Gavialis gangeticus (Gharial): 109303414
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Entry
109303414 CDS
T07453
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha-1 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04510
Focal adhesion
ggn04512
ECM-receptor interaction
ggn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109303414 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109303414 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109303414 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
DUF713
DUF948
GP41
Motif
Other DBs
NCBI-GeneID:
109303414
NCBI-ProteinID:
XP_019381169
LinkDB
All DBs
Position
Unknown
AA seq
3096 aa
AA seq
DB search
MGLSCRAHCGLLLAAAIWALGRCQLRGLFPAILNLASNAHITTNATCGEKGPEMFCKLVE
HVPGRPLRNAQCRVCDNNSPNPKEQHPISNAIDGTNNWWQSPSIQNGREYHWVTITLDLR
QVFQVAYVIIKSANAPRPGNWILERSVDGTKFTPWQYYAISDTECLTRYNITPRLGPPTY
KRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSPKLLEFTSARYIRLRLQRIRTL
NADLMTLSHHDPKDVDPIVTRRYYYSIKDVSIGGMCICYGHARSCPLDETAKKLQCQCEH
NTCGESCNECCPGYHQKPWRPGTISAGNTCEKCNCHNKAQDCYYSQSVADQNRSINIHGQ
YIGGGVCINCTQHTTGINCEICADGYYRPHKVSPYEDNPCHPCDCDVFGSLSSSCTKDDD
HSDLHQGTRPGQCECKEGYSGEKCDRCAFGYRGYPKCVHCNCSMVGSINDDPCTEPCLCK
ENVEGENCDHCKAGFYNLQERNPQGCTECFCFGVSDVCDSLAWPISQVLDMDRWLVTDLY
NPNTVQPQQGQLDRSHQISINNTVAMKILKPAYYWSAPEPYLGNKLTAFGGYLKYTVSYD
IPMESVDSDIVSSVDIIIQGNGQFLSTRAEGLSLQPYEEYSNAVRLVPDNFIDFNTKRAI
DRDRLMSVLVNVTHLLIRASYNIATRAIYRLDSVTLDSASANVIDLSSAADVEHCECPQG
YTGISCESCLPGYYRVDGILFGGICQPCECNGHANECDIYGVCFACQHNTTGPFCDQCLP
GFYGTPSRGTPGDCQPCACPLRTNKNNFSSTCHLGKGGDVICDKCWPGYAGSQCERCANG
YYGNPLVPGQTCVPCDCNGNVDPLEDGHCDAVTGECLKCVGNTMGHHCEKCADGYYGDAV
ITKRCRVCECHLNGSLSSICQHETGFCYCKPNVTGQRCDKCLNGFYGFNTGLGCLPCSCS
PSGSVSEDCNDEGQCHCVLGVAGEKCDRCAQGFHTFQDGGCTPCNCPHTQNNCDADSGQC
ICPPHTEGSKCELCKENYWGHDSELGCKACNCSAVGSASLQCDLLTGQCQCKSEFGGKDC
SRCALGYRDYPDCVSCDCELSGTKADQCEEGQGICSCEEETGICACKENVFGLHCSECKT
GTFALQASNPVGCTPCFCFGMSEFCSELENHARIPVTLTPDQSILHVVSQSNLTGTKEGV
FSQFHDVLLDAATVRQHLNTEPFYWRLPDQFQGDQLMAYGGKLKYTVTFYALDGFGTSNF
EPQILIKGGHTSKLVIYVDISAPENGVRRHQEVEIKEHFWKYFNSVSDQPVSHSDFMSVL
SNVEYVLIKASYGQGLQQSRIANISMEIGMKVEDMHLGRERAHLIEQCECPPGYAGFSCQ
SCAPGYYRKKHADLNVKEPRPLIMPCVPCQCNNHSEICDLETGKCLNCRDNTTGDHCGAC
APGYYGKVLGSVRDCSLCACPRANIIGFSPTCVLKDVDDYHCNACLTGYEGQYCERCSLG
