Gavialis gangeticus (Gharial): 109303247
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Entry
109303247 CDS
T07453
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03030
DNA replication
ggn03410
Base excision repair
ggn03420
Nucleotide excision repair
ggn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109303247 (RFC3)
03410 Base excision repair
109303247 (RFC3)
03420 Nucleotide excision repair
109303247 (RFC3)
03430 Mismatch repair
109303247 (RFC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ggn03032
]
109303247 (RFC3)
03036 Chromosome and associated proteins [BR:
ggn03036
]
109303247 (RFC3)
03400 DNA repair and recombination proteins [BR:
ggn03400
]
109303247 (RFC3)
DNA replication proteins [BR:
ggn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109303247 (RFC3)
DNA Replication Termination Factors
ELG1-RFC complex
109303247 (RFC3)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109303247 (RFC3)
DNA repair and recombination proteins [BR:
ggn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109303247 (RFC3)
Check point factors
HRAD17(Rad24)-RFC complex
109303247 (RFC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA
AAA_22
AAA_16
nSTAND6
AAA_2
Sigma54_activ_2
ABC_tran
AAA_11
Motif
Other DBs
NCBI-GeneID:
109303247
NCBI-ProteinID:
XP_019380965
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MSLWADKYRPTALARLDFHRDQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTITAPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQELLKTVAQSQQ
LETSTQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSMSKIIAPIQSRCL
AVRVPAPSIEDICHVLSSVCKKEGLTLPQDLARQLAEKSGRNLRKALLMCEACRVQQYPF
TSDQDIPETDWEVYLRETANAVVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLTELL
NNCDGQLKGEVAQMAAFYEHRLQLGSKAIYHLEAFVAKFMALYKKFMEDGLEDMIF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctgggcggacaagtaccggcccacggcgctcgcgcgcctcgatttccaccgc
gaccaggcggcgcagctccgcaatctggttcagtgtggtgacttccctcatctgttggtg
tatggaccgtctggagctgggaaaaaaactaggataatgtgtctcttaagagaactgtat
ggtgcaggagtggaaaagctaaggattgaacatcagactataacggcaccctctaaaaag
aaaattgaaattagcaccattgcaagtaattatcatctcgaagttaatccaagtgatgca
ggaaatagtgaccgtgtggtaattcaagaactgttgaagacagtagcgcaatcccaacaa
cttgagacaagtactcaaagagattttaaagtggtactgttgacagaagttgacaaactt
actaaagatgctcagcatgcactgcgaagaaccatggagaagtatatggccacctgcaga
ctgatcctgtgttgcaattccatgtcaaaaattattgcacctatacaaagtagatgtcta
gcagtacgagttcctgctcctagcattgaagatatttgtcatgtgttatccagcgtgtgt
aaaaaagaaggtctgactcttcctcaggatctagctcgtcagcttgctgagaaatctgga
aggaatcttcgaaaggcgctgcttatgtgtgaggcctgcagagtgcaacagtatcctttc
acatctgatcaagacatccctgagacagactgggaagtatatctgagggagactgcaaat
gctgttgtcagtcagcagactccccagaggctacttgaagttcgtggacggctttatgag
ctcttaacccactgcattcctcctgagattataatgaagggccttttgacagaacttcta
aataactgtgatggacaactaaaaggagaggttgcacaaatggctgctttctatgagcat
cgactacaattgggcagcaaagctatttaccatctggaagcatttgtggcaaaatttatg
gcactttataagaagtttatggaggatggactagaagacatgattttttaa
DBGET
integrated database retrieval system
