Gavialis gangeticus (Gharial): 109303963
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Entry
109303963 CDS
T07453
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109303963 (SH3TC1)
Membrane trafficking [BR:
ggn04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
109303963 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_10
TPR_2
TPR_19
TPR_1
SH3_1
ARM_TT21_C
ARM_TT21_4th
SH3_2
Csd3_N
ANAPC3
SH3BP5
Motif
Other DBs
NCBI-GeneID:
109303963
NCBI-ProteinID:
XP_019381922
LinkDB
All DBs
Position
Unknown
AA seq
1359 aa
AA seq
DB search
MELSALGVESSSSVPGLDSTSEEKGFPSTAPYLEQKQNSHGEGNKQLLERSTSDCASLVT
NGFMPTAVGTEKEVCLQGQNDFSKNDKHSNISSRIMSSPAESIPTDISLRLSMVRQKTGL
HDHQLQGELRGRLRLLENDSREVMAAFSELSARLLSIHSDQDRIVVTFKTFEEIWKFTTY
YTLGFVNHCMENLLLDQSFWLSSQEKNNGKQEEARIEVSINEESLHLMYRGLLMQEGTFF
VLCSDNLIKEVTAADTVAKVYQNEFVTEDTSGGSLSDDLTLDNKVTTEPLIPFHQWFLKV
CSDSIDFACKTNSQPSEQIATGSSLAVTSYESAAPEEISFQKGDKIEIIGYFIECMPWFI
GRHVFTGQIGFVKTTHVIPDTSRTDSQNLDFLEEEEKLFLAKEKNAVEEDVIRLVKQTLN
TEVFTVYRIDGLEQLEFQKPYEHDFSHHSSRPEFSRTKKVKEFLMKCKDSQLQLERTVSQ
EKDFYRSSNKETIPMSEEPRFSIHQDKDDLESEVLQSLLLFLNSQEYVRDFKNLYDFSFP
FLSTTFYGYSGEDELVDYFRLAREAAKKANMPWALMRLCFLLGRLSVRKLKFSQARVYFE
EAMGAMKGDFGDLYLVIALYTNLTAIYLKQKNKEKSARIFDKAASLLVGIPNCVCSTDME
SDILRNALKRTVVSRSKHAEARACFLLVKHYTKLKQYEEALPFLERLQLLNNELGLQNSS
LSVNCYFKLGEFYSQKYLPHIVLSCVRIASSQGSGTLISCLRSIDLVMKNAPKLYQLRKA
GQTLPSQIAPYLRHTLASVFTNEQQKLYSTICLGLAELYRHHRQYGKAIVCMEKVLDSNT
SPSAEETINHLVLLAWLYILHRQNADALVILNAIADSFCGSLQQLGVIYNMIGIALKRVE
NIKEAAENYYKALQISKETKMTHNQAVVLSNFGMLCLDSAATNLAERYFIKAMKLFSRLP
SMDCGRDFIQVLLQLGSYYVNGTYKEKGLFYYEWAFLVAMETNNLESQLQAIQLLCQFYS
RVAPDGAQCVIYNEYKLSLARKMSDKVLEGQILETISQLYLSLGTERAYRSALEYTKRSL
GIFIDLQKKEKEAYAWLQAGKIYYILRQNELVDLYIQVAQDAALYTGDPNLGMELFEAAG
DIFFNGAWEKEKAVSFYRDRALPLAVKIGNKKAELRLCNKLVELLLRLKAYEEGLEYAKV
SLSLSVNLGDQLNERIAYHRLAAIHHRLGQCELAEHFYLKALSLCSSPLEFDEETLYYVK
VYLVLGDIIFYDLKDPFDAAGYYHLALAAAMDLGNKKAQLKIYTRLAIIYHHFLVDREMS
LFFYQKARTFATELNVRRINLAPDQYCRNAALVPLKDVL
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atggagctctctgcgcttggagtggaaagcagctcttctgttcctgggcttgacagtact
tcagaggaaaagggattccctagcactgctccgtatttggagcagaaacaaaacagccat
ggagaaggaaataagcagctgctggaaaggagtacatctgattgtgcaagtttggtgacc
aatggtttcatgcccacagcagttggcacagaaaaggaggtgtgtttgcaagggcaaaat
gacttttctaagaatgataaacattcaaatatcagttcaagaataatgtcaagtccagct
gagagtattccaacagatatatcactgaggttatccatggtaagacaaaagactggactt
catgatcatcagcttcaaggagaactgagaggacgactccgcctcctggaaaatgacagc
agggaggtcatggcagcttttagtgagctgtctgccagactgttgtctattcatagtgac
caagaccgaatagtggtgacctttaaaacttttgaagagatatggaaatttacaacctac
tatacccttggttttgtaaatcactgcatggagaacttgttgctggatcagtctttctgg
ctctcttcacaagagaagaataacggtaaacaagaagaagccagaattgaagtctctata
aatgaagagtctctacatttgatgtacagaggtcttttaatgcaggaagggacattcttt
gtcttgtgttctgacaacctcataaaagaggtgacagctgcagatactgtagcgaaagtt
tatcagaatgagtttgtgactgaagacacatctggtggatcactgagtgatgacctgact
ttagacaataaagtcactacagaacctttgattccttttcatcagtggtttcttaaagtc
tgttctgattctattgattttgcttgcaaaacaaattctcaacccagtgagcaaattgca
acaggatcttctctagcagtgaccagctacgaaagtgctgctcctgaagagattagcttc
cagaagggggacaaaattgaaatcattggctacttcattgaatgcatgccatggtttatt