YYGDPEAPGGSCQQCQCNPDGSVHNNCDRITGKCICKQGVAGQLCDECEPRHILVENECL
SCDDDCTGVLLDDLVNFDKAIFSVNLTDVVLAPYGKLSELENTTKQLKGVLLPREDPLHS
LQTAKEHLMSISGRTDQLQKELTRMLERARQLNRGTQRNMNRSQELTASIDTVHTTIKVL
AEVAASLNETLGLDFQLSNSTTQSLLENISTLLETMHKRHFREQHQNANAVLKGAERLLL
RVQKEYHRPQQEFAELKKDASDLLSNHMSRLQEAQDLVNEAHANTNETNRLLPLIFSNLA
ELNNKKLSINVENDLSIMLVKEGKALVDVAARLATDVKNSTSNLELQRDGLVLWNAKLRH
HVDDLVMQMSMRRMLDLVYRAEDHAAELQRLADVLESGLSNVRNVSLNATSTVYVHPNIK
SLIESTESLADDASRIIIDPLDLPEESFDFLGKDTLLLSSKFLNEAKNLKRKNDGLVSGL
NGLRKKVQKVRESSHKIAKQLKVSVTALRALPNDTSEKIVEAKEMAMAVNKSDVTGVSHI
VDFTQKLINTSSALSRVNDTLRKTSELIMDSSKAATSAEQQVKEVEAQANLLFDRLKPLK
RLEENLSRNLSEIKELISQARKQAASIKVAVSADRDCIRAYQPQISSSNYNTLTLNVKTT
EPDNLLFYMGSNGNNDFIAVEMRRGRVAFLWDMGSGSTRVEYPDFQIDNNKWHRIYATRF
GKTGTLSVEEVSSTQKPLTKTAASPGTATVLDVNKSTLMFVGGLGGQIKKSPAVKVTHFK
GCMGEASLNGKSIGLWNYIEREGKCNGCFGSPQDEDTSFHFDGSGYSVVEKALRSTVTQI
IMFFSTFSPNGLLLYLASNGTRDFMSLELVDGKVRLTVDLGSGPLTLSTENRYNNGTWYK
ISFSRNKKQGVLAVMDAYNLNYKETKQGESPGVASDLNRSDKDPIYIGGLPRTRAVRKGL
SSRTYVGCIKNLEISRSTFDLIRNSYGVRKGCILEPIRSVSILNDGYIELEPKPLSPETE
LMATFATKNSSGIILAGLNKGAEKRLRRQAHLPFFSIMLIDGHLTVHVNAGDRASTRKVI
LQSANGTYSDGQEHSVILIRNKRMITVQVDESNPAEMRLSSSAEISPMNISNFYAGGVPA
GEGILGLKMTGSFYGCISNLIFNKELLDFTTAVRYQHVDMGNCLLSEKPKPAIHPEDIEV
QPDLQALPVPPRPLPDNKKVQCAQDEMPDHVPGARQFGLARGSHLVLIFNPSTVRRKLSV
QLNLRTYASSGLIYYMAHQNQVDYASLQLLGGQLYFSFDLGKGKAVTFHPAIISDGKWHT
IKAEYVKRKGIIIVDGQESAAVTALGDGSTLDVEGKLYLGGLPLDYTAKNIGNVTSSIPA
CIGSVMVNNKPLDKESPVSIFAVNKCYATAQEGTYFDGSGFAALVREGYKVRSDVNVTFE
FRTTAANGVLLGISSAKVDAIGLEIVNGKVLFHVNNGAGRITATYETRDANSLCDGKWHK
LQANKSKHRIALIIDGNVVQADNPHIQSTSADTNNPIYVGGYPTDVKQNCLTSKSLFHGC
LRNLMLIKGQQVESFDFSKAFDLRGVFPHSCPGPER
NT seq
9291 nt
NT seq
+upstream
nt +downstream
nt
atggggctgagctgccgcgcgcactgcgggctgctgctggccgccgccatctgggcgctg
gggcgctgccagctccgaggtttgtttccggctattttaaatctggctagcaatgctcat
atcaccaccaatgctacctgtggcgagaagggacctgagatgttctgtaaactggtggaa
catgttcctggtcgacctctacgcaatgcacagtgccgtgtctgtgacaacaacagtcct
aatcccaaagaacagcaccctatctccaatgctatagatggtacgaataattggtggcaa
agtcccagcattcagaatgggagggaatatcactgggtcaccatcaccctggatctaaga
caggtcttccaagttgcatatgtcatcatcaaatctgctaatgctccccgacctggaaac
tggattttggaacgttctgtagatggcacaaagttcacaccatggcaatactatgcaatt
agtgacacagaatgcttaactcgttataatattacaccaagacttggacctcctacttac
