Gavialis gangeticus (Gharial): 109303626
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Entry
109303626 CDS
T07453
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109303626 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ggn03041
]
109303626 (DHX15)
03009 Ribosome biogenesis [BR:
ggn03009
]
109303626 (DHX15)
Enzymes [BR:
ggn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109303626 (DHX15)
Spliceosome [BR:
ggn03041
]
Complex A
U2 snRNP components
U2 related factors
109303626 (DHX15)
Complex B
109303626 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
109303626 (DHX15)
Ribosome biogenesis [BR:
ggn03009
]
Eukaryotic type
90S particles
Helicases
109303626 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
DUF3915
AAA_29
AAA_25
DUF2967
Motif
Other DBs
NCBI-GeneID:
109303626
NCBI-ProteinID:
XP_019381370
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MCGCREARHGNSTASGSTGSEEAVAPRPDQGPSSEDREEWKECDTEGYYRGAGGSSSHQD
ARPVFILTFRIFAVFCKSFRKDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLRPSNAMVL
TASGMQPLKPAVLPQGINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRHQSFVL
VGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVG
YSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKE
VVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRT
VIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQ
RIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV
TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG
IDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIAS
CDYNCSNEILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNH
ESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYF
MQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWL
VKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatgccgcgaagcccgccacgggaatagcactgccagcggcagcacagggagc
gaggaagctgttgcccctcgcccagatcaaggacccagctctgaagaccgggaagagtgg
aaggagtgtgacactgagggctactaccgaggagctggagggagcagcagccaccaagat
gccagaccagtatttatactaacattccgtatttttgctgtgttctgcaaatcctttagg
aaagatcgggatcgggatgatcgttctaaagaccgtgacagggatcgtgacagagataga
gatcgtgacagagaaagagataaggaaaaagatctacgtccatctaatgctatggttctt
actgcatcggggatgcaacctttaaaaccagcggtacttccacagggtattaatccattc
acaaacctaccacatacgcctcgatactatgacatcctgaagaaacggcttcaactccct
gtctgggagtacaaggaaagattcacagatattctgattcgacaccagtcttttgtattg
gttggagagactgggtctggtaaaacaacacagatccctcaatggtgtgttgaatatatg
aggtcattacctggaccgaagagaggtgtcgcgtgtacccagcctaggagagtagctgca
atgagtgtggcgcaacgagttgctgatgaaatggatgttatgttgggccaggaggttggt
tactctattcgatttgaagactgcagtagtgcaaaaactattctgaagtatatgactgat
ggtatgttacttcgtgaagctatgaatgaccctttgctggagcgctatggtgttataata
cttgatgaggctcatgaaagaacactggctactgacattttgatgggagttctgaaagag
gttgtaaggcaaagatccgacttgaaggtcattgttatgagtgctactctagatgctggc
aagtttcaaatttattttgataattgtcctctcctaactatccctggtcgtacgcatcct
gtggagatcttttatactccagagccagagagggattacctggaggctgcaattcgaaca
gtgatccaaattcatatgtgtgaagaggaagaaggagatcttctactatttcttactgga
caagaggagattgatgaagcctgtaagagaataaagcgtgaaattgatgatttgggtccc
gaagttggtgatatcaaaatcattccattatattccactcttccaccacagcagcaacaa
aggatctttgagcctccccctccaaaaaaacaaaatggagcaataggaagaaaggttgtt
gtatccactaatattgctgagacatcattaacgatagatggtgttgtatttgtgattgat
cctgggtttgctaagcaaaaggtgtacaatccccgcattagagtggagtctcttttggtg
actgccatcagtaaagcatctgctcagcagagagctggccgtgctggtcgtactagacca
ggcaagtgttttcgactgtatacagagaaagcctacaaaactgaaatgcaggacaacact
taccctgaaattctgaggtccaacttgggatctgtggtgctgcagctgaagaaacttggt
atagatgatttggtacacttcgattttatggatcctccagctcctgaaactctgatgaga
gccttagagcttttgaattatctggctgctttaaatgatgacggagacctaacggaattg
ggatctatgatggcagaatttccactggatccacaactggctaaaatggttattgcaagt
tgtgactacaactgctctaatgagatcctatctattactgccatgttgtcagtcccacag
tgttttgttcgccccacggaagccaagaaagcagcagatgaagccaagatgaggtttgcc
cacatagatggagatcatttgacgttgctgaatgtctaccatgctttcaaacaaaatcat
gagtcggttcagtggtgttatgacaacttcattaactacaggtccctgatgtctgcagac
aatgtacgccaacagctgtcacgaatcatggatagatttaatttgcctcgtagaagcaca
gattttacaagcagagactattacatcaatataagaaaggctttggttactggttatttt
atgcaggtggcacatttggaacgaacagggcattacctaacagtgaaagacaaccaagtg
gtgcagttgcatccttccactgttcttgaccacaaacctgaatgggtgctttataatgaa
tttgtccttacgacaaagaactatatccggacatgtacagacatcaagccagaatggttg
gtgaaaattgcccctcaatattatgacatgagcaatttcccacagtgtgaagcaaagaga
cagttggaccgcatcattgccaaacttcagtccaaggaatactcgcagtactga
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