Gavialis gangeticus (Gharial): 109302615
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Entry
109302615 CDS
T07453
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggn03021
]
109302615 (SCAF4)
03041 Spliceosome [BR:
ggn03041
]
109302615 (SCAF4)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109302615 (SCAF4)
Spliceosome [BR:
ggn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
109302615 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109302615
NCBI-ProteinID:
XP_019379786
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSR
HQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDM
AAGTSSTAPMAENTSNNEGSPPPPAKVPSEPPQVTANSVPTVPQLPSSDAFAAVAQLFQT
TQGQQLQQILQTFQQPPKPQSPVIDNTVMAHVQAITAQLKTTATQPPEQKAAFPPPEQKT
SFDKLLDRFDYDDEPEAVDDSKKEDTTPSPSISQPAFGFPGEGMPPPVYPQLPNIDPFQQ
RMIGMQQDPIRHQVPLPPNGQMPSFGLLPTPQFPPMAQPVIPPTPPVQQTFQTPFPVQSE
PPHMQKTHQQEMEVEQPPVQEGKRHVSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRS
RSRSRDRRRHSPKSRSQERRERERERERRSKGLPQIKPETVSVCSTTLWVGQLDKRTTQQ
DVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNFKVNQKSIKIAWALN
KGIKPDYKQYWDVELGVTYIPWDKVKPEDLESFCEGGVLDNETLSPEWKGIPKKSENEVA
QNGGAETTHTEPVSPIPKALPVPIPVPMPAPITVPPPQVPPHPSGPPVVGALQPPAFTAP
MGIPPPGFAPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSVPVSVPHTPPVN
IPNSTATGVSEDTTKDASVGNPIPTVVSGSRGNSETSDSSKMYATVPPPVAPTNVPAPAS
QPMPAPVSQPMPLLGTQGVAPPPAPVVGLQTPSTGLLGARPGLIPLQRPPGIPPPPLQRF
PLMPPRHMPPHMLHRGPPPGPGGFGMPPPHGMKNPFPPPGPFVRPGGGMSGSGGSGGPED
NRDGRQFRNDRQTFGSNRDQERYGRRSFGNRVENDRERYGNRNDDRDHERLGNRERREWG
RRSPERDRHRDLEDRNRRSSGHRDRERDSRDRESRRDKEENRGKEKPELTDRADGDNNHE
SHSGKVENADIVSELNTGASEPTGVKPNEALTSEATSSVEQAAKDIGSVVEAPR
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaaccacctatttcccgagcaaagatgattctcattactaaagctgccatt
aaagctattaagctctacaagcatgtagttcagattgtagagaaatttatcaaaaagtgc
aaaccagaatacaaagttcctggattgtatgttattgactctattgttcgtcagtctcgt
caccagtttggaacagataaggatgtttttgggccaagattctctaaaaatataaccgcc
acattccagtatttatacctctgtccatctgaagacaagagtaagatagttcgtgttctg
aacctttggcagaaaaatggagtgtttaaaatagagatcattcagcctcttctggatatg
gcagcaggaactagtagtacagccccaatggcagaaaatacctctaataacgaaggttca
ccaccccctccagcaaaggttccctctgagccacctcaggttactgctaattcagtacct
actgtgccacagttgcccagttctgatgcctttgctgctgtagcccagttgtttcagaca
actcaaggacagcagcttcagcagattcttcagacttttcagcaacctccaaaaccccag
tctccagtcatagacaatactgtcatggcacatgttcaagctattactgctcagttgaaa
actacagcaacacaaccaccagagcaaaaagctgcttttcccccacctgagcaaaaaaca
tcttttgataagctgctagatcggtttgactatgatgatgaaccggaagcagtggatgat