aaaagagatgatgaagtgatttgcacctcttattattccagactagttccactggaacat
ggtgagatccacacatcacttatcaatggtagacctagcgctgatgacccttcaccaaag
ctattggagtttacttctgcacgatacatccgtcttcgcctgcagcgtattagaaccctt
aatgctgatcttatgactcttagccaccatgatcctaaagatgttgatcccattgttacc
agaaggtattactattcaataaaagatgtctccattggtggcatgtgtatttgctatggc
catgctcgaagttgcccactggatgaaactgcaaagaaactgcaatgccagtgtgaacac
aatacatgtggagagagctgtaatgagtgttgccctggctaccaccagaaaccatggaga
ccaggaaccatttctgctgggaacacatgtgagaagtgcaactgtcataacaaagcacag
gattgttattatagccagagtgttgcggaccagaacagaagtataaatattcatggccag
tacatcggagggggagtctgcataaattgtactcaacacactacaggaatcaactgtgaa
atctgtgctgatggatactatagaccacataaagtttctccctatgaggataacccttgc
catccttgtgactgtgatgtgtttgggtctctgagttccagctgcactaaagatgatgat
cattctgaccttcatcaggggactcggccaggtcaatgtgagtgcaaagaaggttactca
ggtgaaaaatgtgatcgttgtgcatttggctacaggggctacccaaaatgtgtgcactgt
aactgcagcatggttggcagtatcaacgatgacccatgcacagagccttgtctttgcaaa
gagaatgtagaaggtgaaaactgtgaccattgcaaagcaggattctacaatttgcaagaa
agaaatcctcagggctgcacagagtgtttttgctttggggtttctgatgtctgtgacagc
cttgcatggcccatcagtcaggtgttagatatggataggtggttggtgactgatctgtat
aatccaaacactgtacagcctcagcaaggccagcttgatagatcacatcaaataagtatc
aacaatacggtggctatgaaaatactgaagcctgcttactactggtcagcacctgagcca
tatctaggaaataaactaactgcatttggtggatacttgaaatacactgtgtcttatgac
attccaatggagagtgtggatagtgatatagtgtctagtgtggatataatcattcagggc
aatgggcaatttctgagtaccagagcagagggcctgtcattacagccatatgaggagtac
tctaatgcagtgcgtcttgtacctgataacttcatagattttaatacaaaaagggctata
gatcgggacaggctgatgtctgttttagtaaatgtaactcatcttctgattagggctagc
tacaacattgcaacaagagccatatacaggctcgactctgtcaccttggattcagcaagt
gctaatgttatagatctttcttcagcagcagatgtggaacactgcgaatgtcctcagggt
tacacagggatttcctgtgagtcctgtcttcctgggtactaccgcgtagatggaattctc
tttggagggatttgccaaccttgtgaatgcaatggccatgcaaatgaatgtgatatctat
ggggtttgctttgcctgtcaacacaacactacaggacctttttgtgatcagtgcttgcct
gggttctatggcactccatcccgaggaactcctggagactgtcagccctgtgcctgtcct
ctgagaacgaataaaaacaatttcagttccacctgccacttaggaaaaggaggcgatgtt
atctgtgacaagtgttggccagggtatgcaggatcacagtgtgaaaggtgtgctaatggt
tattatggaaatccgctggtacctggccagacatgtgttccttgtgactgcaatgggaat
gtagatcctctagaagatggccattgtgatgcagtcacaggagaatgtttgaagtgtgtg
gggaacaccatgggccatcactgtgagaagtgtgctgatgggtactatggggatgcagtg
atcactaaaagatgtcgtgtctgtgaatgccatctgaacggttcactttccagcatttgc
