Gavialis gangeticus (Gharial): 109304379
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Entry
109304379 CDS
T07453
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109304379 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggn03000
]
109304379 (ARID1B)
03021 Transcription machinery [BR:
ggn03021
]
109304379 (ARID1B)
03036 Chromosome and associated proteins [BR:
ggn03036
]
109304379 (ARID1B)
Transcription factors [BR:
ggn03000
]
Eukaryotic type
Helix-turn-helix
ARID
109304379 (ARID1B)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109304379 (ARID1B)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109304379 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
109304379
NCBI-ProteinID:
XP_019382430
LinkDB
All DBs
Position
Unknown
AA seq
1823 aa
AA seq
DB search
MVMKRPQLYGMGNNPHSQTQQSSPYPGQSYGPPGPQRYPMAMQGRTPAAMGGMQYPQQQM
PPQYGQQGVSGYCQQGQQPYYNQQPQPQHLPPQAQYLSQAQQRYQTQQDMSQEGYGTRSQ
PPMAPGKPNHEDLNLIQQERPSSLPVEVLASEDATFGHKDLSGSIDDLPTGTEATLSSAV
SASGSTSSQGEQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIP
GSQMPPQPSGSQSESSSHPALSQSPMPQDRGFIASMQRNPQMSQYGPQQTGPSMSPHPSP
GGQMHPGIGSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPNTSYSGPGPGMGINANS
QMHGQGPSQPCGTMPLGRMPSAGMQSRPFPGNMSSMTPNSPGMSQQGGPGMGPPMPTVNR
KAQEAAAAVMQAAANSAQSRPPYIRSPAYPSQSGAGGRPMFSSQHPNYGNAQAPMMHQPD
QYGQGSFPGMNQSGIMGSSSPYTQPMNNSSSLMNPQAPPYSMAPNMVNSSTAPMGLADMM
TPGESKLPLPLKADGKEEGPPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISS
FHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKIYELGNEPERKMWVDRYLTFMEERG
TPVASLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSSAASSLKKQ
YIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQSTGSNSMT
EVPGDLKPPTPASTPHGQMTPIQGGRNSAVSVHDPFSDVSDSAFPKRNSMTPNAPYQQGI
NMPDMMGRMPYEPNKDPFGGMRKVPGSNEPFMTPGQMPNSGIQDMYNQTPSGAMSNMSMS
QRQQFSYGSGYDRRHEPYAQQYPGQGPPSGQPAYGGHQPGMYPQQQNYKRHMDGMYGPPA
KRHEGEMYNMQYGNQQQEMYNQYSNTYSGPDRRPMQGQYPYPYNRERMQGPGQIQQHGIP
PQMIGGPMQSSSTSEGPQQNMWPTRNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPD
QRINHESQWPSHVNQRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAPSPASFQRS
LENRMSPSKSPFLPSMKMQKVMPTVPVSQVTGPPPQPPPIRREITFPPGSVEASQPVLKP
RRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLEL
LVEYFRKCLIDIFGILTEYEVGDPGKKALDHNTAKKDDSQSLAEDTVKEEDNDECINYFD
DEEEEEDEKSEGEEKSIVFSTPGAIADPSERPKQASKFDKLPIKIVKKNNLFVVDRSDKL
GRVQEFDSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRKAPPPLNSPNKKKDLEGKGESE
EQQEKSITATIDDVLSARPGALPEDSSSGSQAESSKFPFGIHQAKSHRNIKLLEDEPRSR
DETPLCAITHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHP
ERKRAPQTYEKEDEEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICL
PILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFS
RQEKLYATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDG
VTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDIS
ISAVLNSLVASVICDVLFQIGQL
