Gavialis gangeticus (Gharial): 109303925
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Entry
109303925 CDS
T07453
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggn03036
]
109303925 (SMARCAD1)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109303925 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
CUE
HHH_3
Motif
Other DBs
NCBI-GeneID:
109303925
NCBI-ProteinID:
XP_019381860
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MSQFNLDRFRFEKRSQVGEQENLPSPLPAAQPPAAFDAAASNGGGGEEDNEVTDDSSRPD
TPASDETEKTEDSSVPETPEVEKTTKLSHFKNRRNLQYIDVSSDSEDQDSQNCCATKRDN
VLQRDVIVISEQSEDEQPQDEVPTLTYANGTDQSQNMEEEDIIDAKLQTLKELFPQRNDQ
ELLQLIKSTRTMDEAIAAALTHSDEAASRKRKLEQSPRENSDDDDDDDQIAKKQKADSQE
GSASQKEWEKQEILVKKLQNEFPGLDKKELRDVLQEHNWVFHEALEALKVFAEDQEDAQN
PSISEVSNWNEVSTNSKNDHNSAKVKMKRKSTKTQNGFRKKDKGKKGIWSTKREMEDSEY
ESASEGGSSLDEDYSSGDEVMEDGCTTKILNFLQDASLGELTWIPQCSQKKAQKIIELRP
FNSWEALVSKMSKTNGLSEDIIWNCKTLLRERDVVLKLMNKCEDISNKLTNQVTRITEDG
GGGWNIEQPSILNQSLELKPYQKIGLNWLALLHQHGLNGILADEMGLGKTIQAIAFLAYL
YQQGNKGPHLIVVPASTLDNWIREVNLWCPDLGVLFYYGSQEDRKHLRIDINNKAVDFNV
IVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSVRYQHLMTINAMNRLLLTGTP
VQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKTAEEQSIYEKERIAHAKQIIKPFI
LRRVKDEVLKQLPPKRDLIELCAMSEKQEQLYYDLLNKIKKSIDSEEKNSDTGNVMMQLR
KMANHPLLHRQYYTDDKLRIMSTLMLKEPTHCDANPDLIFEDMTVMTDFELHLLCKQYAN
VSDFKLEMDQILDSGKFRTLEHILSDLKEKGDRVVLFSQFTMMLDILEVLLKQQQHRYIR
LDGKTQISERIHLIDEFNTDMGIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQA
EDRCHRVGQTREVQVIKLISKGTIEESMLKISQQKLKLEQDMTAADLGEGNIPADIATLL
KASLGL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtttaatctggaccgctttcgctttgagaagaggagccaggtaggggagcag
gaaaacctgccctctcccctacccgcagctcagcccccagctgcttttgatgctgcagca
agtaacggtggcggtggggaggaggataacgaggtgacggatgacagcagcaggccggat
acaccagcctcggatgagacagagaaaactgaagattcgagtgtcccagaaaccccagaa
gtagaaaagacaacaaagctctcacatttcaaaaatcgcagaaatttacaatacattgac
gtatcctctgacagtgaagatcaggattcacaaaattgctgtgctacaaaacgtgataat
gttcttcagagggatgttattgtgatttctgaacagtctgaagatgagcagcctcaagat
gaagtccctactttgacatatgcaaatggtacggaccaatcgcaaaacatggaggaggaa
gacatcatagatgctaagctccaaacactgaaggaactctttccacaaagaaatgaccaa
gaattactacaattgataaaatcaacgcgcacaatggacgaagcaatagctgctgctttg
acgcacagtgatgaagctgcttcccgaaaaagaaaactagaacagtctcctagagaaaat
tcagatgatgatgacgatgatgaccaaattgcaaaaaagcaaaaagccgactctcaggaa
gggtcagcatctcaaaaagaatgggaaaaacaagaaattcttgtaaagaaactgcaaaat
gaattccctggtttggataaaaaggaactgagagatgtacttcaagaacataattgggta
tttcatgaagcactggaagccttaaaagtatttgcagaagaccaagaggatgcacaaaat
ccttccataagtgaagtttcaaattggaacgaagtctccacaaatagcaaaaatgatcat
aacagtgcaaaggtgaagatgaaacggaaatctacaaaaactcagaatggctttaggaaa
aaagataaaggcaaaaaaggcatttggagtactaaaagagaaatggaagattcagagtac
gagtcagcctcagaaggtggtagctcccttgatgaggactacagcagcggtgatgaagtg
atggaggatggctgtacaactaaaatacttaacttcctgcaagatgcttcactgggtgaa
ctcacctggatccctcagtgttctcagaaaaaggctcaaaagataatagagctccggccc
tttaatagctgggaagctctggtttcaaaaatgagcaagacaaatgggttgtcggaagat
ataatatggaattgcaaaacactgctcagagagagagatgtggttctaaaacttatgaac
aaatgtgaagatatttcaaataaattgacaaaccaagtgaccagaattactgaggatggt
ggaggtggatggaatatagaacaaccttctattctgaatcaaagtttggaactcaagcca
tatcagaagattggtttgaattggttagcactgctccaccaacatggattgaatggcatt
ctagctgatgaaatgggtttaggaaagacaattcaagctattgcattcctggcatatctc
taccaacagggtaataaaggtcctcatttgattgttgtgccagcttcaactttagataac
tggataagagaagttaatctgtggtgtccggatcttggtgtccttttttattatggatcc
caggaagatcggaaacatctcagaattgacattaataataaagctgtagactttaacgtg
attgtgaccacgtataattgcgcaattagcagttcagatgaccgaagtctatttcgtcgg
ttgaaacttaactatgcaatattcgatgaaggccacatgttaaagaacatgggttctgta
cgttaccagcaccttatgacaattaatgcaatgaatcgtctgctactaacaggaactcca
gttcaaaataatctactggaattaatgtctctcttgaattttgttatgccacatatgttc
agtagcagcacaagtgaaatccggaggatgttttcttcaaaaacaaaaactgcagaagaa
caaagtatatatgaaaaggagaggattgcacatgcaaagcagataataaaaccatttatc
ttaagaagagtaaaagatgaagttcttaaacagctgcctcccaaaagagatcttattgag
ttgtgtgcaatgtcagagaaacaagaacagctctactatgacctcttgaacaagataaag
aaatctattgacagcgaggagaagaactcggacacaggcaatgtcatgatgcaactaaga
aaaatggctaaccatcctctgttacaccgtcaatactacacggatgataaacttaggatt
atgtcaactcttatgctcaaggaacccacacattgtgatgctaatcctgacctcatcttt
gaagatatgacagtgatgacagattttgagcttcacttgctttgtaaacaatatgccaat
gtcagtgacttcaagctagagatggaccagattttggactctggaaaatttagaactcta
gaacatattctctctgatcttaaagaaaagggtgatagagttgttttgttcagccagttt
actatgatgctagacatcttagaagttcttctgaaacagcagcagcatagatatattagg
ctggatggaaaaacacagatttctgaaaggatacatctaatagatgagttcaatacggat
atgggtatatttgttttcctgctctcaaccaaagctggtggccttggaataaatttgacc
tcagcaaatgttgtcattcttcacgacattgactgcaacccttacaatgacaagcaagca
gaggatcgatgtcacagagtaggtcagaccagagaagtacaagtcataaagctaatcagt
aaagggactatagaggaatccatgctcaaaatcagtcagcagaaattgaagctagaacaa
gatatgacagcagcagatttgggagaagggaacattccagcagatatagccactttatta
aaagcttcactaggtctctaa
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