caacatgaaactggcttctgttactgcaaaccaaatgtaactggacaaagatgtgataaa
tgcttgaatggtttttatggctttaatactggccttggctgtcttccttgcagttgtagt
ccatctggatcagtctctgaggattgtaatgatgagggccagtgtcactgtgtactagga
gtggctggggaaaagtgtgatcgctgtgctcagggctttcatacattccaggatggtggc
tgtacaccttgcaattgccctcatactcagaacaactgtgatgcagattctggccaatgt
atctgcccccctcacacagaaggatcaaaatgtgaactctgtaaggaaaactactgggga
catgattctgagcttggctgcaaggcctgcaattgcagtgcggttggttcagccagtctc
cagtgtgatttattgactggtcaatgccaatgtaaaagtgaattcggaggaaaagactgc
tccaggtgtgctttaggctatagggattacccagattgtgtttcttgtgactgtgaattg
agtgggaccaaagcagaccagtgtgaagagggtcaaggaatctgcagttgtgaagaagag
actggcatttgtgcctgcaaggaaaatgtctttggattgcactgtagtgaatgcaagact
ggaacctttgctctccaagctagtaaccctgtaggatgcactccttgcttctgttttggg
atgtcagaattctgttcagaattagaaaaccatgccagaattccagtaaccctgactcca
gatcagtccattcttcatgtggtttctcaaagtaatctcacaggaacaaaagaaggtgta
ttttctcagtttcatgatgttttattggatgctgcaacagtcagacagcacttgaataca
gaaccgttttactggaggttgccagatcagttccagggagaccaactcatggcttatgga
ggaaaactgaagtacacagttactttttatgctttggatggctttggcacctcaaatttt
gaaccacagattctgataaagggaggtcacaccagtaaattagtcatctatgtggatatc
tctgctccagaaaacggagtgagacgtcaccaggaagtagaaataaaagagcatttctgg
aaatactttaattctgtgtctgaccaacctgtctcacactctgacttcatgtcagtgctt
agcaatgttgagtatgtcctcatcaaagcatcgtatggtcaaggattacagcaaagcaga
attgcaaatatctcaatggaaataggaatgaaggttgaggacatgcatttgggcagagag
agagcacacctcatagagcaatgtgaatgtccacctggctatgctggattctcatgtcag
agctgtgctcctggatactacaggaaaaaacatgcagacctgaatgtaaaagagccacgt
cctttgataatgccgtgtgtaccatgtcagtgcaacaaccatagtgagatctgtgacctg
gaaacaggaaaatgtctgaactgcagagataatacaactggtgatcactgtggtgcttgt
gccccaggctactatgggaaagtacttggatctgtccgtgactgctctctttgtgcctgc
cccagagccaacatcattggctttagtcccacttgtgttctgaaagatgttgatgattat
cattgcaatgcttgtctcactggatatgaagggcagtactgtgaaaggtgttctctaggt
tattatggagatcctgaagcacctggtggcagctgtcagcagtgtcagtgcaatccagat
ggttctgtccacaataattgtgatcgtataactggaaagtgcatctgcaagcagggtgtg
gcaggacaactctgtgatgaatgtgaaccaagacacatccttgtggaaaatgaatgtctt
tcatgcgatgatgactgtacaggtgtcttattagatgacctggttaactttgacaaagct
atattttccgtgaatcttactgatgttgtccttgccccatatgggaaattgtcagagttg
gagaatacaacaaaacaactgaagggggttttattacctagagaagatccacttcattca
ctacagacagcaaaagaacatctgatgagtatatcgggacgcactgatcaactgcaaaag
