Gavialis gangeticus (Gharial): 109304163
Help
Entry
109304163 CDS
T07453
Name
(RefSeq) general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109304163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggn03021
]
109304163
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
109304163
Prokaryotic type
Archaeal type
TFE
109304163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE-A_C
TFIIE_alpha
Zn_Ribbon_TF
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
109304163
NCBI-ProteinID:
XP_019382197
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MGDQNIITEVPAALKRLAKYMVRGFYGVEYSLALDVLIRYPCVKEDTLLQLLKYERKQLR
TILNTLKADKFIKLRMRVETGPNGKSTRHNYYYINYKVLVDIVRYKLDHIRRKIEADERD
STTRSSFKCPSCFNTYTDLEVNQLFDTFTETFRCTYCNAEVEEDGSALPKRDARTLLAKF
NEQIEPIYALLRETEDVVLPYDLLEPPPTEIPELSESFDQKIYTNVLDINIRPEKWANKN
SSVSDMYVQNLVIDVQDSEPKKEKEKVAKEQPIWMSQSTVEEASSAVDTNAETPKTDENV
KESITDNEVIKTLLIHESKSSSGTKHVPPLAQSKCHESESDTSESEEDTKHVKPRQGKVV
GSDLEQEEQETVDPTVMVAGQPHLYSEVSENPELVSFMTREEREAYIKVGQEMFQSVFE
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcaaaacattattacagaagtccctgcagctttaaaacgcctggccaagtac
atggtgcgtggcttctatggggttgagtactccttggcccttgatgtgttgatcagatac
ccctgtgtgaaggaagacaccttgttgcagctactcaagtatgaacgcaaacagctgcgc
accatcctcaacacactcaaggcagataagttcatcaaattgcgcatgagagttgaaact
gggccgaatgggaagagtacaaggcacaattactactacatcaactacaaggtgttggtg
gacatagtgaggtacaaactggatcacattcgccggaagatagaagcagacgagcgggat
tctaccactaggtcctctttcaagtgtccatcttgcttcaacacttacacagacctggag
gtaaatcagctgtttgacacattcacagagacttttcgttgcacctactgcaatgctgaa
gttgaggaagatggctcggcgcttcccaaacgagatgctagaaccttgctagcaaaattc
aatgagcagattgagcctatctatgcgcttctgcgggaaactgaagatgttgtcctgcca
tacgatttgcttgagcctccgccaacagaaatcccagaactatcagaaagctttgatcag
aagatctacacaaacgtgttggacatcaatatccgtcccgaaaaatgggccaacaagaac
tcgtctgtcagtgacatgtatgtccagaacctagttattgatgtccaggattctgaacct
aaaaaagaaaaagaaaaggtggccaaagagcaacctatatggatgtcccagagtactgta
gaagaagcatcttcagcagttgataccaatgctgaaacacctaaaactgatgagaatgtt
aaggaaagcatcactgataatgaagtaataaagactcttctcatccatgaatcaaagtca
tcttctggaacaaagcatgtgccacctcttgcccaaagcaaatgtcatgagtcagaaagt
gacaccagtgaatctgaggaggatactaagcatgtcaaaccaagacaaggaaaagtggta
ggcagtgacttagaacaagaggagcaggaaactgtggatcctactgtaatggtagctgga
cagccccacttatatagcgaagtcagtgaaaatcctgagctagtgtcatttatgacaagg
gaagagagagaagcttatatcaaagtgggacaggaaatgttccagtctgtctttgaatag
DBGET
integrated database retrieval system
