Gavialis gangeticus (Gharial): 109302794 Help Entry 109302794         CDS       T07453                                  Symbol DCHS1 Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism ggn  Gavialis gangeticus (Gharial) Brite KEGG Orthology (KO) [BR:ggn00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:ggn04515]     109302794 (DCHS1) Cell adhesion molecules [BR:ggn04515]  Cadherins   Cadherin related    109302794 (DCHS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th RET_CLD1 PepSY CADH_Y-type_LIR Motif Other DBs NCBI-GeneID:  109302794 NCBI-ProteinID:  XP_019380181 LinkDB All DBs Position Unknown AA seq 3266 aa AA seqDB search MGRLEGTALLLLLLLLLLLGSPRAGQASTVLGTLDLQIDEEQPAGTIIGDISAGLPPGTT AYMYFISAQEGSGVATDLEIDENTGIIKTARVLDRETRDRYSFIAVTPEGVTVEVGIQVN DINDHAPAFPRRRGALQIPEHTPAGSRFPLDPAFDADSGQLNTQGYAIKGGNVGQAFRLE TRRGPNGVLQPELVVSGVLDRENRSSYALVLEAYDGGSPPRSTQMTLQVSVQDVNDNAPA FNQSRYHTLISENLKPGSSILQVFASDADEGDNGAVVYEINRRQSDPDQYFTIDARTGVI RLNKGLDYELRKVHELVVQARDRAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPR ISEGAQPGQYVARISVSDPDYGEYANVNVSLEGGDGKFALTTKDNIIYLICVDQLLDREE RDSYDLRVTATDSGTPPLRAESAFVLQVTDVNDNPPLFDQQEYRQSIPEVVYPGSFVLQV TARDKDQGPNGEVRYSILQGPDTHASWFAIDPATGIITTAAPLDYEMDPQPQLTVLATDG GTPALSSTAVVFVVLQDVNDNEPVFKSNFYNVSLKENTPAGTCFLQVTATDADSGPFGSV SYSVGSGIGSVVPTQFSIDKHTGQLCTVQPLDRDEGADAYDFTVTAVDGGGLNSMVYVKV FLEDVNDNRPAFYPVEYAASISTQSMPGTAVLRVTAHDKDEGLHGKVTYHIVAGNSPPLF SLNKDTGVISLSWSLSGKANTLVQLAISARDGGGLVAQPNAHANISIVAGTVSPPVFEQA QYFFTVTEDTPQGTSIGAVRAQNPPGHSDDIFYSISSGDPHSYFSIDSGSGQLRISLPLD HEAQAVLVLDVQARSGSPPAYSNARVKIAVADVNDNVPAFPAPSDSILLPAATAPGTAVY TLQAEDRDSGANGQVHFELASGGDGVFSVERASGTVRLVGALPPEAGAPYGLVIVARDGG APQLSATFTLLVHVQAAHDHGPLFDTLIYRVEVREGTPVATRFLQVRALARDAGAAPLTY HLRADGDAASFGIVPESGWLYVKSALDRETRDLYVLTVLASAGAGSGTGGRTGTSTVRVS VTDENDNSPRLSEERYFFTVPENQPPGTGVGRVTASDRDAGPNSRLTYRLLQHDPSFLVH TQTGELSARRSLDREQQSSYQLLVVVQDGGTPPRSATGTVHVTVLDENDNAPAFLHVAAG QELPVQVLEEKPSGHLVASLQAKDPDEGENGTVTYSLTGAWAERFTLHVATGELRTATML RHADRAEYLFTVAASDQGAVPRRTSAVVRIQVLPSSRAVPRPDATVLTLQPMEGVKPGSV IGSVAPTDAPARGQVTYTLVGGSGDGTFVVDSSTGEIYAARELDYEARARHTLQVSAEDT QRGYPASRLVLVQILVQDRNDQAPTFPEDPVTIVVPENTPAGASVFTFQALDGDGAGPNS QVRYTLLRQEPSGASFQLDAHSGTLSLLRALDRETAASFLLVVEATDQARNASQRRSAAV TARVFVTDENDNAPTFLSPSAVRVVEDQPTGFVALHVVARDGDLGENGRVSYALRAGNAD GRFHLNPSTGALSIVRALDREEVAQHNLTVVATDHGFPRHSATQLLSVLVLDVNDEAPVF