gagttgactagaatgttagagagggcccggcaactcaacaggggcactcaaagaaacatg
aacaggagtcaggaattgactgcatctattgacactgtgcatacaaccatcaaagtcctt
gctgaagtggctgcatcattaaatgagacattgggtctggatttccagctgtcaaacagc
acaactcagagtttgctggagaatatctctaccctgctggaaacaatgcataaaaggcat
ttcagggagcagcaccaaaatgccaatgctgtactgaaaggtgcagaaaggttgttgcta
cgggtgcagaaagagtatcacagaccccagcaagaatttgcagaactgaaaaaagatgca
agtgatctcttatcaaaccacatgagcagactacaggaagcccaggacttggtgaatgag
gctcatgctaacacgaatgagacgaaccggctgcttccccttatctttagtaacctggca
gaattaaataataaaaagctaagcataaatgtggaaaatgacctttccatcatgctagtt
aaggaagggaaggcattggtggatgttgctgcacgtcttgccacagatgtaaagaactct
acatcgaatctagaactccaacgagatgggctggttctctggaatgcaaaattgcggcat
catgtggatgacctggttatgcagatgtccatgagaagaatgcttgacttagtctacaga
gcagaggatcatgcagctgaacttcaaagacttgcagatgttttagagagtggcctttca
aatgtaagaaatgtatctttgaatgcaaccagtactgtctatgtccaccccaatattaaa
agtttgattgaaagtacagagagtctagcagatgatgcttctcgaattataattgacccc
ttggacttgccagaagaatcttttgattttcttgggaaagacaccttactgcttagttcg
aaatttctgaatgaagcaaaaaatctgaagaggaaaaatgatggccttgtgtctggattg
aatggattgaggaagaaggtacaaaaggttcgggagagttctcataagattgctaagcag
cttaaagtttcagtgacagcactgagagcactacctaatgataccagtgaaaaaattgtt
gaagcaaaagagatggctatggctgtgaacaaaagtgatgttactggtgtaagccatatt
gtggattttactcagaagctgataaacacttcatctgcattgtccagagttaatgacaca
ttgcggaaaacaagtgaacttataatggactcatcaaaagctgcaacctcagctgaacaa
caagttaaagaagtagaagcacaagccaatcttttatttgataggctgaaaccactgaaa
aggctagaagagaacctgagtagaaatctgtctgaaataaaagaacttatcagtcaggcc
cgcaagcaggcagcatctattaaagttgcagtatcagcagacagagattgtattcgtgcc
taccagcctcagatttcatcctctaactacaacaccttaacattaaatgttaaaacaaca
gaacccgacaaccttcttttctatatgggtagcaatggaaataatgacttcatagcagtg
gagatgcggcgtggtagagtagcctttctttgggatatgggctctggatcaacaagagtg
gagtatcctgattttcaaattgataacaacaagtggcacaggatatatgcaaccaggttt
ggaaaaactggtacactgagtgtagaggaagtgagctccactcagaagcccttaactaaa
actgcagcctctcctgggacagctactgtactggatgtaaacaaatcaacattgatgttt
gttggaggacttggaggacaaatcaagaaatcaccagcggttaaggtgactcatttcaaa
ggatgcatgggagaggcatccttgaatggcaaatctattggtctttggaattacattgaa
agggagggtaaatgcaatggatgctttggaagccctcaggatgaagacacttcattccat
tttgatggcagtggatattcagttgtggagaaggcgctccgctccaccgtgactcaaata
ataatgtttttcagcaccttctcccctaatgggctcctgctatatcttgcttctaatggc
actagagatttcatgtctctggaacttgttgatggcaaagtgagactgactgttgatctt
