Gavialis gangeticus (Gharial): 109303886
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Entry
109303886 CDS
T07453
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109303886 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109303886 (HERC3)
Enzymes [BR:
ggn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109303886 (HERC3)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
HECT type E3
109303886 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
109303886
NCBI-ProteinID:
XP_019381797
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MLCWGYWSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGM
NTKGQLGHEREGNKPEQIGALADQHIVRIACGESHSVALSEQGQLFAWGAGSDGQLGLTT
IEDSVAVPRLIKKLNQQTILQVSCGSWHCLALSADGQFFTWGQNNYGQLGLGKECPSQAT
PQRVKFLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDEQDRETPCHVKLLR
SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIA
CGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACK
YHIVKHIFSGGDQTFVLCSKYENSLPADDFRTINESHYTCLINDETIDVWRQNLLEKNSS
NSVNNVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSLLLD
QILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYITLTLPLAMAILRLDTNP
SKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIPVLFSSYITAALRLLEKLHKV
NQKVRHVEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKVRPSIMQDPVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYTESNLLWFSDK
CFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVTPCLEDLKELSPTEGRSLQQ
VLDYPGEDVEEMFCLNFTICRESYGVTEQKKLIPEGDKITVQRDNRQEFVDAYVNYIFNL
SVHEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGNSNYNWEELEESTIYKGDYSATHP
TVKMFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMSSLRMIIQSTSSGEQYLPVAHTCYN
LLDLPKYSSKEILSARLTKAIDHYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttatgctggggctactggtcttttggccagcctgggataggtagcaatctgcaagta
atcattccagagccccaggtatatggattcattcatgacagaaatgtcaaggaggtggct
tgtggaggaaaccattctgtcttcctactggaggatggggaagtctatacctgtgggatg
aataccaaaggacagctgggccatgaacgagaaggaaacaaaccagagcaaattggagca
ttggcagatcagcacatagtgcgcattgcctgcggagagtctcacagcgtggcactcagt
gagcagggccagctctttgcgtggggtgctgggagcgatggacagctggggcttactacc
attgaagattcagtggcagttccaaggttaataaagaaattgaaccagcagacgatactg
caggtctcctgtggcagttggcattgccttgctctctctgccgatggccagttcttcacc
tgggggcagaacaactatggccagctgggcctggggaaagaatgcccctcacaagccacg
ccacagcgtgtcaaatttcttgacgggattcctttggcacaggttgctgctggtggggct
cacagctttgccctgtctctctcaggagctgtgtttggttgggggaagaacagctcagga
cagctgggcttaagtgatgaacaagatcgagagaccccttgccatgtgaagctcttacgg
tctcaaaaggttgtctatatcagctgtggagaagaacatactgcagttctaacaaagagt
ggaggggtgttcacgttcggtgcaggttcctgtgggcagctcggccatgattccatgaat
gatgaggttaatccccgaagagtgctggaactgatgggcagtgaagtgtcccagattgct
tgtggcagacaccacactcttgcctttgtgccttcttctggaatgatctatgcattcggc
tgtggaacaagaggccagctgggaactggacacacttgcaatgttaaatgcccatctcca
gtcaaaggtcattgggcagctcacaatgggcagctctcagggaagcctgatgcctgtaaa
tatcatattgttaaacatatcttctctggaggagaccagacatttgtactttgctccaag
tatgagaattcgttgccagctgatgatttccggaccataaatgaaagccattatacctgt
ttaataaatgatgaaactatagatgtttggagacaaaaccttttagaaaaaaacagctct
aattctgtcaataatgttgtgcagatcctgtcctctgctgcgtgctggaatggaagcttc
ctggagaagaaaattgatgagcactttaagaccagtcctaaaatcccagggatagacctg
aattccacgcgagtgctgtttgagaagctaatgaactctcagcattctcttctactagac
cagatcttgaagagctttgaaagctttttgattcctcagctgtcaagctcaccaccagat
gttgaggcaatgagaatctatttgattctacctgaattcccgccatttcaagactcaaag
tattatataacattaacgcttcctctagcaatggccattctgcgtctggatacaaacccg
agcaaagttttagataattggtggtctcaggtgtgcccaagatatttcttgaggttagtg
gacctctataaaggtgcagtcgtttacctcctcagtggacgaaagacattactgatcccc
gtccttttcagtagctacattacagctgctctcagactgctggagaagctgcacaaggta
aatcagaaagtcagacatgtggaatatgacaagttttatatcccagagatttctagcttg
gtggacattcaggaagactatctcatgtggttcttgcatcaagcaggaatgaaagtaagg
ccatctatcatgcaggatcctgtgacactctgttcttaccctttcatctttgatgctcaa
gccaagaccaaaatgctacagacagatgcagaactacaaatgcaggtggcaatcaatggt
gcaaacttgcaaaatgtcttcatgcttctcactctggagcctctgctggccagaagccct
ttcctagttcttcatgtccgcaggagcaacttggttggcgatgctttgagggagctgagc
attcattcagatattgatttgaaaaagcctcttaaagtgatctttgatggcgaggaggct
gttgatgctggaggggttacaaaggaatttttccttttgttgttaaaagagctcctaaat
cccatctatgggatgttcacttactatacagaatccaacctgctctggttttcagataag
tgttttgtagaacacaattggtttcacctgattggcataatatgtggacttgccatatac
aacttcactgtggtcgacctccattttccgttggctctatacaagaagctgttgaacgtg
acaccttgcttagaagatttaaaagagttgtcccctacagaaggaaggagtcttcagcaa
gttttagattatcctggagaagatgtagaagaaatgttctgcttgaattttacaatttgc
agggaaagctacggcgtgacagagcagaagaaattaatacctgaaggagacaaaattaca
gtgcagagggacaatcggcaagaatttgttgatgcctatgtgaattatatcttcaatctc
tcagtccatgaatggtatacagccttctctactggctttctgaaagtgtgtggtgggaaa
gtgcttgaactctttcagcccacagagctgagggccatgatagttgggaacagcaattac
aactgggaggaactggaagagagcactatctacaaaggggattactctgctacacaccca
acagtgaagatgttctgggaaacctttcatgaatttcccttggaaaagaagaagaaattt
ctgttgttcctgaccggcagtgaccgcattcctatctatggcatgtcaagcttgcgcatg
atcatccagtccacgtcaagtggagagcagtacctgccggtggctcacacctgctataac
ctccttgatctacctaagtacagcagtaaggagatcctgagcgcacggctcacaaaagcc
attgatcactatgaggggtttagcttggcctga
DBGET
integrated database retrieval system
