Gavialis gangeticus (Gharial): 109302707
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Entry
109302707 CDS
T07453
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109302707 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109302707 (NUP98)
03036 Chromosome and associated proteins [BR:
ggn03036
]
109302707 (NUP98)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109302707 (NUP98)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109302707 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
109302707
NCBI-ProteinID:
XP_019379982
LinkDB
All DBs
Position
Unknown
AA seq
1818 aa
AA seq
DB search
MFNKSFGTPFGGTAGFGTTSTFGQNAGFGTTSGGAFGASAFGSNNNTGGLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGGLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGATASLFGSSAATSSAATG
LFGSTTTNTGFSYGQNKTGFGTSTTGFGTGTAGGLFGQQPQTTSLFNKPFGQATTTQNTG
FSFGNTSTLGQPNTNTMGLFGATQPTPSGGLFGTTANTNAGTGFGTGTGLFGQANTGFGV
GGSTLFGNKPATFGTTTTSAPSFGTTTGGGLFGNKPTLTLGTNTNTSNFGFGANTAGTSL
FGNKPTTGSLGTGLGTGFGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTGTLGF
GAPQPAVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPA
AQKALTTPTHYKLTPRPATRVRPKALQTSGSAKSHLFDGLDDDEPSLSNGAFMPKKSIKK
LVLKNLSSSNLFSPVSREAEDLASPSEYPENGERFNFLSRSIDENHRQDGEPEEDDDHHE
VTRFYTNPIAKPIPQTPENAVHKHQNSVDDTIVALNMRVALRNGLEGSSEDASYHEESLQ
DDREDETENVHHLHPAGIVLTKVGYYTIPSMEELAKLTNDRGECILTDFTIGRKGYGSIY
FEEVNLTNLNLDEIVHIRRKEVIVYPDDERKPPVGEGLNRRAEVTLDGVWPTDKTSRCLI
KSPEQLMDMNYEGRLEAVSRKQGAQFKEYCPETGSWVFKVAHFSKYGLQDSDEEEEEEHS
SKADTKKLKTAPVPPQGQPVPQQMALNGKPAPLSQSPEVEQLGRVVELDSDMTDITQEPA
QDSMLEDSMTEDQEPVPASTHIASSLGINPHVLQIMKASLLADEEDLDLILDRHFGKQST
KMDTSQEICSPRLPISALQGQKKRSSVGGLLQSKFASVSLLPSASLQDSHGPRTSSFGKP
PPPAPWSVFSPLASVFTVPAAAPEPQVKTVGARRQQGLVPLEKSITYGKGKLLIDMALFM
GRSFRVGWGPSWTLINCGDQVSGSSEANHLRNTSMEYGFLPAPVPPKSLSESSFKVHIEK
LNLEQKKTEGDKQLYLLPLEIKLKHSTVHLDDYCPFIAPNPGVAAIHDYADWVREVSGHP
AEIENVVKNWGLTWTLCEAIWGNLKELEASLEEPSEYILTLERRKAFSRWLSQTAAGRIE
EEVSLSRHDNHIEAVFSYLTGKRISEACRLAQESGDYRLALLLSQLVGSQEVRELLTMQL
VDWHRLQADCFIQEERLRIFALLAGKPVWQLSERKSINICSQLDWKRCIAIHLWYLLPPT
ASISKALGMYEAAFQNTLESEKYACCPLPPYLEDLGCVLEEDDSTNRPLRDVCFHLLKLY
SDRHYDLHQLLDPRSITSDPLDYRLSWHLWEVLRALNYTHLSEQCQGVLNASYAAQLESK
GLWEWAIFVLLHTSNAHTREKAVRELLTRHCVLSETSESWTKEAFLMQKLCVPPEWIHEA
KAIRASMEGDKHKEALYLFRAGHWNQCHKLVIRHLASDAIINENYKYLKGFLEDLSPPER
STLIQDWDTAGLVYLDYIRVIEMLDRIQQLDCSTYELERLHTKVTSLCNRIEQIQCHSAK
DRLAQSDMAKRIANLLRVVLILQHSPEPASDSTPDLQRVPLRLLAPHIGRLPMPEDYALE
ELRSLTQSYLRELTVVTQ
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggaactccatttggaggcactgctggctttgggactacttca
acctttggacaaaatgctggctttggtactaccagtggaggagcatttggagcatcagcc
tttgggtcaaacaataatacaggaggcctctttgggagcacacagaccaaaccaggagga
ttgtttggttcgacaacatttaatcaaccagccacctcctccacaagcactggctttggg