tcaaaaaaagaagatacaacaccttctccttccatttctcaaccagcctttggatttcca
ggagaaggtatgccaccaccagtatatccacaactcccaaatatagatccgtttcagcag
cgaatgataggaatgcaacaggatccaatacgccaccaggttccacttcctcccaatgga
caaatgccaagttttggacttctacctacgccacagtttcctcctatggctcagcctgta
atacccccaacaccacctgtgcagcaaacttttcagactccttttccagtacaaagtgag
ccaccacacatgcagaaaacacatcagcaggaaatggaagtggaacagccccctgttcaa
gaaggaaagcgacatgtttctgataacagaaagtcaagatctagatctgcttcaagatcg
cccaagagaagacgatcaagatctggatctcggtctcgacggtcacgtcatcgtcgttct
cgctcccgatctcgggataggcgccggcactcgccaaagtctcgatctcaggagagacgt
gaacgagagagggagagagaacgcagatcaaaaggccttcctcaaatcaagccagaaact
gttagtgtttgtagtactacactttgggtaggacaactggacaaaagaacaactcagcaa
gatgttggaagtcttttggaggagtttggcccaattgaatctataaatatgataccacct
agaggatgtgcctatattgtaatggttcacagacaagatgcttatcgtgccctacaaaaa
ttgagccgaggcaacttcaaagtcaatcagaaatctataaagatcgcatgggctttaaat
aaaggaattaaaccagattataaacagtattgggatgtagaattaggtgttacctatatt
ccctgggacaaagttaagcctgaagatcttgaaagtttctgtgaaggaggagtgttggat
aatgaaacgcttagtccagagtggaaaggaattcctaagaaatctgagaatgaagttgct
caaaatggaggtgcagaaaccacacatactgagccagtgtcaccaatacctaaagcttta
cctgttccaattcctgttcccatgcctgcaccaataactgtgcctcctccacaggttcca
ccacacccatccggccctcctgtagttggtgctctccagccacctgctttcactgctcca
atgggaatcccacctcctggatttgcccctggggttcctcccccaccaccacctccattt
ttacgacctggattcaacccaatgcatttgccaccaggttttcttcctcctgggccacca
ccacctataacccctccagtatctgttcccgtatctgttcctcacactccaccagtaaac
atcccaaactctactgcgactggtgtaagtgaagacactacaaaggatgcatctgttgga
aatcctattccaacagtagtttctggatctagaggaaattctgaaactagtgatagttcc
aaaatgtatgcaactgttcctccaccagtagcaccgactaacgtacctgctcctgccagc
caacctatgcctgctcctgtcagccaacctatgccacttctgggtactcaaggagttgca
ccaccacctgctcccgtggttggattacagaccccctctactggactccttggggcacgg
cctggtttaataccactccagcgacctcctggaataccaccaccacctctgcaacgcttt
cccttgatgccaccacggcatatgcctccccatatgttacatagaggtccaccccctggg
ccagggggctttggcatgcctccgcctcatggaatgaaaaacccatttccaccacccggc
ccctttgttaggccaggtggagggatgtcaggaagtggaggatcaggtggacctgaggat
aatagagatggaaggcagtttaggaatgataggcagacattcggttctaacagagaccag
gaaaggtatggaaggagatcttttggaaatcgggtagaaaatgatcgcgagcgctatggt
aaccgcaacgatgacagggatcatgagcgacttggtaatcgtgaaaggagagaatgggga
agaagaagccctgaacgcgacagacacagagacttagaggacagaaatcgacggtccagt
ggacaccgagacagagagagagattctagagatagggaatctcgcagagacaaggaagaa
aatcgaggaaaggagaaacctgagctgacagacagggcagatggtgacaacaaccatgaa
tctcacagtggcaaagtggaaaatgcagacattgtttcagaacttaatacaggagcgtct
gaacccacaggtgtaaaacctaatgaagcgttaacatctgaggctacctcatctgttgaa
caagcagcaaaggatattggctcagttgtagaggctcctcgttag
DBGET
integrated database retrieval system