AQPDYEAGVRENLPAGTSVLQVQATDRDLGANGEVRYGGLSGGPFSIHPQTGLITTTRAL DREEQELHVLTVYARDSGLPPNVAKATVRVLVGDENDHAPRFESQSCSMEVPENESRVML HVLRATDPDTGENGRLEYYVEDGDPAQDFSLDPASGILSTARSLDREHTAAYVLTVVARD HGMPRRSATTTVHVRVLDLNDHAPRFAEATYAVEVPEDLPVGALVLQLAAQDPDEGTNGR VSYYLGNESLGTFQVDPESGRITSAQALDRERRPSYSFLATAVDSAPWEPKSAAVRVTVT VQDVNDHAPAFLQSPLTITLPHHTPPKQVVATLRAEDRDAGANASVLYRFAAPTPGFAIN SYTGAIQLLQPLSSLGPRQRTLFVLATDQGQPALSSTGVVVIRLQDEGDRGVRFPRSTSE VALPENAAAGTAVVTVQAMHAGGSSGRITYSIVSGNERGTFLIQPHSGTISVRDSRSLDF EASPRLRLVVQAETPSAFGFTAVNLNLQDVNDNLPRFQLQNYVAFIWEAQGYDSPVIQVL ADDLDQGANGQVTYAINQSLPMNGLYHIDAQTGAITTAAILDREIWSQTRLVLMAVDRGN PPLVGSATLTVVVMDVNDNSPTIPLPWEVRVPENTLLGTEITQVTGNDVDSGPALSYALV LDGDAAGTFGVLRYSGRIALTGPLDHEQRSRYALTVRASDSRHEAEANLTVIVEDVNDNA PVFSQGLYQVTLLEHTPAGSAILTVSATDRDSGSNGEFTFHLATPSAGVSIDPSNGTLFT TRQAAFDPSRPTLDLVVEARDRGSPGLSAWATVQIRVVDMNDHSPAFQQPHYNACVPEDL RPGTTVLMLEAGDADLSRENAGFDYTIVSGNGGNAFQVESRVSWVGGQLRTQGALVLVEP LDFEATPLYNLTVAASDRGLPQRSIAVPVLVTVLDVNDNPPVFARAEYRAAVSESAPPGT ELLRVVAQDADSGPHGRVRYSISSGDQRGLFQLHESTGALRLVQPLDCETQALHALVVQA SDGPGGHFALVPVAIEVKDVNDNRPYFPVETVSAGLRENLPPGTLVTTLRAVDADAGAFG ELHYTVLDQPVGAPGAAEAHDSFTINSSSGELRSRLTFDYERAKAFQLLVRAVDAGNASA TVTVRVLVTGEDEYDPVFQDPPFHFEVPEGARKGQSIGRVEATDEDEGADGVVLYALAKP SPYFGVNQTTGTVYLRVDSQPQPAGRAKREPREMSLEVQARSPLPGSRSASTQVTVDITH TTFGLAPELNLLLVVAVAASLGVVVVLATMAIVLALIRSRQRRGRKKPEPDAQLSRVQSG SLQKLGHEEPALPGGDHIYHQTLPGYGTEPAGPYTRGGSLDPSHSSGRGSAEAAEDDEIR MINEYPRVASITSSLQEHLAARGPDSGIQQDADQLSDISCEPGALEGAQWFKSKKGSGLL LPGQPPQLYREDGGGSAFLGVGCGLSVSGHPKDYAFPEDGKPSVEGSLTAIVASDEELRG SYNWDYLLNWCPQFQPLASVFTEIARLKDESSLRKPFPAKPKAEPKPRIDPPPLITAVAH PGAKSVPPKPAAGRTFPHLSSLRRSPISHEGSISSSAMSPSFSPSLSPLAARSPVVSPFG VSQGPSASVISAEHSLEPLDEAELRI NT seq 9801 nt NT seq  +upstreamnt  +downstreamnt atggggcggctggaggggacggccctgctgctgctgctgctgctgctgctgctgctgggg agcccgcgagcggggcaggcctccacggtgctgggcaccctggatctccaaatcgacgag gagcagccggcgggcactatcattggggacatcagcgccgggctgccccccggcaccact gcctacatgtacttcatctcggctcaggagggtagcggcgttgccaccgacctggagatc gacgagaacacgggcatcatcaagacagcccgcgtcttggaccgggagacccgggaccgc tacagcttcattgccgtcacccccgagggcgtcacggtggaggtgggcatccaggtgaac gacatcaacgaccacgcgcccgccttcccgcggcgccgcggcgccctccaaatccctgag cacacgcccgccggcagccgcttccccctggaccccgccttcgacgccgacagcgggcag ctgaacacccagggctacgccatcaaggggggcaacgtggggcaggcctttcggctggag acgcgtcgcggccccaacggggtcctgcagcccgagctcgtggtgagcggggtgctggac cgggagaaccgctcgtcctacgccctggtgctggaggcctacgacggtggctccccgccc