Gavialis gangeticus (Gharial): 109304457 Help Entry 109304457         CDS       T07453                                  Symbol POLQ Name (RefSeq) DNA polymerase theta isoform X1   KO K02349   DNA polymerase theta [EC:2.7.7.7] Organism ggn  Gavialis gangeticus (Gharial) Brite KEGG Orthology (KO) [BR:ggn00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ggn03400]     109304457 (POLQ) Enzymes [BR:ggn01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      109304457 (POLQ) DNA repair and recombination proteins [BR:ggn03400]  Eukaryotic type   Other factors with a suspected DNA repair function    DNA polymerases     109304457 (POLQ) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII Helicase_dom4_arc DUF4332 HHH_5 PIN_9 Motif Other DBs NCBI-GeneID:  109304457 NCBI-ProteinID:  XP_019382601 LinkDB All DBs Position Unknown AA seq 2607 aa AA seqDB search MAWREHGGAAAFSAAPRRAPPPPRRPVLSPPGPSPSGQCQQMNIPEDQADKLLLASWGLP KAVLEKYHSLGVVHMFEWQAECLMLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVLETH KKALFILPFVSVAKEKKYYLQALFQEVGVQVEGYMGSASPAGRFSTLDVAVCTIERANGL INRLIEENQMDLLGMVVVDELHMLGDSHRGYLLELLLTKVRFITEKVTKRQAKASSPASG GIQIVGMSATLPNLHLLASWLNAELYHTNFRPVPLMEWVKIGSNIYDSSMNLVREFQPML QLKGDEDHVVSLCYETVRDGHSVLLFCPSKNWCEKLADIIAREFCNLQLSERKTSNLPPI PLNKEGIEEVMDQLRRSLSGLDSVLQRTLPWGVAFHHAGLTFDERDVIEGAFRQGLIRVL AATSTLSSGVNLPARRVIIRTPVFGGKLLDILAYKQMAGRAGRKGADTVGESILVCKPSE RSKGIALLQGSLKPVRSCLLRREGEGITSSMIRAILEIIVGGVASTPDDVWTYASCTLLV ASLKDNEQGSEKNEDRVQNGAIEACVAWLLQNEFIQVSGPSDGVKAEVYCPTHLGSATLS SSLSPMEALEIFADLQRAMKGFVLENDLHIVYLVTPVYEEWTTIDWYQFFCLWEKLPTSM KRVAELVGIEEGFLARSVKGKIIAKTEKQHRQMAIHKRFFTSLALLDLISEVPLKDITKK YGCSRGQLQSLQQSAATYAGMVTVFSNRLGWHNMEQLLSQFQSRLTFGVHRELCDLVRVS LLNAQRARTLYNTGFVTVVDLAKANPADVETALKNTVPFKSLRRAVDEDEEAAEERRNTR CIWMAGMKHVTEKEAASLIVEEARTLLQQDLAVMGVEWNPDSYLDSESSSSMISSESDLE NRKYRLSREGSFETLKAFNKERYGLHPNSQSGTSAKIEKANKRLLGASTPKCRLQSEAQI DQIQTEEGNNDVIVQSARKRPHLSKDKENMEFTSKRKSRASSRETSQESPTEEGKRSTLR FVPTKNSAICRPRITMGGCLNQSRNCNRALKQHRSLLEESRRQVKGVKGPPLSRHSNCEG KSFPDGSNKELTEKGSLVHKDKISGSFHEHYLLIGSKEKMEGLLMEPFVTKECKPKEKTI CQASRDVIMRDATTVRMETSNTVGGLMVPSRELKNENIIAEDSKVHAGKKYAERISGKQQ MILDTDLCNEIVGSSAKTHESDGTHEQKTVCYEPKSCLFPIQSKGKHSSERPNGILFQSG GVGKAADNQPEDFLRDSTIKSRAVCIAKSSKNGYARDLSLDYRYFEDSFQLDTQTDRIIQ QQVASEIAGHQGAKGTERAAIAVQKTFTKLPCDNAFQTESVADKSLVAAFREMDSSGLVT