Gavialis gangeticus (Gharial): 109304539
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Entry
109304539 CDS
T07453
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109304539 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ggn01009
]
109304539 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109304539 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
ggn03029
]
109304539 (RB1CC1)
Protein phosphatases and associated proteins [BR:
ggn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109304539 (RB1CC1)
Membrane trafficking [BR:
ggn04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109304539 (RB1CC1)
Mitochondrial biogenesis [BR:
ggn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109304539 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
109304539
NCBI-ProteinID:
XP_019382750
LinkDB
All DBs
Position
Unknown
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVSDLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTHSYQKLLFKFENVYSSYLQ
SIDDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLESSTDHRGEDSEGTEDGKSA
ELVLFSDIPRTNIKSVVASFCRSVEHSALDSAAPENITDNKESSQNSTIQDNETSLELKE
NDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTHKPRRFDSELPDISLNDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQTSPQSATTPRMES
TTGIATATSSRTPPSLSLQGPLCTPVCPPAPLEELSPDSIDAHTFDFETIGHPSLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNIISDPQSPEMMVESLYSSVINAIDSR
RMQDTNICAKGGLVENASLNICMDKCRVIAQESQTNLKNIKEDLCHFRVLVQKEQCDFSH
SLKCTSVEIRNVIEKVKLSLEKTLTEKHQKELQSLKSEYETKVNKLLEDGEENEKKIKKL
KEDLVGLEEVLQNKDHEFAVVKNEKESVVHLQNEKDQKMLELECQMKNQNYELKELRHSH
EIVLEDMKRLHLENDEKIQVLKAEFQSLEQSHLKELENNLQIRHTQEFERIVSEHKDCLD
ELKKENLHRLEQMQESHAAVVQEKEKQVEELKLKVSDLSDLRCKLEVELALKEAETDEMK
MMLEDSRIQQQETIKSLIDKETESLRKEIDALNLKLQINNDEYQVGLAELRTLMTIEKDH
CISELVNRHEEESNLLRTELSKITSLHQEAFEEKKRLKEQIIELQSKLETEENALEKEKE
KKMALCEQQEKYEAVIHKLEEEKVLLISNQEDDRQLLIQKLSCEKEDAVQIAHKEFELQR
EAVEKELLEKIQQLEMKVNLSPPLELSSESSLVAKLQEELKEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLTREKMKKENIINDLSDKLKMLTQQQERDKDLIETLSEDR
ARLLEEKKKLEEEVSKLRSSNFIPSAYLPAGSETCGACASDLASETDRLASEIVAEGKMD
STMETSMMAVHENIHISEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttcttgtcaacactggaacaacccttacatttgacaccgaactt
gctgtacagaatgtgtctgaccttaaacatgcaatccaaacaaaatataagattgctatt
cagcaccaggtactggttgtcaatggaggggaatgtatggcaccagacagaagagtctgt
agttacagtgctggaacagacacgaatccaatttttctattcaacaaagagatgatctta
tgtgaacgtccacctgctattcccaaaactacgttttcagcagagaatgaaatggaatta
aaggttgaagaatctcttatgatgcctgcagtttttcacacagtagcatcacggacacag
cttgctgtggaaatgtatgaggttgccaagaagctttgctccttttgtgaaggtcttgtc
catgatgaacatcttcagcatcaaggctgggctgccataatggccaatttggaagactgc
acacattcttaccaaaagctgcttttcaagtttgaaaatgtatactcaagctacctgcaa
tctatagatgatattaagctgaaactcacacacttggggacggctgtttctgtcatggcc
aagatcccgctgctggagtgcctaaccagacatagttacagagaatgtttaggaagactg
gaatcttctactgaccacagaggggaagacagtgaaggaactgaggatggaaagtctgcg
gaactagttcttttttctgatattcctagaacgaacattaaatcagtggtagcctcattt
tgcaggtcagtggagcattcagccctggacagcgcagctcctgaaaatatcacagacaat
aaagaatccagtcaaaacagtactattcaggacaatgaaacttcattggaactgaaggag
aatgatcaaccttccttcaatgtctctctgttagactggataaatgttcaggataggcct
aatgatgtggaatcactggtcaggaaatgttttgattctatgagcaggcttgatccaagg
atcattcagcccttcttggcagaatgtcgacagactattgccaaactggataatcagaac
atgaaggctattaaaggcctggaggacaggctgtatgcgctagaccagatgatagctagc
tgcagcagactggtaaatgaacaaaaagaacttgctcagggatttttggctaaccagaag
agagctgagaacttgaaagatccttctgtgctacctgacttatgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacaggaaactgttagatattaagcaaaaatgtacc
actgccaaacaagagcttgcaaataatctacaagttaggctaaaatggtgttgctttgta
