Gavialis gangeticus (Gharial): 109304118
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Entry
109304118 CDS
T07453
Name
(RefSeq) desmoglein-1-like
KO
K07599
desmoglein 4
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109304118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ggn04515
]
109304118
Cell adhesion molecules [BR:
ggn04515
]
Cadherins
Major cadherins
109304118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_FAT4_N
Motif
Other DBs
NCBI-GeneID:
109304118
NCBI-ProteinID:
XP_019382171
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MDWPLHRTAAVVFLFMVFLDISTGFHVQVKEINENGVQRWKTFRRQKREWIKFAAACREG
EDNSKRNPIAKIRSDCEENNPIIYSISGDGIRENFVINPRTGEINITRIVDREVTPGFLI
HCFAKHALTGIDLEPPLELQVRILDINDNPPIFTQSVFTGSIEECSMDNTLVLKITATDA
DEPNNLNSKIAYKIESMDSSGSMFVLNKYTGEVHLASMLDREQQSSYSLVVRASDRDGAA
DGISSSASCIVKVLDVNDNFPTIAQSSYSAQISENSLSSELLRIQALDADEEFSDNWLAE
FYFLSGNEDNCFEIVTDRATNQGILRVIKELNYEHLSTRPLSIAVRNVNAFHKSVATSYK
PAGVLCVIEVQNEVEGARFYPSEMTCPVSGSISANQVLGIYSATDEDTGQIATNIRYMMG
HDTANLFWIDSRTGKLIVKKAVNQQSTFFTKGEYKAEVLAITIGEPVKTATGTIVLRVSD
FSSDCPTLNIQMRDMCMDSPSIVIKAQEQDGAPYTFSIDGQPHKVWRIRSINDYSAQLVA
QNMEYAVYKIPVYVTDRRGRRCVQPHLIPVRACRCDTSRRCTEGATRVIIIKGSGIGTGG
GGGGGAGGGGGGAGGGGGSAGGGGSAGGGGGSIDGGDGGTIYDDSDTGFTGTISEGTGTT
VGYSEYGVSSIYEDTSRFGGFQPGARFGGLTTLSAAAVGLMFLGGLILVLIPILMSMCDC
CGCGPGPTSGAGIGFEPVPEYTEGAIHSWGIEGAQPEDRDVSNILLPATTDPPGDFADPS
DIYTNAYGGGVTAGSGFEETTGLGTGHQPTDYGTATGYATAGAISGTMDRKGVFGGTVKE
YSEGGMNMTFLENYFSEKAFAYADEDEGRPANDCLLIYDHEGIGSPVGSIGCCSFIGDDM
DDTYLDRLGPKFKTLAEICLGREIEPIPVLNATFPSPEVDLNLPPPGTTIIVNGSVPMPP
TAGSTTVVTENTYTSASAMQPARPVPDPLLHGNVRVTETYTTGPPTHSVDPLLTPNVVVT
ERVVGPASDLRGILDIPNITDGSNVVVTERIITPNSRVPASLSIPDLADGSNVVVTERVI
RPASGIQSSLSIPSELSNAHNVVVTERVVSGPGMTSMGGMSGISQMLGSDAHFTQTLGSA
SPGTARRRVANYRTVQYSNQ
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggattggccccttcacagaacagctgctgttgtgttcttattcatggtattcctggac
atcagcacagggtttcatgtacaggtgaaagaaataaatgaaaatggtgtgcaaagatgg
aagaccttcagaagacaaaaacgtgaatggatcaaatttgctgcagcttgtagagaagga
gaagataattcaaaaaggaatccaattgccaagatccgttcagattgtgaagaaaacaat
ccaattatatatagcatcagtggagacggaattcgagaaaacttcgttattaatccaaga
actggagaaattaatataacgagaatagttgatcgggaggtgactccaggatttcttatt
cactgttttgctaaacatgcattgactggcatagatttagaaccgcctcttgaacttcaa
gtcagaattctggatataaatgacaatcctccaatttttacacaaagtgtatttacagga
tctattgaagaatgctctatggacaacactctggtgctgaaaataactgcaacagatgca
gatgaaccaaataacttgaattcaaaaattgcctacaagatagaaagtatggattcttcc
gggtcaatgtttgttctgaacaaatacactggagaagttcacctagcaagcatgcttgat
cgagagcaacagtcaagttacagtcttgttgtgagagcctctgaccgggatggagctgca
gatggaatttcatcctctgctagttgtattgtgaaagttcttgatgtaaatgacaatttc
ccaactattgcacaaagctcatattcagcacaaatttcagaaaattcacttagttcagaa
ctgttacggatacaagctttagatgccgatgaagaattttcagacaattggttggcagaa