TLGMKQPADLCCSDKTLGSVSSCLQSAVKFPDAALCLRGNDFSVTDSQLHGFLQGYLTQP SVKESVCLGLQNRAPTSNGQHPNFIHVQVECHPVPETSLNTSNSLLFEDSFSDVNDPSGI RAGEAEGMETREQEILPLPPNTISSSLVGCLHQQSWGPIQGVLSINQVEQQEPPQCNDAS LTFSEIDSFQLAEAFDNVSSPPFQGDLPSAALFEPELRKSVAQEDSGPMDIGGDKSVRLQ KAQQTVKKNTNPIVWSEHSFELSPGLQEILDKWPSPSGNKPASSRPSIPGSKEKLVISNC NQEQGAVFEFGCGQKKPLPLCQGLENYLTGRESNRGALEQKSNCSPQFLKGSSRKCDPQP DISNGLIPPVPPVDPAPKSFGTSSLKSGKKKDVILMNGGPLCQGLQNGIPASDQQIETLQ FNPENGGLLETDSVKDNSVLDQGFSLHLSQDVLPLISCSAESFTIIDVASDMAVFQTFIQ EWRGKNRFAISVACERTKRLLSPRSTIGGGFKQVRSPRQIQVKDDGFPIKGCEDTLIVGL AVCWGGKDAYYVSLQQKADDQAEVSASLAPPALDQNLSVSERLCHLQSCLQKEPEGKHCL VMYDLIQHYKTLLMACGISLEGSFEDPKVACWLLDPDSKECTLHNMVTSFLPHELPLLEG IGTGQGVQSLGLSASADHSGRYRAAIESVLIFGIMNQLNTLLQKENLTDAFCKVEMPTQY CLALLELNGIGFSTVACETQKHIMQAKLNEIETQAYQLAGHSFSLTSPDDIAEVLFLELK LPNGDVKAQGNKKTLGYTRRCTTKGHRVRLGKQFSTTKDVLEKLKTLHPLPGLILEWRRI TNAMTKVVFPLQREKRLNSLLGMERIYPISQTHTATGRISFTEPNIQNIPKDFEIEMPTL VEESPPSQAQRNGSALPGARSRKHYGILPRGSNSMAEEGPKRRGMPFSVSMRHAFVPFRG GLILAADYSQLELRILAHLSDDRRLIQALNSGADVFKSIAAEWKMIDPEAIRDDTRQQAK QICYGIIYGIGAKSLGEQMGVEENDAASYIDSFKSRYKGIQKFLRETVNNCSRDGFVKTI LGRRRYLPAIRDPNPYSKAHAERQAVNTTVQGSAADLVKTATVNIQRRLEAFPSTIKSHG HLENSFQMDRAGRLERRRNRRMLHPITGGFFILQLHDELLYEVAEDDVIQVAQIVKHEME NAMKLSVKLNVKVRIGPSWGDLQDLEL NT seq 7824 nt NT seq  +upstreamnt  +downstreamnt atggcgtggcgggaacatggcggcgcggccgctttctccgccgccccgcgccgggcgccg ccgcctccccgccggcctgtactcagtccccccgggcccagcccctcagggcaatgccaa cagatgaacattcctgaggaccaagcagacaagttgcttctagcaagctggggccttccc aaagcagtcctggagaaataccacagcctgggagttgtgcatatgttcgaatggcaggca gagtgcctgatgcttgggcaagtcctggaggggaagaaccttgtttactcagctcctacc agtgctgggaaaacattggttgctgagttactcattttgaaaagagtcctggagacccat aagaaagctttgttcatcctcccatttgtctctgtggccaaagagaaaaagtattatctt caggctttgtttcaagaggtgggtgtacaggttgaaggctatatgggaagcgcctcccca gctggacgtttctctaccttggatgttgctgtctgcacgattgagagagctaatggtcta atcaacagactcatagaggaaaaccagatggatttactgggtatggtggttgtggatgag ttgcacatgctgggagattctcaccggggttatctgctggaactcctgctgaccaaagtt cgttttattacagagaaagtcaccaaaagacaggcaaaggcaagcagtcctgcttctggt ggaatacagattgttggcatgagtgccaccctccctaacttgcatctgctagcttcctgg cttaatgctgagctgtaccacactaattttcgccctgtgcccctcatggaatgggtgaaa attggcagcaatatttatgactcatcaatgaatctagtgcgggaatttcagcccatgctg caattgaagggagatgaggaccatgttgtaagcctgtgctatgagactgttcgtgatggt cattcagtcctgctcttctgtccatccaagaactggtgtgagaagctggcagacatcata