cggagcacccagatgaccctgcaggtatcagtgcaggacgtcaacgacaacgcgcccgcc ttcaaccagagccgctaccacaccctcatctccgagaacctgaagcccggcagcagcatc ctgcaggtcttcgcctccgatgcagatgagggcgacaatggggctgtggtgtacgagatc aaccggcgccaaagcgaccccgaccagtacttcaccatcgatgcccgcaccggcgtcatc cggctcaacaaggggctggactacgagctgcgcaaggtgcacgagctggtggtgcaggct cgggaccgggcggtgcaccccgaggtcaccacagcctttgtcaccatccacgtgcgcgac tacaacgacaaccagcccaccatgaccatcatcttcctgagcgaggatggctcgccccgc atctccgagggggcgcagcctggccagtacgtggcgcgcatctccgtctcggaccccgac tacggcgagtatgccaacgtcaacgtctccctggagggcggcgacggcaagttcgcactc accaccaaggacaacatcatctacctgatctgcgtggaccagctgctggaccgggaggag cgggactcctacgacctgcgcgtgacggccaccgactcggggacgccaccgctgcgggca gagtctgccttcgtgctgcaggtgacggatgtcaacgacaacccgccgctcttcgaccag caggagtaccggcagagcatccccgaggtggtgtacccgggcagctttgtcctgcaggtg accgcccgggacaaggaccagggcccgaacggggaggtgcgctacagcatcctgcagggc cccgacacccacgccagctggttcgccattgaccccgccacgggcatcatcaccactgct gcccccctggattacgagatggacccccagccccagctgacagtgctggccacggacggt gggacgcccgcgctttcttccacggccgtggtgttcgtggtgttgcaggatgtcaacgac aacgagcccgtattcaagagcaacttttataatgtgtccctgaaggagaacacgcctgca gggacctgcttcctacaggtcacggccacggacgcggacagcggccctttcggctccgtc tcctactcggttggctccggcatcggcagcgtcgtgcccacgcagttcagcatcgacaaa cacacggggcagctgtgcaccgtgcagcctctggaccgggacgagggcgcggacgcctac gacttcaccgtcacggctgtcgatgggggcggcctgaactccatggtgtacgtgaaggtg ttcctggaggacgtgaacgacaaccggccggccttctacccggtggagtacgcggccagc atcagcacgcagagcatgccgggcacggccgtgctgcgtgtcaccgcgcacgacaaggac gaggggctccatgggaaagtgacctaccacatcgtggccgggaactcgcccccgctcttc tccctcaacaaggacacgggcgtcatctcgctctcgtggtccctgagcggcaaagccaac acgttggtgcagctggcgatctcggcgcgggacggcggagggctggttgcccagcccaac gcccacgcgaacatcagcatcgtggccggcaccgtctcgccccccgtcttcgagcaggcg cagtacttcttcacggtgaccgaggacacgccccaggggaccagcattggcgccgtgcgg gcccagaaccccccaggccactcggacgatatcttctactccatctcgtcgggggacccc cacagctacttctccattgactccggctcggggcagctgcgcatcagcctgcccctggac cacgaggcgcaggcggtgctggtgctggacgtgcaggcccgcagcggctcgccgcctgcc tacagcaacgcgcgcgtgaagatcgccgtggcggacgtcaatgacaacgtgcccgccttc cccgccccttccgactccatcttgctgcccgcggccaccgcccccggcacggctgtgtac acgctgcaggccgaggaccgcgacagcggggccaacgggcaggtgcacttcgagctggcg tcgggcggggatggggttttcagcgtggagcgcgcctccggcacggtgcggctggtgggc gcgctgccccccgaggccggcgccccgtatgggctggtgatcgtggcgcgggacgggggc gcgccccagctcagcgccaccttcaccctgctggtgcacgtgcaggcggcgcacgaccac