ttttactttttatctggcaatgaagacaactgctttgaaatagttacagatcgagcaaca
aatcagggaattctgagagttattaaggaactgaattatgaacacttgtcaactcgccca
ctgagtattgctgttagaaatgtaaatgcattccacaaatctgtagctacttcttacaaa
cctgctggagttctctgtgttattgaagtgcaaaatgaggttgagggggcaagattttat
ccgtcagaaatgacctgtcctgtatcaggaagcatatcagctaatcaggttttgggaata
tattcagccacagatgaagacactggacaaattgccacaaatatcaggtatatgatggga
catgatacagcaaatctattttggatcgactcacgcactggaaaactcattgtgaaaaaa
gcagttaatcagcagtcaactttttttaccaagggggaatacaaagcagaagttctggct
attactataggtgaacctgtaaaaactgccactggtaccattgtgcttagagtttcagat
ttcagtagtgactgtccaactcttaatattcaaatgagggatatgtgtatggattcacca
tcaattgttatcaaagcacaagagcaagatggtgccccatatacctttagcatagatggt
cagcctcacaaagtatggcgtatcagatccataaatgattattctgcacagctggtggct
cagaatatggaatatgctgtttataaaatccctgtctatgtgacagaccgcagaggtaga
agatgtgtacaaccacatctaataccagtcagagcctgtcgctgtgataccagcagaaga
tgtacagagggtgctaccagagtaattattattaaaggcagtggaattggcactggtggt
ggcggcggcggcggcgctggtggtggcggcggcggcgctggtggtggcggcggcagcgct
ggtggtggcggcagcgctggtggcggcggcggcagcattgatggtggtgatggtggcact
atttatgacgacagcgacactggttttaccggtaccatcagtgaaggcacaggtacaacc
gttgggtatagtgagtatggtgtaagcagtatttatgaagataccagccgttttggtggc
tttcaacctggagcaagatttggtggacttactacacttagtgctgctgctgttggcctg
atgtttcttggtggcttaatacttgtattgattccaattttgatgtcaatgtgtgattgc
tgtggttgtggaccaggacctacaagtggagctgggattggatttgaacctgtacctgaa
tacacagaaggggcaattcattcatggggaatagaaggagcacagccagaagacagggac
gtttcaaatattctcctaccagcaactactgaccctccaggtgactttgctgacccttct
gatatttatacaaatgcatacggaggaggagtaacagcaggttcagggtttgaagaaact
acagggcttgggactggtcatcaacctacagattatggaacagctacaggttatgcaaca
gctggtgcaatttctggaacaatggacagaaaaggggtctttggagggacggtaaaagag
tacagtgaaggaggaatgaatatgactttcttagaaaattacttctctgagaaagcattt
gcctatgcagatgaagatgaaggtcgaccagcaaatgattgtctcctaatatatgatcat
gaaggaataggcagtcctgttggttccattggctgttgtagttttattggtgacgatatg
gatgacacctatttggataggttaggaccaaaatttaagactctggcagaaatctgtttg
ggcagagaaatagagcctattccagttcttaatgctacctttccaagtcctgaagttgat
ctaaatctgccaccacccggaaccactatcattgttaatggatctgtaccaatgcctccc
acagctggcagtacaacagttgttactgaaaatacctatacatctgcatctgctatgcag
cctgcaagacctgtacctgatcctttgctccacggtaatgtaagagtgactgagacttac
acaactggcccacctacacatagtgttgatcctcttcttacaccaaacgttgtggtaaca
gaaagggtggttggtcctgcctctgatttgcgtggcatactagatatccccaatataaca
gatgggtcaaatgttgttgttacagaaagaataatcacacccaattccagggttcccgct
tctttgagtatccctgatctggcagatggttcaaatgtagtggtgacagaaagggtaatt
agaccagcgtcaggtatacaaagcagtttaagtattccctccgagttatcaaatgcccat
aatgtagttgttacagagagagtagtttctggtcctggcatgaccagcatgggtggcatg
agtggtattagtcaaatgttgggctcagacgcccattttacccagacccttggatcagct
tcccctggaacagctcgaagaagggtggcaaactatagaacagtacagtattctaatcaa
taa
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