atgcttcacgctgaccaagatggggagaaactgcaagccttgcttcgccttgtgacagaa
ttactagaaagggtcaaggtggttgaggctctcagtactgttcctcaaatgtactgtctg
gctgtggttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggctggt
gctttaataaaagatgggaaacatctgtatgaagctgaaaaggcaaaaagggaatcgttt
gggaaattgtttaggaaatcttttttaaggaatcgtttgtttaggggacttgattcctgg
cctccatccttttgtacacacaagcctcgcagatttgatagtgagcttccagatatctca
ttaaatgacttgcagtttctgcagtctttttgtccttcagaagtacaaccattactcagg
gttcctatactttgtgactttgaacctcttcaccagcatgtacgtgcactacataacctg
gtgaaagcagcccagagtttggatgaaatgtctcagaccattacagatctactgaacgag
caaaaggcctccaacagtcagacatcaccacaatctgccaccacgccaaggatggaaagt
acaacaggaatcgcaactgctacctcttctagaacacctccatcactcagtcttcagggt
cctctgtgtactcctgtgtgtccccctgctccattagaggaattgtctccagatagtatt
gatgctcatacatttgattttgaaacgattggccatccaagcttagaacaggcccttaag
caagggtctttagatttggattcactagcagaaagtccagaatcggattttatgtcagca
gtgaatgaatttgtaatagaggaaaatccagtatcccccaatataataagtgatccacaa
agtccagaaatgatggtagagtccctctattcttcggttatcaatgcaatagacagcaga
cgcatgcaagacacaaatatttgtgcaaaaggaggcttagtggaaaatgcttctctaaat
atttgtatggacaaatgtagagttattgcccaggaatctcaaacaaacttaaagaacata
aaagaagacctttgccactttagagtacttgtacaaaaagaacaatgtgacttttcccat
tctttaaaatgtacttcagtagaaataagaaatgttattgaaaaagtaaaactttcactt
gaaaaaacactaactgagaaacatcaaaaagaattgcagtctctgaaaagtgaatatgaa
actaaagttaataaattactggaagatggtgaggaaaacgaaaaaaagattaaaaaatta
aaagaagacttagtaggccttgaagaagttctgcaaaataaagatcatgaatttgcagtg
gtgaagaatgaaaaagaatctgttgttcacctacaaaatgagaaagatcagaagatgctt
gaattagaatgtcagatgaagaatcaaaattatgaacttaaggaactcagacattctcat
gagatcgtactagaagatatgaaaaggcttcatcttgaaaatgatgaaaaaatacaagtt
ttgaaggcagagtttcagagtcttgaacaaagtcacctaaaagaattggaaaacaattta
cagatcaggcatacccaagaatttgaaaggatagtatctgagcacaaagattgtttagat
gagttaaaaaaagaaaacttgcacagacttgaacaaatgcaggaatctcatgctgcagtt
gtgcaagagaaggaaaaacaggtagaagagttaaaactcaaagtttctgatctgtctgat
ttgagatgtaaattagaagttgaacttgcattgaaggaagcagaaacagatgaaatgaag
atgatgttagaagacagcagaatccagcaacaggagaccatcaagtcacttattgataaa
gaaactgaaagtttaagaaaagagatagatgcattaaatctcaagttacaaataaataat
gacgaatatcaagtgggcttagcagagctaagaactttaatgacaattgagaaagatcac
tgcatttcagaattagtgaacaggcatgaagaagaatcaaatttgcttagaactgaatta
agcaaaataacctctttacatcaggaagcttttgaagaaaaaaagagactcaaagaacaa
ataatagaactgcaaagtaagttagaaactgaagagaatgccctagaaaaggaaaaggag
aaaaaaatggctctgtgtgaacaacaggaaaaatatgaggctgttatccataaacttgag
gaggagaaagtactgttaatatctaaccaggaggatgatagacaattgcttattcaaaag
ctcagttgtgaaaaagaggatgcagtgcaaattgcccataaagagtttgaattgcagagg
gaagctgttgaaaaagagcttttggaaaaaatacaacaacttgagatgaaagtaaatctg
agtccccctctcgaattgtcttctgaatcaagcttagttgctaaacttcaagaagaactg
aaagaagagaaaatgaaatttttagagcaacttgaagagcaagagaaaaggaagaatgaa
gaaatgcaaaacattagaacctctttaactgcagagcaacagaccaattttaacacagtt
ctgacgagagaaaaaatgaaaaaggaaaacataataaatgatcttagtgacaagttaaaa
atgctaacccaacagcaagaaagggataaagatttgattgaaacactttctgaagatcgg
gctcgtttacttgaagaaaagaaaaaacttgaagaagaagttagtaaactgagaagcagt
aacttcattccatcagcatatctacctgcaggatcagaaacttgtggagcctgtgcatct
gatcttgcatctgaaacagacagattggcttctgagattgtagctgaaggaaaaatggat
tccaccatggaaactagtatgatggctgtgcatgaaaacatccatatatctgaagaaaaa
cagaggataatgttgctagaaagaacattgcagctgaaagaagaggagaataagcggtta
aatcaaagattaatgtcccaaagcatgtcatctgtttcttcaagacattctgaaaaaata
gctatcagagattttcaggttggcgatttggttctcataatcttggatgaacgccatgac
aactatgtgttgtttactgttagtccaaccttgtatttcttgcattcagaatctcttgct
gcgttggatctcaaaccaggtgagtgtgcttcaggtgcatctagaagaccttgggtgcta
ggaaaggtaatggaaaaggagtattgccaggcaaaaaaggcacaaaacagatttaaagtt
cctttgggtacaaaattctacagagtgaaagcagtgccgtggaacaagaaagtataa
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integrated database retrieval system