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgaagagacctcagctatatggaatgggcaataaccctcattctcagacacag
caaagcagtccatacccggggcagtcatacggccctccaggtccccagcgatatccaatg
gcaatgcagggacggaccccagctgccatgggtggaatgcagtatccacagcaacagatg
ccacctcagtatggtcagcaaggtgtaagtggctactgccaacagggccaacagccatat
tacaaccagcagccacagcctcagcatctgccaccccaggcacagtatctgtcacaggcc
cagcagaggtaccagacacagcaggacatgtctcaggaaggctatggaacccgatcccaa
ccccctatggccccaggaaagcccaaccatgaagatctaaacctcatacaacaagaaaga
ccatcaagcttaccagttgaagtcttggcctcggaggatgctacatttggacacaaggat
ttatctggctccattgatgacttgcccactggaacggaggcaacactgagttcagcagtt
agtgcatcaggttctacaagcagccagggagagcagagcaaccctgcacagtcacctttt
tcacctcatgcttctccacatctctccagcatccctggtggtccatcgccttcccctgta
ggctctcctgttggaagcaatcagtcacgatctggtccaatttctcctgcaagtattcca
ggcagtcagatgccacctcaaccttctggcagccagtcagaatccagctcccatcctgct
ttgagccagtcaccaatgccacaagatcgaggttttatagcaagtatgcaaaggaaccca
caaatgtcccagtatggacctcagcaaactggaccttccatgtcgccgcacccttcacct
ggaggccaaatgcatcctggaattggtagctttcagcagagtaattcaagtggaacgtat
gggcctcaaatgagccagtatggaccacaaggaaattattccagaccaccaacatacagt
ggggtgcccaacacgagttacagtggcccaggacctggcatgggtataaatgccaatagt
cagatgcatggacaggggccaagccagccttgtggaaccatgcccctgggacggatgcca
tcagctgggatgcagagcagaccatttcctggaaacatgagcagtatgacccccaattct
cctggcatgtctcagcagggaggtccgggcatgggcccaccaatgccaactgtgaaccgt
aaggcacaggaggcagctgctgcagtgatgcaggctgctgcaaactccgctcagagcagg
ccaccatacattaggtcgcctgcttatcccagccagtctggggctggcggacgccccatg
ttttcttcacagcaccccaactatggcaacgctcaggctcccatgatgcaccagcctgat
cagtacgggcaaggcagttttcctggcatgaatcagagtggtattatgggatccagttct
ccttatacccagccaatgaacaacagctctagcctgatgaacccgcaagctcctccttac
agcatggcacctaacatggtgaacagttcaacagcacctatgggtcttgcagatatgatg
acacctggtgagtccaaactgcccctccctctcaaagcagatggcaaagaagaaggaccc
ccacagcctgagagcaagtcaaaggatagctacagctcacagggtatttctcagccccca
accccaggcaacctgccagtcccttccccaatgtccccaagctctgctagcatctcctca
tttcatggagatgaaagtgatagcattagcagcccaggctggccaaagactccatcaagc
cctaagtcaagttcctccaccacgactggagagaagatcacaaaaatctatgagctggga
aatgagcctgagcgcaaaatgtgggtagatcgatacctcaccttcatggaagagagaggc
acacctgtggccagtctgccagctgtgggcaaaaagccactagatctgttcagactgtat
gtctgtgtcaaggagattggaggcttagcgcaggttaataaaaacaagaagtggcgcgaa
ctggcaaccaccctgaatgttggtacgtcgagcagtgcagccagctccctgaaaaaacaa
tatattcagtacctgtttgcctttgagtgcaagattgaacgaggggaggagccccctcca
gaggtcttcagcactggagatactaagaaacaacctaagattcagccgccatctcctgct
aattccggttccctgcaaggtccacagactcctcaatctactggtagtaattccatgaca
gaagtgccaggcgacttgaagcccccaacaccagcatcaacacctcatggacagatgaca
cctatacagggtggcaggaacagcgcagttagtgtgcatgatcctttctctgatgtaagt
gactcagcattcccgaagagaaactccatgacgccaaatgcaccgtaccagcaggggata
aacatgccagatatgatgggaaggatgccctatgaaccgaataaggacccttttggtggg
atgagaaaagtgcctggaagtaatgagccgttcatgacccctggacagatgcccaacagt
ggaatacaggacatgtataaccagacgccatctggagcaatgtccaacatgagcatgagc
cagcgacagcagttctcttatggaagtggctatgacaggaggcatgaaccatatgcacag