gggccgctgttcgacacgctcatctaccgcgtggaggtgcgcgagggcacgcccgtcgcc acccgcttcctgcaggtgcgggcgctggcgcgggatgcgggcgctgcccccctcacctac cacctgcgggccgacggggacgccgccagcttcggcatcgtgcccgagagcggctggctc tacgtcaagagcgcgctggaccgggagacgcgggacctgtacgtgctgacggtgctggcc tcggcgggcgcgggcagcgggacgggcggcaggacgggcaccagcacggtgcgggtgagc gtcaccgacgagaacgacaacagcccacggctcagcgaggagcgctacttcttcaccgtg cccgagaaccagcctcccggcaccggcgtggggcgggtgaccgccagcgaccgggacgcg ggcccgaacagccggctcacctaccgcctcctgcagcacgaccccagcttcctcgtccac acgcagaccggggagctgagcgcccgacgcagcctggaccgagagcagcagtccagctac cagctgctggtggtcgtgcaggatggggggacgccaccgcgcagtgccacgggcaccgtc cacgtcaccgtgctggacgagaacgacaacgcgcccgccttcctgcacgtggctgctggg caggagctcccggtgcaggtgctggaggagaagccgtcggggcacctggtcgcctcgctg caggccaaggaccccgatgagggcgaaaacgggaccgtcacctactcgctgacaggggct tgggccgagcgcttcacgctgcacgtggccacgggggagctgcgcacggccacgatgcta cgccacgctgaccgggccgagtacctcttcaccgtggcagccagcgaccagggcgcggtg ccccgccgcacctcggccgtcgtccgcattcaggtgctgccgtcctcccgagcggtgcca cggccagacgccacggtgctgacgctgcagcccatggagggcgtgaagccgggatcagtg attgggtcggtggcaccgacggatgcccctgcacgagggcaggtgacctacacgctggtg gggggcagtggggacggcaccttcgtggtggacagctcgacgggcgagatctacgcagcc cgggagctggactacgaggcgcgggcacggcacacgctgcaggtgagcgcggaggacacg cagcgcggctaccccgccagccgcctggtgctggtgcagattctggtgcaggaccgcaac gaccaggcgcccaccttccccgaggaccccgtcaccatcgtggtgcccgagaacacgccg gccggcgcctccgtcttcaccttccaggcgctggacggggacggggccggccccaacagc caggtgcgctacaccctgctgcgccaggagccctccggtgcctccttccagctggacgca cactcgggcaccctgagcctgctgcgggcgctggaccgcgagaccgccgcgtccttcctg ctggtggtggaggccacggaccaggcgcgcaacgcgagccagcgccgctcagccgccgtc accgcccgcgtctttgtgacggacgagaacgacaacgcgcccacgttcctgtcgcccagc gccgtgcgcgtggtggaggaccagcccaccggcttcgtggccctgcacgtggtggcgcgg gacggcgacctgggcgagaacggccgcgtcagctacgcgctgcgggccggcaacgccgac ggccgcttccacctcaaccccagcaccggtgcgctgtccatcgtgcgggcgctggaccgc gaggaggtggcgcagcacaacctgacggtggtggccacggaccacggcttcccgcggcac tcagccacgcagctgctgtccgtgctggtgctggacgtcaacgacgaagcgcccgtcttc gcccagcctgactacgaggccggcgtgcgcgagaacctgccggccggcacctccgtgctg caggtccaggccaccgaccgcgacctgggtgccaatggggaggtgaggtacgggggcctc tccgggggacccttctccatccacccgcagactgggctcatcaccaccacgcgggccctg gaccgggaggagcaggagctgcacgtgctgacggtgtacgcccgggacagcggcctgccc cccaacgtggccaaagcaacggtgcgcgtcctggtgggggacgagaacgaccacgcgccc cgcttcgagagccagtcctgctccatggaggtgcccgagaacgagagccgtgtgatgctg