Gavialis gangeticus (Gharial): 109303088
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Entry
109303088 CDS
T07453
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109303088 (ZC3H12C)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
109303088 (ZC3H12C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
109303088
NCBI-ProteinID:
XP_019380696
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MSVCFPVNEYGTLYIQKYRKNSKVESSTCSSFMGLKDHLGHDLGHLYVGNTDTQINAIVP
WSMVEKPTMDKVNSRKEDADKEASEETGSSSCDSEESTNSDNESERLNNTASESRLLPKT
HRQLCRSPCLKPHILKRNEILQDFKLEEAHIVSKEVKKPPDAMKEYQTKLEFALKLGYSE
EQVQLVLSKLGTDALINDILGELVKLGNKTETDQTVSNVNTSVMREASSIESQRSESPLQ
EDVTEDGDNLRPIVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLERGHKDVTVFVPAWRKE
QSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSNDN
YRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQP
CPYGKKCTYGHKCKYYHPERGNQPQRSVADELRAMSRSTAAKTASEGGLVKSNSVPCSTK
NDGTSDLKRTAPKRQSDPSIRTQVYQDLEEKLPTKNKLETRSVPSLVSIPNSSAAKPQNT
APLSNGLSSGVHFPSQDQRPQGQYAPMMMATKNHGTPMPYDQYPKCESPVDVGYYSMLNA
YSNLSISGPRSPERRFSLDTDYRISSVASDCSSEGSMSCGSSDSYVGYNDRSYVSSPDPQ
LEENLKCQHMHPHGRLNSQPFLQSYHDPLTRVQSYSHEEPKHHQKPPIPYMAVHLQHPAV
GARSSCPNDYSAPQSSPHSKTMHLGRALVSTRIESISDSRLYDNSPLRHRKPYSGQDGLG
SWDRQSYGIDAYGYRQTYSLPSNPTQPCYEQFAFQSLPEQQDQTWRIPYCGIPQDPPRHQ
DTREKVYINLCNIFPSDLVRIVMKRNPHMTDAQQLAAAILVEKSQLGY
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtgttttccagttaatgaatacggaacactttatattcagaagtacaggaaa
aacagcaaagtggagtcaagtacatgcagcagcttcatgggcttgaaggatcacctaggg
catgacctaggccatctctatgtggggaacactgacacacaaataaatgcaattgtacct
tggtcaatggtggagaaaccaacaatggataaagtaaactccaggaaggaagatgcagac
aaggaggcatcggaagagactggaagttccagctgtgattcagaagagagcacaaattct
gataatgaatcagaaagactgaataacactgcatcagaatcacgcttgttgcctaagact
caccgacagctgtgcagatctccctgcttaaagcctcatatattaaagcgtaatgaaatc
ctgcaagactttaagcttgaggaggctcatatagtatctaaggaagtaaagaagccccct
gatgcgatgaaagaatatcaaaccaaactggagtttgcacttaaattaggttactctgaa
gaacaggttcaacttgttctaagtaaacttggtactgatgctttaatcaatgatattttg
ggagaacttgtcaaacttggaaataaaactgaaactgatcagactgtaagtaatgttaac
actagtgtaatgcgtgaagcatcttccatagagtctcagaggtctgagtccccacttcag
gaggatgtgacagaggatggtgacaacctgaggccaatagtaattgatggcagcaatgtg
gcaatgagccatggcaacaaggaagtattttcttgtcgaggaataaaattagctgtagac
tggtttttggaaagaggtcacaaagatgttacagtgtttgtaccagcctggaggaaagaa
cagtcaagaccggatgctcttatcacagatcaggaaatcttgcgtaagttagaaaaggag
aaaatcttggtgttcacaccgtcccgtcgtgtgcaggggagaagggtggtatgctatgac
gaccggttcatagtgaagctggcttttgagtcagatggtatcattgtttctaatgataac
tacagggacctagctaatgaaaaaccagaatggaagaagttcatagatgaacgtttgctg
atgtattcatttgtcaatgacaaattcatgcctcctgatgatccccttggccgtcatggc
ccaagtttggacaattttcttaggaagaaaccaattgttccagaacacaagaagcaacca
tgtccatatggaaagaaatgtacctatgggcataaatgcaaatactatcatccagaaaga
ggaaatcagcctcaacggtctgtagctgatgaacttcgtgccatgtccagaagcacagct
gctaaaactgcaagtgaaggaggattggtgaaaagcaacagtgttccatgtagcactaag
aatgatggcacttctgatctcaaacgtactgctccaaagaggcaatcggatcctagtata
aggactcaagtctatcaagacttggaggaaaagcttcccaccaaaaacaaattggaaacc
aggtctgtaccttcattagttagtataccgaattcttctgctgcaaaaccccaaaatacc
gcacctttaagcaatggcctttcatccggagttcatttcccatctcaggatcaaagaccg
cagggacagtacgctccaatgatgatggcaaccaaaaatcacggaacgcctatgccttat
gatcagtatccaaaatgtgagtctcctgtggatgtaggctattactctatgctgaatgca
tattcaaatttaagcatatctggtccacgaagtcctgaaaggcgtttctccttagataca
gattatagaattagctctgtagcctccgactgtagcagtgaaggtagtatgagctgtggt
agtagtgattcctacgtgggttacaatgatcggtcttatgtaagttcacctgacccacaa
ctggaagaaaacttaaagtgccaacatatgcacccacatggccgccttaactcacagccc
tttctacagagctaccacgatcctttaacacgagtgcagagttacagtcatgaagaacca
aagcatcaccaaaagcctccaattccatacatggctgtacatctgcagcaccctgcagtg
ggtgctcgttctagttgtcctaatgactattctgctcctcagagttcaccacattcaaag
accatgcatctggggagagcccttgtgtccacaagaatagaaagcatctcggactcacgc
ttatatgataactctccactaagacataggaaaccttattctggccaagatgggcttgga
agttgggataggcagagttatgggattgatgcatatggctatcgccagacttactccttg
cctagtaatcccacacagccatgttatgaacagtttgccttccaaagcttacctgagcag
caagaccagacttggcgcataccttactgtggaatccctcaagaccctccaaggcatcaa
gacacccgggagaaagtttatataaacctgtgcaacatcttcccctctgatcttgtgaga
attgttatgaaaaggaaccctcacatgacagatgctcagcaacttgctgcagccatttta
gtggaaaaatcccagctaggttattga
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