cagtacccaggacaaggacctccttcaggacaaccagcatatggaggacatcaacctgga
atgtatccacagcagcagaactacaagcgtcatatggatggcatgtacgggcccccagca
aaacgccacgaaggagaaatgtataacatgcagtatggcaaccagcagcaagaaatgtat
aaccagtacagcaacacttactctggaccagacaggaggcctatgcagggacagtatcca
tatccatataacagggagaggatgcagggcccaggacaaatacagcagcatggaatacca
ccccaaatgataggcggccccatgcagtcatcatccaccagtgaaggtcctcagcaaaac
atgtggccaacccgaaatgatatgccttacccttaccagaacaggcaaggccctggaggc
cccacacaggccccaccctatccagggatgaatcgcactgatgatatgatggtacctgat
cagaggataaaccatgagagtcagtggccttctcatgtcaaccaacgtcagccttcttat
atgtcatcctcagcctccatgcagcctatcactcgacctcctcagtcgtcctaccagaca
ccaccctcaatgccaaaccacatctctagggctccaagtccagcatctttccagcgctct
ttggagaatcgtatgtctccaagcaagtctcctttcctaccctctatgaagatgcaaaag
gttatgcccacagttccagtatcacaggtcacaggtcctccaccccagccaccacccatt
aggcgagaaattaccttccctccaggctctgtagaagcatcgcagccagtcttaaaacca
agacgaaagattacctcaaaagatattgtaactcctgaagcctggcgagtgatgatgtct
ctaaaatctggccttttggctgaaagtacctgggctctagacacaattaatattcttctg
tatgatgacagcactgttgctactttcaacctctctcagttatctggatttcttgagctt
ttggtggaatattttagaaaatgcctgattgacatttttggaatccttacggaatatgaa
gtgggagatccaggaaaaaaagcacttgatcacaacacagccaagaaagatgacagccag
tccttagcagaggacactgtaaaagaggaggataatgatgaatgtattaattattttgat
gatgaggaggaggaagaggatgaaaaatctgaaggagaagaaaagagcattgttttttcc
actcctggtgccattgctgatccaagtgagaggccaaaacaagccagtaaatttgacaag
ctgccaataaagattgtaaagaaaaataatctatttgttgtagaccgatctgacaaactc
ggacgtgttcaggaatttgacagtgggctcctccactggcagcttggtgggggtgacaca
actgaacacatccagactcattttgaaagcaagatggagattcctccacgcaggaaagca
cctcctcccttgaactctccaaacaaaaagaaggatttggaggggaaaggtgaatctgaa
gaacaacaggaaaaaagtataacggccaccattgatgatgtcctctcagctcgaccagga
gcgttgcctgaagactcgagctctggttcccaggcagagagcagtaaatttccctttgga
atccatcaagccaaaagccaccggaatattaaactgctagaggatgagccaaggagccgg
gatgagactcctctatgcgccataactcattggcaagactccttggccaagcgctgcatc
tgtgtgtcaaatattgtccgtagcttgtcttttgtgcctggcaacgacgccgaaatgtcc
aaacatccaggcttggtgctgatcttgggaaagttgatccttcttcaccatgagcatcca
gaaagaaagcgagcaccacagacatatgagaaagaggacgaggaggacaaaggggtggcc
tgcagcaaggatgagtggtggtgggactgcctcgaagtcttgagggataatacattggtc
acgttagccaacatttctggacagctagacttgtctgcttacacagaaagcatctgtttg
ccaattttggatggcttgctgcactggatggtgtgcccatctgcagaggcacaggatcct
tttccaaccgtggggcccaactcagtcctatcacctcaaagacttgtgctggagaccctg
tgtaagctcagtatccaggacaataatgtggaccttatcttggccactcccccattcagt
cgtcaggagaaactctacgctactttagttaggtacgttggggaccgcaaaaacccagtc
tgccgagaaatgtccatggctctcttatcaaaccttgcacagggggacacattagcggca
agggcaatagctgtgcagaagggaagcatcggaaacttgataagcttcctggaagatggg
gtcacgatggcccagtaccagcagagccaacataacctcatgcacatgcagccgcctcct
ctggagccacctagcgtagacatgatgtgcagggcagccaaggccttgctggccatggct
agagtggacgagaaccgttcagagttcctattacacgagggtcgtttgctggatatctca
atatctgctgtcctgaactctctggttgcatctgtcatctgtgatgtactttttcagatt
gggcagttatga
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integrated database retrieval system