cacgtcctgcgggcgacggaccccgacaccggcgagaacgggcgcctggagtactacgtg gaagacggggaccctgcccaggacttcagcctggacccagcctcgggcatcctgtccact gcgcgcagcctggaccgggagcacacagccgcctacgtcctgaccgtggtggcgcgtgac cacgggatgccgcggcgcagtgccaccaccacagtgcacgtgcgggtgctggacctcaat gaccacgcaccacggttcgctgaggccacctacgccgtggaggtgcctgaggacctgccc gtgggcgcgctggtgctgcagctagcggcgcaggaccctgacgagggcaccaatgggcgc gtctcctactacttgggcaatgagtcgctgggcaccttccaggtagacccagagagcggg cgcatcaccagcgcccaggccctggaccgcgagcgccgccccagctacagcttcctggcc acggccgtggactcggcgccctgggagcccaagagtgcggccgtgcgtgtgacggtgacc gtacaggacgtgaacgaccacgcgcccgccttcctgcaaagccccctcaccatcactctg ccacaccacacgccgcccaagcaggtggtggccacgctgcgggctgaggaccgggatgcg ggcgccaacgcatctgtgctgtaccgcttcgccgcccccacccccggctttgccatcaac tcctacaccggcgccatccagctgctgcagcccctgagctcgctgggcccccgccagcgc accctctttgttctggccactgaccagggccagccagcattgtcctccaccggcgtggtg gtcatccgcctgcaggacgagggcgaccgcggcgtgcgcttcccccgcagcaccagcgag gtggccctgcccgagaatgcggccgctggcaccgcggtggtgaccgtccaagccatgcac gcgggcggctcctcagggcgcatcacctacagcatcgttagcggcaacgagaggggcacc ttcctcatccagccccactcagggaccatctccgtgcgggactcgagaagcctggacttt gaggccagcccgcggctgcgcctggtggtgcaggccgagacgccgtccgccttcggcttc accgccgtgaacctcaacctgcaggacgtgaacgacaacctgccgcgcttccagctgcag aactacgtggccttcatctgggaggcgcagggctacgactcgcccgtcatccaggtcctg gctgatgacctggaccagggggccaacgggcaggtgacctatgcgatcaaccagtcgctg cccatgaacgggctgtaccacatcgatgcccagaccggggccatcaccaccgctgccatc ctggaccgtgagatctggtcccagacacggctggtgttgatggcggtggaccgcgggaac ccgcccctcgtgggctcggccacgctgaccgtggtggtgatggatgtcaacgacaacagc cccaccatcccgctgccctgggaggtgcgggtgcccgaaaacacgctgctgggcaccgag atcacccaggtgacagggaacgacgtggactcgggtccagccctgtcctacgcactggtg ctggacggcgacgcggctggcacctttggggtcctgcgctacagcggccgcatcgccctg acggggcccctggaccacgagcagcgcagccgttacgccctgaccgtccgcgcctcggac tcccgccacgaagccgaggccaacctcaccgtcatcgtggaggacgtcaatgacaacgcc cctgtcttcagccagggcctctaccaggtgaccttgctggagcacacgcccgcgggcagc gccatcctcactgtcagcgccacggatcgtgactccggcagcaacggggagttcaccttc cacctggccacgccaagcgccggcgtctccatcgaccccagcaacgggacgctgttcacc acgcggcaggcggccttcgatccaagccggcccacgctggacctggtggtggaggcccgt gacaggggctcacccgggctctcggcttgggccacggtgcagatccgggtggtggacatg aacgaccacagcccggccttccagcagccgcattacaatgcctgcgtgcccgaggacctg cgccccggcaccaccgtcctgatgctggaggcgggcgacgccgacctgtcccgcgagaac gccggcttcgactacaccatcgtcagcggcaatggcggcaacgccttccaggtggagagc cgggtgagctgggtgggcggacaactgcgcacccagggcgccctggtgctggtggagccg