tttgggacctcaacgggaacttcaaacagcttatttgggacaaccagcactggtggaggt
ctcttttcatcccagaataatgcctttgcacagaataaaccagctgggtttggaaacttt
gggacaagtaccagcagtggaggtctctttggaaccactaacactacctccaatcctttt
gggagtacatctggctctctctttggcccaactagctttaccgctgctccaactggcacg
actattaaatttaatccaccaactggcacagatactatggtaaaatctggagttagtact
aacatcagcaccaagcaccaatgtattactgctatgaaggagtatgaaagcaaatcctta
gaggaactccgtttggaagattaccaagcaaacaggaaagggccctcaaacccagtggga
gcaggagcaactgcaagtttatttggatcctctgcagccacatcaagtgctgctactgga
ctgtttggctccaccaccactaacacaggcttttcctacggacagaataaaactggcttt
ggaaccagtacaactggctttggcacaggaacagctgggggtctctttggtcagcaacct
cagacaactagtctgttcaataaaccgtttggccaggccacaacaacacagaacaccggt
ttctcttttgggaacaccagcactcttgggcaaccaaacacaaatacaatgggtttattc
ggggcaacccaacccacaccatcaggaggcctttttggaacaactgccaacacaaatgct
ggtactggatttggaactggaactggtctctttggacaagccaacacaggattcggtgtt
gggggttcgaccctgtttggtaacaagcctgccacgtttggaaccaccacgaccagtgct
ccttcgtttggtacaaccactggcggcgggctctttggtaacaaaccaaccctgacttta
ggaaccaatacaaacacttccaattttggttttggtgcaaacactgctggcactagtctg
tttgggaataagcctacaactgggtctctgggaactggactcggaactggatttgggaca
gctcttggtgcaggccagacttcattatttgggaacacccagcctaaactaggtggaacc
ctgggaaccggagcatttggagcaccgggattcaacacgtcaacgggtactctgggcttt
ggagctcctcaacctgctgtggcactgactgaccccaatgcttcagcagcccagcaagca
gtccttcagcagcaccttaacagcttgacctattcaccttttggagattctcctctcttc
agaaaccccatgtcagacccgaaaaagaaagaagagagattgaaaccaaccaacccagct
gcacagaaagctttgactacacccactcactacaaactgacccctcgtcctgcaactcga
gtgagacccaaagctctgcagacttcgggctcagccaaatctcacctctttgatggtctg
gatgatgatgagccctccctgtccaacggtgctttcatgcccaagaagagcatcaagaag
ctggttttgaaaaacctcagcagcagcaacctgttttctcctgttagtcgcgaagctgaa
gacctggcctctccatcagagtatccagagaatggagagcggttcaactttctgtcccgc
tctattgatgagaaccacagacaggatggtgagccagaggaagacgacgatcatcacgaa
gtgactaggttttacacaaaccccattgccaaacccatcccacagaccccagagaacgct
gtgcacaaacaccagaacagtgtggatgataccattgtggctctgaatatgcgggttgcc
ttgcgaaatggactggaaggcagcagtgaagatgcctcgtatcatgaagagtctttgcag
gatgaccgtgaagatgagactgagaacgtgcatcatctgcacccagcaggaattgttctc
acaaaagttggctactataccatcccatctatggaggagctggccaagcttaccaatgac
agaggagagtgtatcttgacagatttcaccataggtcgtaaaggttatggatcaatttac
tttgaagaagtgaacctaactaatttaaatctggatgagattgtgcacatccgtaggaaa
gaagttattgtctaccctgatgatgaaaggaaaccacctgttggtgaaggtttaaatagg
cgagcagaggttacgttagatggagtttggccaacagataagacatctcgttgcttgata
aagagccctgaacagctaatggatatgaattatgaaggcagactggaggccgtatctcgg
aaacagggagctcagttcaaggagtactgtccagagactggttcttgggtgtttaaggtg
gctcatttctctaaatatggcctgcaagattctgacgaggaggaagaggaagagcattct
tcaaaagcagacacaaagaagttaaaaactgctccagtgccaccccaggggcagccagtg
ccccagcagatggccctgaatgggaaaccagcaccgctgtctcagagcccagaagtggaa
cagctggggagggtggttgaactggacagtgatatgacagacatcacccaggaacctgcc
