Gavialis gangeticus (Gharial): 109302610
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Entry
109302610 CDS
T07453
Symbol
PAN3
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109302610 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109302610 (PAN3)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109302610 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
109302610 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
109302610
NCBI-ProteinID:
XP_019379777
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MDGGGIADAGLTDSYFSTSFIGVNGFGSPAEAKYPMMQRMTNSSSSPSLLNESAKQYAGH
DPLTSPNSSLFNDFAALSLSQRRKPRKYRLGMLEERIVPVGSKARKSKNTIGCLADRCKT
GVPINMVWWNRVTENNLQTPNPTASEFIPKGGSTSRLSNVSQSSMSAFSQALFSHPSMGS
PATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPANYMVPTSASTSVANAVSQ
PPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIYPPTAPHVAYMQPKANAPSFFM
ADELRQELINRHLITMAQIDQADIPAVPTEVDSYHSLFPLEPLPPLNRIQKTSNFGYITS
CYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSL
VFAYDFHAGGETMMSRHFNDPSADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLS
SALRTIHTAGLACRVMDPSKILVTGKTRLRVNCVGIFDVLTFDNSQNNPLALMAQFQQAD
LMSLGKVVLALACNCVSGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIM
PMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETG
DRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYS
DLKRCFENTFQELIAAANGQL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggatggtggtgggatagccgatgctggtctcacagattcctacttcagcaccagcttc
attggcgttaatggatttggaagtcctgctgaagcaaaatatcccatgatgcagaggatg
acaaatagcagcagttcccctagccttctcaatgaaagtgccaagcagtatgcaggccat
gatccactaacttcaccaaattcatccttgtttaatgacttcgctgccctcagtctatct
cagaggaggaagccaaggaagtatcgtctggggatgctggaggagaggatagttccggtg
ggatcaaaagcacgaaaatcaaagaacactattggctgtctggctgacaggtgtaaaaca
ggagtgcccatcaatatggtttggtggaacagagtcacagaaaacaatttacagacacca
aatcctactgcaagcgagtttattcctaaaggaggatcaacctccaggctgagtaatgtg
tcccagtctagtatgtccgccttctctcaagccttgttttctcacccctccatgggaagt
cctgctactgctggactagctccaggaatgtcactgtctgcaggatcgtctcctcttcat
tctcctaaaattactcctcatacatctcctgctcccagaagaagaagtcatactcctaat
ccagcaaattatatggtgcctactagtgcctctacttctgttgctaacgccgtctcccag
cctccatctagtggtcaggtgattcagaaggaaactgtgggtggaacaacatatttctac
acagatacaactccagcacccctcacaggaatggtatttccaaactatcatatttaccct
ccaactgcacctcatgttgcttatatgcagccaaaagcaaatgcaccttccttcttcatg
gcagatgaactcagacaggagctgatcaacagacatttaataacaatggctcagattgat
caagctgatattcctgcagtccctacggaagttgacagctaccacagccttttcccttta
gaaccactgccaccactcaatcggatacagaaaacaagcaactttgggtatataacatca
tgctacaaagctgtaaatagcaaagatgatctaccatattgccttcggaggatacatggt
tttcgtcttgttaatacaaaatgcatggtattggttgatatgtggaaaaaaattcaacat
tcaaatattgtaaccctgcgtgaagtatttaccactaaagcatttggagaacattctctt
gtgtttgcatacgattttcatgctggaggagaaactatgatgagcagacactttaatgat
ccaagtgctgatgcctatttcacgaaaaggaagtggggtcagcatgatggacctctgccc
cggcagcatgctgggctacttccagagtctcttatttgggcatatattgtgcagctcagc
tccgcactgcgaaccattcatacagcaggattggcatgtcgagttatggacccatcgaag
attctggtaactggcaaaacaaggttacgtgtgaactgtgttggaatctttgatgtttta
acatttgataacagtcaaaataatccactggcactcatggctcagtttcagcaagcagat
ctgatgtccctaggaaaagttgtgttggcattggcttgcaattgcgtatcaggaatacag
agagaaaacttgcagaaagctatggaattggtgacaatcaactattcctctgatctgaag
aatctaattctgtatttgctgactgaccaaaacaggcttcgcagtgtaaatgatatcatg
cctatgattggtgcacgattctatactcagttggatgctgctcaaatgcgaaatgatgtt
atagaggaagaccttgcaaaggaggtgcaaaatggaaggttatttaggcttctagcaaaa
ttgggaacaatcaatgagaggccagagtttcagaaagacccaacttggtcagaaactgga
gacagatatttactaaagctctttcgagatcaccttttccatcaggtgacagaagcgggt
actccttggattgacctcagtcacattatctcatgtcttaacaagttagatgctggtgtg
ccagaaaaaataagcctcatttccagagacgagaagagtgtacttgtggtaacttacagc
gatttaaaacgctgctttgaaaatacttttcaagaactgattgcagccgcaaatggtcag
ttgtag
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