Gavialis gangeticus (Gharial): 109304197
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Entry
109304197 CDS
T07453
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3
KO
K06099
cold shock domain protein A
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109304197 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109304197 (YBX3)
03041 Spliceosome [BR:
ggn03041
]
109304197 (YBX3)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
109304197 (YBX3)
Spliceosome [BR:
ggn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109304197 (YBX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Rho_RNA_bind
Motif
Other DBs
NCBI-GeneID:
109304197
NCBI-ProteinID:
XP_019382220
LinkDB
All DBs
Position
Unknown
AA seq
234 aa
AA seq
DB search
MASRFSVKKLTSCVCSFYFSATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNN
PRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYYGRRRG
PPRSGIEGEIKDGITEGAQLQQPIHRNPTYRPRYRRGPPRPHPAPVAGEADNKENQHEAN
AVNQQSPRRGYRRPYNYRRRPRPPNAPSQDGKVTKVAETPAENPAPVTEQSGAE
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcatctagattttcggttaagaaattgacttcttgtgtatgttcattttatttttca
gctactaaagttcttggcactgtcaagtggttcaatgtcagaaacggatatggctttatc
aacagaaatgataccaaagaggatgtgtttgttcatcagactgcgatcaagaagaacaac
ccacggaaatatctgcgcagtgttggcgatggagagactgtagaatttgatgtggttgaa
ggagagaagggtgcagaagcagctaatgtgaccggtccagatggggtccctgtagaaggc
agccgctatgctgcagaccgacgtcgctaccgacgtggctattatggccggcgtcgtgga
ccacctcgtagcggtattgaaggagagatcaaggatgggatcacagaaggagcacaactc
caacagccaatccatcggaatcccacttatcggccccgctaccgcagggggcccccacgt
ccacatcctgctccagtggctggagaggctgacaacaaggagaaccagcatgaggccaat
gctgtgaaccagcagtcacctcgtcgtggttaccgtcgtccatataactatcggcgtcgt
ccccgtccacccaacgctccatctcaagatggcaaagtgaccaaggtggccgaaacacca
gctgagaaccctgctccagtgaccgagcagagtggtgctgagtaa
DBGET
integrated database retrieval system