gctagagagttctgcaacctgcagctgtctgagagaaaaacttcaaaccttccaccaatc cccttgaacaaagagggaatagaggaggtgatggaccagctaagacgatcactctcgggt ttggactctgtgctccagcgaactttaccatggggagtagcatttcatcatgcaggtctt acctttgatgaacgggatgtcattgaaggggcttttcgccagggactgattcgagtcctg gcagcaacttctacactttcttctggggtgaatttgcctgcgcgccgggtaattatccga actcctgtgtttggtggcaaactcttggacattctggcttacaagcagatggctgggagg gctggcagaaaaggagcagacacagtgggtgagagcattctagtgtgcaagccctcagag aggtctaaaggcattgctctgctgcagggatccctcaagcctgtccgcagctgcttgctc agaagagagggagaaggaattacttctagcatgatacgagcaatccttgagatcatcgtg ggtggagtggccagcactccagatgatgtctggacctacgcttcctgtacgcttcttgtt gccagtttgaaagataacgagcaggggagtgagaaaaatgaggaccgagttcagaatgga gctatcgaggcttgtgtggcatggctgctgcagaatgaattcatccaggtttcaggccct agcgatggagtgaaagcagaggtctattgcccaacgcatcttggctctgctactctttcc tcttctctttcaccaatggaagccctggaaatttttgctgacctccagagagctatgaag gggtttgtcctggagaatgacctgcatatagtctatttggtcactcctgtatatgaggag tggactacaattgactggtaccagtttttctgcctgtgggagaagctacccacttcaatg aagcgagttgctgagctggtgggaattgaagaaggcttccttgcacgctctgtaaagggt aaaatcatagccaaaacggagaaacagcaccgacaaatggctatccacaagaggtttttc accagcctggcactactggatttaatcagtgaggttcccttaaaagatattaccaaaaaa tatggctgtagccgtggccagcttcagtccttacaacagtctgctgccacctacgcagga atggtaacagttttctctaatcggctgggctggcacaacatggaacagttgctctcccag tttcagagtcgcctcacctttggtgtccatagggagctatgtgacctggttcgagtgtct ctgctgaatgcgcagcgtgccagaactctttataacactggcttcgttactgtggttgac ctggcgaaagcaaatcctgctgatgtggaaactgccctgaagaatacagtgccattcaaa agtcttcgtagggcagtggatgaagatgaagaggcagctgaggagcgcaggaacactcgc tgcatctggatggctggaatgaagcatgtcactgaaaaagaagctgcctcccttattgtg gaggaggctagaacactcctgcagcaggacttggctgtgatgggagtagagtggaaccca gattcttacctggactccgagtcatcctcttccatgatcagcagcgagtcagatctggag aacagaaaatacagactgagcagggaggggtcatttgagaccctaaaagcatttaacaag gaaagatatggacttcaccccaactctcagtctgggacttcagcaaagattgaaaaggca aataaaagattgctaggtgccagtaccccaaagtgcaggctgcagagcgaggcccagata gatcagattcaaacagaggaaggaaacaatgatgtcattgtacagagtgctagaaaacga ccacatttgagcaaagataaagaaaacatggaatttacttccaagagaaaaagcagggca agctccagggaaacaagtcaagaatcccctactgaagaaggcaaaagatcaaccttgaga tttgttccaacaaaaaattctgctatatgtaggccaaggataacaatgggtggatgctta aatcaaagtagaaactgcaacagggctttgaagcaacataggtcactgcttgaagaatca aggaggcaagtaaaaggtgtaaaagggccccctctttccagacacagcaattgtgaaggt aaatcctttccagatggaagtaataaggaactgacagaaaaaggatcattggttcacaag