Gavialis gangeticus (Gharial): 109302630
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Entry
109302630 CDS
T07453
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
109302630 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ggn01009
]
109302630 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ggn04515
]
109302630 (PCDH9)
Protein phosphatases and associated proteins [BR:
ggn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109302630 (PCDH9)
Cell adhesion molecules [BR:
ggn04515
]
Cadherins
Protocadherins
109302630 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
MAP17
V_ATPase_I
EphA2_TM
RCR
DUF6249
7tm_3
DUF6377
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
109302630
NCBI-ProteinID:
XP_019379806
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVRVSSTTGEIFTTSNRIDREKLCAGVSYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGLPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQVNEHFYWS
ISTAYKCPINQY
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttgaggctggattct
gctatagctcaagaacttatttacactattagagaggagctgcctgaaaatgtgcccata
gggaacataccaaaggatctgaacatttctcatatcaatgctgccacagggaccagcgct
agcctcgtctacagactggtctctaaagctggggatgcccctttggttagagtgtccagc
accaccggagaaatcttcaccacctcaaatcgaatagacagagaaaaactctgtgctgga
gtctcctatgctgaggaaaatgagtgtttctttgaacttgaagtggtgattctccccaat
gacttctttaggctgatcaaaataaaaatcatcgtaaaggataccaatgacaatgcaccc
atgtttccatctcctgtcatcaacatctccataccagaaaacactttgatcaacagccgc
tttccaattccatcagccacagatcctgataccgggttcaacggggtgcagcactatgag
ttgttaaatgggcagagtgtctttggactggatatcgtggaaactcctgaaggagagaaa
tggcctcaactcattgtgcagcagaacttggatagagagcagaaagacacctatgtgatg
aaaattaaagtagaagatggagggagccctcagaaatccagcacagccatactgcaagtc
acagtaagtgatgtcaatgataacaggcctgtttttaaagagagtcaggtggaggttcat
atccctgagaatgcccctgtgggtacctctgtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatatatttttggtgcccaagttgcccctgcaaccaaa
agactctttgctctaaacaacactacaggactgataacagttcagaggtccttagatcga
gaagagactgctattcacaaggtgacagtgctggcaagtgatggcagctctactccagct
cgggcaactgttaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacattataagtcctatcaatggcacagtgtacttgtctgagaaagatcctgtcaat
acaaagattgccctaattacggtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcattgagagagaggtcccatttcacttgaaggcagtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctggcaagcccagtctgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccaattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccgtcgcggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcggaag
acaggtgttttaacagcctccagagtttttgacagagaagagcaagaacgtttcattttt
actgttacggccagggacaatggcacccctcctctgcagagtcaggcagctgtgattgtt
actgtactggatgaaaatgacaacagtcccaaatttactcataatcactttcagtttttt
gtatctgagaatttaccaaagtatagtactgtgggggtgatcacagtgactgatgcagat
gcaggggaaaataaagcagtgaccctttccatcctgaatgacaatgagaactttgtgctg
gatccttactctggagttatcaagtccaatgtttcttttgatcgagaacagcagagctct
tacacctttgatgttaaggccgttgatggaggactgcctcctcgttcttctacagcaaaa
gtaacaataaatgtaatggatgttaatgataatagcccagttgtgatttacccaccttct
aatacttcatttaagctggtgccactctcggcaatcccaggctcagtagtagcagaagtg
tttgctgtggatatagacactggaatgaatgctgagcttaaatatacaattgtgagtgga
aataacaaaggtttatttcgtattgatccagtgacaggtaacattactctggaagaaaaa
ccaactcctactgacgtggggctgcatcgtctagttgtcaacataagtgatttgggttat
cctaaatccttgcatactcttgtgcttgtatttttgtatgtaaatgacactgctggaaat
gcctcttacatttatgacctgatacgcaggactatggaaacgcccttggaccggaacata
ggggacagtagccaaccctatcaaaatgaggactatcttaccatcatgattgctatcgtg
gcaggtgcgatggttgtcatagtggtgatatttgtcacggttctggttcgctgtcgacat
gcgtctaggttcaaagcagcacagaggagcaagcaaggtgctgaatggatgtctcccaat
caggagaacaagcagaacaagaaaaagaaaaggaagaaaaggaagtctcctaagagctct
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgattgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgaccttgcaaagcattacaaa
tctgcttccccacagtctgcttttcatcttaaacctgacactccagtttcagtgaaaaag
catcatgtgattcaggaacttcccttggacaacacctttgttggtggttgcgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacaggtaaacgagcacttttactggtct
ataagtactgcatacaagtgcccaatcaaccagtattaa
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integrated database retrieval system