ctggacttcgaggccacgccgctctacaacctgaccgttgcggcctccgacaggggcctg ccgcagcgcagcattgccgtgcccgtgctcgtcaccgtgctggacgtcaacgacaaccct cccgtgttcgcccgcgctgagtaccgcgcggctgtgagcgagagtgccccccccggcacc gagctgctgcgggtcgtggcccaggacgccgactccggcccccacggccgcgtgcgctac agcatcagctccggcgaccagcgcggccttttccagctgcacgagagcacgggcgccctg cgcctggtgcagcccctggactgcgagacccaggccctgcatgccctggtggtgcaggcg tccgatggccccgggggccacttcgccctggtgcccgtcgccatcgaggtgaaggacgtc aacgacaacaggccctacttcccggtggagacggtgagtgccggcctgcgggagaacctt cctcccggcacgctggtcaccacgctgcgtgccgtggatgccgacgccggcgcctttggg gagctgcactacacggtgctggaccagcccgtgggggcaccgggcgcggccgaagcccac gactccttcaccatcaacagcagctccggggagctgcgttcacgcctcacctttgactac gagcgcgccaaggccttccagctgctggtgcgggctgtggacgccggcaacgcctcggcc accgtcaccgtgcgggtgctggtgacaggcgaggacgagtacgaccccgtcttccaggac ccgcccttccacttcgaggtgcccgagggtgcccgcaagggccagagcatcggccgggtg gaggccacggacgaggacgagggggcggacggagtggtgctctatgccctggccaagccc tcgccctacttcggcgtcaaccagaccacgggcaccgtgtacctgcgggtggacagccaa ccgcagccggccggccgagccaagcgggagccccgggagatgagcctggaggtgcaggcc cgcagcccgctgcccggctcccgctcggcctccacccaggtcaccgtggacatcacgcac accaccttcggcctggcccccgagctcaacctgctgctggtggtggccgtggcggcctcg ctgggcgtggtggtggtgctggccaccatggccatcgtcctggcgctgatccgctcccgg cagcgccgcggccgcaagaagccggagccggacgcgcagctgagccgcgtgcagagcggc tccctgcagaagctgggccacgaggagccggcactgcccggtggggaccacatctaccac cagaccctgccgggctacgggaccgagccggccgggccctacacgcggggcggctccctg gacccctcgcactccagcggccgtggctcggccgaagcagccgaggacgacgagatccgc atgatcaacgagtacccacgcgtggccagcatcacctcctccctgcaggagcacctggcc gcccgcggccccgactccggcatccagcaggatgccgaccagctctccgacatctcctgc gagcccggcgccctggagggcgcccagtggttcaagagcaagaagggctccggcttgctg ctgcccgggcagcccccgcagctgtaccgcgaggacgggggcggcagtgccttcctgggc gtgggctgcggcctcagcgtctccggccaccccaaggactacgccttccccgaggacggc aagccctccgtggagggctcgctcaccgccatcgtggccagcgacgaggagctccgcggc agctacaactgggattacctgctcaactggtgcccccagttccagccgctggccagcgtc ttcaccgagatcgcccggctcaaggacgagagctcgctgcgcaagcccttcccggccaag cccaaggcggagccgaagccccgcatcgaccccccgcccctcatcaccgccgtggcccac ccgggcgccaagtcggtgccgcccaagccggccgcgggcaggaccttcccgcacctgtcg tccctgcgccgctcgcccattagtcacgagggctccatctcctcctccgccatgtcgccc agcttctcgccctccctgtccccgctggccgcccgctcccccgtcgtgtcccccttcggc gtctcccaggggccctctgcctccgtcatcagcgccgagcactcgctggagcccctggat gaggccgagctcaggatctag

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