gacaaaatctcaggatcttttcatgaacattatctgcttatagggagcaaagagaaaatg gaaggactgcttatggagccttttgttactaaggaatgcaagcctaaagaaaaaacaatt tgtcaggcatctagggatgttataatgagggatgctacaactgtgagaatggagacaagt aacactgtgggaggcctgatggtacctagtagggagttgaaaaatgagaatattattgcc gaagacagtaaagttcatgctggaaaaaaatatgctgaacggatatctggaaaacagcag atgattctagatacagacctctgtaatgaaatagtcggcagttctgcaaaaacacatgag agtgatggtacacacgagcagaaaactgtttgttatgaacctaaatcctgccttttccca attcaaagcaaaggcaaacatagcagtgaaaggcccaatggcatattgttccagagtgga ggtgtgggtaaagctgctgataatcagcctgaggattttttgagagactccacaataaaa tccagagctgtttgtattgcaaaaagtagcaaaaatggttatgcccgtgatctgtccttg gactacagatactttgaggacagcttccagttggatactcagacagataggataatacag cagcaggtggcatctgaaattgcaggacatcagggagcaaaaggcacagagcgggcagcc attgctgtgcagaaaaccttcacaaaactcccctgcgataacgcttttcaaactgagagt gtcgctgataaaagcttagttgcggcatttagagagatggactcttcaggtcttgtgaca acacttggtatgaaacaacccgctgatctatgttgcagtgataaaactttgggctctgtg agctcttgtttacagtctgcagtgaaattcccagatgctgcactttgtctcagaggaaat gatttttctgtcactgactcccagctacatggctttttacaaggttatctaacccaacct tcagtgaaggagagtgtctgtctaggtcttcagaacagagcccccacctccaatggccag catccaaacttcattcatgtacaagtagaatgtcaccctgttcctgaaactagtctcaat acaagcaatagtttgctgtttgaagatagtttcagtgatgtcaatgacccttctggtatt cgtgcaggtgaagctgaagggatggaaaccagggaacaggagattctacctcttcctcct aacaccatttctagctctcttgttggctgtctgcatcagcagagctgggggcctattcag ggtgtattgagtataaatcaggttgagcagcaggagccaccacagtgtaatgatgcgtct cttacgttctctgaaattgattctttccagttggctgaagcttttgacaatgtgagctca cctccttttcaaggagacttgccatctgcagctctttttgagccagaactaagaaaatct gttgcacaagaggactccggaccaatggacataggaggagataaaagtgtaagactgcag aaagcccaacaaactgtaaaaaaaaataccaatccaatagtatggagcgaacattcattt gagttaagcccagggttgcaagaaattctagacaagtggcctagcccttcaggcaataaa cctgcttcatcgagaccaagcatccctggatcaaaggaaaaattagttatttcaaactgc aaccaagagcaaggtgcagtgtttgaatttggctgtggtcagaaaaagccattacccctt tgccagggtttagagaactatttgacaggtagagagagcaataggggagccttggaacaa aaatcaaattgttcccctcagtttctcaagggaagcagcaggaagtgtgatcctcagcca gatattagcaatgggcttattcctccagtgccccctgtggaccctgcaccaaagagtttt ggcacgtcctctctgaagtctgggaaaaagaaagatgtcatcctcatgaatggaggcccg ctctgtcaggggctgcagaatggcatacctgcttcagaccagcaaatagaaacactgcag tttaatccagaaaatggaggcctgcttgagactgactctgtaaaagacaattctgttcta gaccagggcttttcactgcacttatctcaagacgttttgccacttatttcatgcagtgct gaaagtttcactattattgatgtggcaagtgacatggctgtcttccagaccttcatccaa