ggaaggcatgtatttactggtcaaattggttttgtaaagacaactcatgttatacctgac
acctctagaactgactcccaaaatttggattttctggaagaggaagagaaattgtttctc
gccaaagaaaaaaatgctgtggaagaggatgtgattcgtttagtaaagcaaacattaaat
acagaagttttcactgtatatagaatagatggattagaacaattggaatttcagaagcct
tatgagcacgacttttcacatcactcatctcgcccagagttcagtagaacgaagaaggtg
aaagaattcctgatgaagtgtaaagattcacagctccagttggaaaggacagtgagtcaa
gaaaaggatttttataggtcttcaaataaagagaccattcccatgtctgaagaaccacgt
ttctccatacatcaagataaagatgatctggagtctgaggtccttcagtctttgttactg
tttttaaacagtcaagagtatgtgagagacttcaaaaatctctatgacttctcattccca
tttctgagcaccacattttatggctatagtggtgaggatgaactagttgactattttaga
ttggcaagagaggcagcaaaaaaagcaaatatgccttgggccctgatgaggctatgcttt
cttttgggtagactgagtgttagaaagctgaaattttctcaagcacgggtttattttgaa
gaagccatgggagcaatgaaaggagattttggtgacctgtatctggttatcgctctttat
acaaatctaacagctatttacttgaagcagaagaacaaagaaaaaagcgctcgcattttt
gacaaggccgcatccctgcttgtggggattcccaactgtgtttgcagcactgacatggag
tcggatattttaaggaatgccttaaagaggacagtagtgagtcggagcaagcatgcagag
gctagagcatgctttcttttggtaaaacattacacaaaacttaaacagtacgaagaggct
ctaccatttctagaaaggctgcaattattgaataatgagctgggtttgcaaaacagctcc
ttgtcagtcaactgctattttaaactgggtgaattctacagtcagaaatacttgccacac
attgtgctaagctgcgtaaggattgcttcttcccagggctcaggtactctaatcagttgt
ttgagaagcattgatttggttatgaaaaatgcacccaagctgtatcagcttagaaaagca
ggacaaacactcccatcacaaattgcaccttacctcagacacacacttgcctcagtattt
accaatgaacagcaaaaactatatagcacaatttgtcttggcttagcagaactgtacagg
catcacagacaatatgggaaggccattgtttgtatggagaaagtactggactccaatact
tcacccagtgccgaagaaactattaaccacttagttttacttgcttggttatatattctg
cacagacaaaatgctgatgctttggtcattttaaatgctatagcagactctttctgtgga
agtctgcaacagttaggagttatttataatatgattggtattgctttgaaaagagtggag
aatataaaagaagcagctgagaactactacaaagctttacaaatctcaaaagagactaaa
atgacccataaccaagctgttgttttgtccaattttgggatgctatgtctggattcagct
gctaccaatttggcagagcgctacttcatcaaagccatgaagctgttctcaaggcttcca
agcatggattgtggcagagattttattcaagtcctcctccaactgggatcctattatgtt
aatggcacctataaggaaaaaggactattttattatgaatgggcctttttggtagcgatg
gaaacaaataatttggaaagtcagctccaagctattcagctgctgtgccaattctacagt
agagttgctccagatggagcccagtgtgtcatctacaatgaatataaattatcactagct
agaaaaatgtctgacaaagttttggagggacaaattttggaaaccatcagtcagctgtat
ctctctttaggcacagaaagggcctatagatctgcactggaatataccaaaagaagccta
ggaatatttatagatcttcagaagaaagagaaagaggcctatgcctggcttcaagcagga
aagatatattacattctgagacagaatgaactagtggatctctatatccaggttgctcaa
gatgctgctctttatactggggatccaaacttaggaatggagttattcgaagctgcaggc
gacatatttttcaatggtgcctgggagaaggaaaaagcagtgtctttctacagggacaga
gctcttccacttgctgtaaagatcggaaacaaaaaggccgaacttcgattgtgcaacaaa
ctagtggaactgctgttgaggctaaaggcttatgaggaaggcctggagtatgcaaaagta
tctctctcactcagtgtgaatttaggagatcagctaaatgaacgaatagcatatcatcgg
cttgctgccatccatcatcgccttggtcagtgtgaacttgctgaacacttttacctgaaa
gcgttgtcactctgctcgtctcctctggaatttgatgaagagacactgtattatgtgaag
gtctatttggtcctaggagacattatattctatgacctaaaggatccttttgatgcagca
ggatactatcatctggcacttgcagctgctatggacttggggaacaaaaaggctcaattg
aagatttatacaagacttgcaattatctaccaccacttccttgtggatcgggagatgtca
ctgtttttttaccagaaggcaagaacctttgcaacggagcttaatgttcggagaataaac
ttggcccccgatcagtattgtaggaatgcagcattggtacctctgaaagatgtcctgtga
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