caagactccatgctggaagattctatgacagaagatcaggaacctgtgcctgcatcaaca
cacattgcatcctcactgggcataaacccccacgtgttacagatcatgaaagcttctttg
ctggctgatgaagaggatttagacttgatcctagatcgtcattttggcaaacagtctacg
aaaatggatacttctcaagaaatctgctcgcccagacttccaatttcagcattgcaagga
cagaagaaacgctcttcagttggtggattgctgcaatcaaaatttgccagcgtctctctc
cttccaagtgcctctttacaagattctcatggaccaagaacttcctcttttggcaaaccc
cctcctccagcaccttggtctgtgttttccccacttgcctctgtgttcacagtccctgct
gcagccccagagccacaggtgaagacagtgggtgcccgcaggcagcaggggctggtacct
ctggagaaatccattacctatggaaaaggaaaactcttgatagacatggcactcttcatg
ggacgctcgtttcgggttggctggggacccagttggactcttatcaattgtggagaccaa
gtgagtgggtccagtgaagcaaaccatcttcgcaacacatctatggaatacgggttcttg
ccagctcctgtccctcccaaatcgctttcagaatcttccttcaaggttcacatagagaag
cttaacttggaacaaaagaagacagagggtgacaagcaattatacctcctacctctggag
ataaaactcaaacacagcactgtccatttggatgattattgtcctttcatagcccccaac
ccaggagtggctgccattcacgactatgctgactgggttagagaggtctccggacaccct
gcagaaattgaaaacgtagtgaagaattggggtctgacgtggactctgtgcgaggcaatc
tggggcaacctgaaagagttggaagccagtttggaggagcccagcgagtacatcttgacc
ctggagcgcaggaaagccttctcgcgctggctatcgcagacagcagctgggcgaatcgag
gaggaggtctcgctctcgcggcacgataaccacattgaggctgtgtttagctacctcact
gggaagcggatcagcgaggcttgtaggttggcacaagagtcaggtgattacaggcttgct
ctactcctctcccagctggtgggcagccaggaggttcgggagctcctcaccatgcagtta
gtggactggcacagactgcaggcagactgcttcatccaggaagagaggttacgcatcttt
gctctgcttgctggaaagccggtgtggcagttatctgagaggaaaagcattaatatttgc
tcacagctggactggaagcgttgtatagctatccatctctggtacctgcttccgcctaca
gcttccatttccaaggcactcggcatgtatgaggcagcgttccagaacacgttggagtct
gagaagtatgcctgctgtccccttcctccctatctggaggacttgggctgtgtacttgag
gaagatgacagcacaaacaggcccctgcgagatgtctgctttcatctgttaaagctctac
agtgacaggcattatgatctccatcagctgctggaccccaggagtataacgtctgacccc
ttggactaccgtctcagttggcacctgtgggaagtgcttagagccctgaattacacacac
ttatcggaacagtgtcagggagtgctgaatgccagctacgctgcccagctggaaagcaaa
gggctctgggaatgggccatctttgtgctgttgcatacctccaatgcacacactcgtgaa
aaggcagtgcgtgagctcttaacccgccactgcgtgctgtccgagacatcagaatcctgg
acaaaagaagccttcctgatgcaaaagctctgtgttcccccagagtggattcacgaggca
aaggccattcgggcaagcatggagggagataagcataaagaggctctctacttattcaga
gctgggcactggaaccagtgccacaagctggtcatcaggcacttagcctcagatgccatt
atcaatgagaactacaagtacctgaaaggcttcctggaagatttgtcccccccagaacgc
agtacgcttatccaggactgggacacggcagggctggtttatttggactatatccgggtc
attgagatgctcgacaggattcagcagctggattgttccacatacgagttggagagatta
cataccaaagtgacgtcgctatgcaataggatagaacagatacagtgccacagcgccaag
gaccgattggctcagtcagacatggccaagcgcatcgctaacctgctgcgggtggtgctg
atcttgcagcactctccagagcctgcatccgactccacgcccgacttgcagcgagtcccc
ctccgcctgcttgcgccccacattggccggctccccatgccggaggactatgccctggag
gagctgcgcagcctcacgcagtcctacctacgggaactgaccgtggtgacgcagtga
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integrated database retrieval system