gaatggaggggcaaaaatagatttgccatctcggtggcttgtgaaagaacaaaacgtctc ttgtcccccagatcaactataggcggcggatttaaacaagtaagatctccccggcagatc caggttaaagatgatggattccctatcaaaggctgtgaagataccttgatagttgggttg gcagtgtgctggggtggaaaggatgcctactatgtctcactgcagcaaaaggcagacgat caggctgaagtcagtgccagtttggcaccccctgctttggatcagaacctatctgtcagt gagagactgtgtcatctccagtcctgcttgcagaaagagcctgagggaaagcactgtctg gttatgtacgacctcatccaacactacaagaccctgctaatggcctgtggcatctccctg gaaggaagctttgaggacccaaaggtagcatgctggctgctggatcctgactctaaagaa tgtactcttcacaacatggttaccagctttctccctcatgaactccccctgcttgaaggg ataggaactggccaaggggtgcagagcttggggcttagtgccagtgctgatcactctggg cggtacagagcagccatagagtctgtgctcatctttggcatcatgaaccagcttaataca ctgttacagaaggaaaacctaacagatgctttctgcaaagtggagatgcccacacaatat tgcttggctctgctggagctgaatggaattggctttagcacagtggcatgtgagacccag aaacacatcatgcaagctaaactaaatgagattgagacccaggcataccagctggcaggc cacagcttctccctgaccagccctgatgacattgcagaggtcttgtttttggaactgaag ttgccaaatggagatgtaaaagctcaagggaataagaaaactcttggttacacaagaaga tgcactactaaaggacacagggtcaggctgggcaagcagttcagtacaaccaaggatgtt ctggagaaattaaagactttacatccattaccaggcctgattctagaatggaggcgaatc accaatgcaatgaccaaggtggtgtttccgctgcagagggagaagcgtttgaattcttta ctggggatggagaggatctatccgatctctcaaactcacacagctacaggtcgtataagc ttcacagagccaaatatccagaatattccaaaagattttgagattgaaatgccaaccctg gttgaagagagcccgccttcccaagcacaaagaaatggctcggctcttcctggagccaga agtagaaagcattatggtatcttgcctcggggctcaaactctatggccgaagagggacca aagagaagagggatgccattttctgtgagcatgaggcatgcttttgttcccttccgaggt ggtttaatcttggctgctgattattcccaacttgaactgaggatccttgctcatttgtct gatgaccgtcggctcattcaggccttgaacagtggagctgatgtcttcaagagcattgcg gctgaatggaagatgattgatcctgaagctattagggatgataccaggcagcaagcaaag cagatctgctatggaatcatctatggaataggagcaaaatctttaggagagcagatgggt gttgaggaaaatgatgctgctagctacattgactccttcaaatctagatacaaaggaatt cagaagttcctgcgggagacggtgaacaactgtagcagggatggttttgtgaagaccatt ctggggaggcgcagatacctgccggctatcagagaccccaacccgtacagcaaagctcat gcagagcggcaagctgtgaatacaactgttcagggttctgccgctgaccttgtcaaaaca gctactgtgaacattcagaggcggcttgaagctttcccctccacaatcaagtcccatgga cacctggagaactcgtttcagatggacagggcaggaaggttagagaggaggagaaacaga aggatgttacaccccatcacgggaggtttcttcatcctccaacttcatgatgagctcctc tatgaagttgcagaagatgatgtaattcaggtagctcagattgtcaagcatgagatggag aacgccatgaagctttcagtgaaactgaacgttaaagtgaggattgggcccagctgggga gaccttcaggacctggagctgtag

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