVNPEKDKDMVQELLDFKDKVDHIIEVCFQKNEKFIN
LMKESFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELERILDKIMIIFRFIHGKDV
FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDVMVQF
KQYVQNQSDPGGIDLTVNILTMGYWPTYTPMEVHLTSEMVKLQEVFKTFYLGKHSGRKLQ
WQTTLGQAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDEFSFEEIKMATGVEDSELRRTL
QSLACGKARVLIKNPKGKDVEDEDKFIFNGDFKHRLFRIKINQIQMKETVEEQVSTTERV
FQDRQYQIDAAIVRIMKIRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERD
KDNPNQYHYVA
NT seq 2196 nt   +upstreamnt  +downstreamnt
atggccgacgagccgcgcaagaagccgcacttgacggcgctggtgggccacaccaatggc
cttaccaaggctgcggcgctggcagggagccgtgtcggctcggggggaggcgctgccgcc
gcctccaagaagctggtgatcaagaacttccgagaaagacctaaattgcctgataattac
actcaggacacatggcagaagcttcatgaagcagtgagagctatacaaagtagtacctct
attaaatacaaccttgaagagctctaccaggctgttgaaaacctctgctcttataaagtg
tctgctacactgtacaagcaattgcgacaggtctgtgaagaacatgtaaaagcacaaatc
tttcaattcagagaagattttctggacagtcttttatttttaaagaagatagataaatgc
tggcaagatcattgcagacaaatgatcatgattagaagtattttcttatttttggatcgt
acatatgtacttcagaattcaatgcttccttctatatgggatatggggctagaacttttt
agaaatcacattattagtgataaattagttcaaaacaaaaccattgatggaatcctcctc
ctgattgaacgagaacgaaatggtgaagctgtcgacagaagtttgttgcgaagcttgttg
agcatgctgtctgatttacaagtcccagaatatcttcaccatgttagcaagcgtttagaa
gaagaaggtgacagagttataacttatttagaccacagtacacagaaaccactaattgct
tgtgtggagaagcaactactaggagaacacttaactgctattttgcaaaaagggcttgat
aacctgcttgatgaaaacagaatatcagaacttacacagacatatcagctgttcagccgg
gtaaaaggtgggcagcagatcctgttgcaacactggagtgaatacatcaagaattttggg
acaacaatagtggttaatcctgaaaaggacaaggatatggtgcaagagctactagatttt
aaggataaagtggaccatatcatagaagtgtgctttcagaaaaatgaaaaatttataaac
ttgatgaaggaatcctttgaaacatttatcaacaagagaccaaataagcctgcagaattg
atagcaaaatatgtggattcaaagttgagagctggcaataaagaagcaacagatgaagag
ctggaaaggatacttgacaaaatcatgataatatttcgattcattcatggcaaagacgtg
tttgaagcattttataagaaagatttggccaaaagactgctggttggaaaaagtgcttca
gtagatgctgagaaatcaatgttgtcaaagcttaaacatgaatgtggtgctgctttcact
agcaaactggaaggcatgttcaaggatatggaactgtcaaaagatgtcatggttcagttt
aagcagtatgtacagaaccagagtgatccaggcggtatagacctgacagtaaatatacta
actatgggatactggccaacttatacccccatggaagttcacttaacttcagagatggtt
aagcttcaggaggtgtttaagaccttttaccttggaaaacacagtggtagaaaacttcag
tggcaaaccactttaggacaagctgtcctgaaagcagagtttaaggaaggaaagaaagag
tttcaagtatcactcttccagacattagtactgcttatgtttaatgaaggagatgaattc
agttttgaagaaattaaaatggctactggtgtagaggacagtgaattgcgaagaaccttg
cagtctttggcctgtggtaaagcacgagtattgattaaaaatccaaaaggcaaggatgta
gaagatgaagacaaattcatctttaatggtgatttcaagcatagattgtttagaatcaag
attaaccagatacagatgaaagaaacagttgaggaacaggtgagcacaactgaaagagta
tttcaagacagacaatatcagattgatgctgctattgtacgaataatgaagataagaaag
acacttggtcataaccttcttgtttctgaattgtataatcagctgaaatttccagttaag
cctggagacttgaaaaagaggattgaatctctcatagatagagactatatggagagagac
aaagacaaccccaatcagtatcactatgttgcataa

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