Gavialis gangeticus (Gharial): 109303858
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Entry
109303858 CDS
T07453
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109303858 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ggn04990
]
109303858 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
ggn04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
109303858 (PDLIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
PDZ_2
CCDC158
Motif
Other DBs
NCBI-GeneID:
109303858
NCBI-ProteinID:
XP_019381735
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISRLSDGGKAARANVGIGDVVLTIDGISADG
MTHLEAQNKIKACTGNLTMTLQRVASTTKPEPVTVQKGELKEVVKPVPIASAVAPKVTST
VNVAYNKAPRPFGAITSSKVTSIPSPLSAFTPAHVTVPSSHASPPPLATVTPPPFAASGL
HANAKSSTDQRSPALSAVKTAVNIPRQPTTYNTALNALSTGNVQDVTEGQRRGFKENQGD
SKQQNGKNPPKRPPRKHVVDTYTEFYHMPTHRDASKKRLIEDTEDWHPRTGTTQSRSFRI
LAQITGTDHMKEPETESTKKTNDSLEATQPVAYAASVKTMPMSPDSSDTKSSAANITSAT
AFKPTEPQSAVKHSGWQPSNKAAQGWTSNSIAPSGAAAASTKSLMQPQLTEQDTLIQRAE
HIPAGKRTPMCAQCDQVIRGPFLVALGKSWHPEEFNCAHCKTSMAYIGFVEEKGALYCEV
CYEKFFAPECSRCQRKILGEVINALKQTWHVSCFVCVACHNPIRNNVFHLEDGDPYCETD
YYSLFGTMCHGCEFPIEAGDKFLEALGHTWHDTCFVCSVCCDSLEGQTFFSKKDKPLCKK
HAHSVNF
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgagtaactacagcgtgtctttggttggcccagctccctggggtttcaggcttcaaggt
ggcaaagacttcaatatgcctctgactatctctaggttaagtgatggtggcaaggcagct
cgagcaaatgtgggaataggcgacgtggttctcaccattgatggcataagtgcagatggg
atgactcatctggaagcacaaaacaagattaaggcctgcacaggaaatttgactatgact
ctgcaaagagtggcttctacaacaaaacctgaacctgttactgtgcaaaagggagaactt
aaagaagtagtcaaacctgtgcccattgcatctgctgttgcacccaaagtaacttccaca
gtgaatgttgcctacaataaggcaccgaggccattcggagctatcacttcctcaaaagtc
acatccattccatcaccgttgtctgcctttaccccagcccatgtgactgttccatcatca
catgcttcccctcctccactggccactgtcacccctcccccatttgctgcatctggactg
catgctaatgcaaaatctagtactgatcagcgttcacctgcactgagcgctgttaaaact
gcagttaatatcccacggcagcccaccacatacaatacagccctgaatgcgctttccacc
gggaatgtccaggatgtgacagaagggcaaagaagaggattcaaagagaaccagggtgac
agtaaacagcaaaatgggaaaaacccacctaaacgtccaccaagaaaacacgttgtggat
acctacacggagttttatcacatgcccactcacagagatgccagcaagaaacgactgatt
gaagataccgaggactggcaccccaggacagggactactcaatctcgttcttttcgtatc
ctggctcaaatcaccggcactgatcatatgaaagaaccagaaactgagtctacaaagaag
acaaatgattccctggaggccacacagcctgttgcttatgctgcctcagtaaagaccatg
cccatgagtccagacagttctgacaccaaatcatctgcagccaacatcacatctgctaca
gcctttaaaccaaccgagcctcagagtgctgtcaaacactcaggctggcaaccttcaaac
aaagcagcacaaggatggacatcaaacagtattgcaccatctggagcagctgcagcaagt
actaagtctttaatgcaacctcagctaacagagcaggacactttaattcaaagagcggag
catattccagcaggaaagcgtaccccgatgtgtgcccagtgtgatcaggtcattagagga
ccttttttggtggctttgggaaaatcatggcatccagaggagtttaattgtgcccactgc
aaaacctccatggcttatattgggtttgtggaagagaaaggggccctctactgtgaggtc
tgttatgaaaagttctttgctcctgagtgttctcgatgccagaggaagatacttggagaa
gtcatcaatgctctgaaacaaacttggcatgtttcctgttttgtgtgtgtggcctgtcat
aatcccatccgcaataatgtctttcatttggaagatggggatccgtactgtgaaacagat
tactattccctctttggtaccatgtgccatggctgtgaatttcccattgaagctggtgac
aaatttcttgaagccctgggccatacctggcatgacacctgctttgtgtgctcggtgtgt
tgtgacagtctggagggtcagactttcttctccaagaaggataagccactatgcaagaaa
catgctcactctgtgaacttctga
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