ggttcaggaccgcttactctttcaacagagaatcgttacaataatgggacatggtataaa
atttcattcagccgcaacaagaaacaaggagtattggcagtcatggatgcatataacctt
aattataaggaaaccaagcaaggagaatcccctggagtagcgtcggacctcaatcgttca
gataaggacccaatttacattggtggactaccaagaacaagggctgtgaggaaaggactt
agcagcagaacatatgtaggttgtattaagaacttggaaatatcccgctctacctttgat
ttgattagaaactcgtatggtgtgagaaaaggctgcatattggagcctatccgtagtgtc
agcatcttgaatgatggctacattgaattagaacctaagcccctatctcctgaaacagaa
ctgatggcaacttttgctactaagaacagtagcggaatcatccttgctggtctcaacaag
ggagcagagaagcgactacgcagacaagcacatttgcccttcttttcaataatgctgatt
gatggtcatctcactgtgcatgttaatgcaggggacagagcaagtaccagaaaagtcatt
ctccagtctgctaatgggacatacagtgatggacaagaacactctgtcatcctgatccgg
aataagaggatgataactgtacaagtggatgaaagtaaccctgcagaaatgagactcagc
tcatcagcagaaattagtcctatgaatatttccaacttctatgctggtggggtgccagca
ggcgagggcatcttagggttgaagatgactggatctttttacggatgtataagcaatctg
atttttaacaaggagcttttggatttcaccactgctgtgaggtatcaacatgtggacatg
ggtaactgcttgctttcagagaagcctaaaccagcaatacatccagaagatattgaggtt
caacctgaccttcaggctttgccagttcctccaaggcctcttccagataataagaaggta
cagtgtgcacaagatgaaatgccagatcatgttcctggtgcccgccagtttggacttgcc
agaggcagccatttagtactgatttttaatccgagtactgtcaggaggaaactctctgtt
cagctgaacctcagaacctatgcgtctagtggcctgatttactacatggctcatcagaat
caggttgattatgcatcccttcagcttctggggggacagctatatttctcatttgatctt
ggaaaaggaaaagcagtgacttttcaccctgctatcatcagtgatggaaaatggcatacg
ataaaggcagaatatgttaaaagaaaaggcataatcatcgttgatggtcaggagtcagca
gcagttactgctctgggagatggcagcacactggatgttgaagggaagctctatctggga
ggacttcccttagattatacagctaagaatattggaaatgtcaccagcagtatccctgca
tgcattggcagtgtgatggttaacaataagccactggacaaagaaagcccagtctccatc
tttgctgtgaataaatgctatgcaacagcgcaggaaggcacttactttgatggaagtggc
tttgctgctcttgttagagaaggttataaagtccgatctgatgtgaatgttacgtttgag
ttccgtaccactgccgcaaatggagttcttcttggaattagcagtgctaaagtagatgcc
attggattggagattgtaaatggcaaggttttgttccatgtcaacaatggagctggcaga
ataacagccacatatgaaacaagagatgcaaatagcttatgtgatgggaagtggcacaaa
cttcaagcaaacaaaagcaaacatcgaattgctctgataattgatgggaatgtggtccag
gctgataatcctcatatccagtcaacatctgcagatacaaacaatcctatttatgttgga
ggctatcccactgatgtgaagcaaaactgtctgactagcaaaagcttattccacgggtgt
ttgcgaaacctgatgttgatcaaaggccaacaggtagaatcctttgacttcagcaaagcc
tttgacctgcgtggagtctttcctcattcctgccctggacctgaacgttaa
DBGET
integrated database retrieval system
