Gavialis gangeticus (Gharial): 109304551
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Entry
109304551 CDS
T07453
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109304551 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggn03021
]
109304551 (POLR1B)
Enzymes [BR:
ggn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109304551 (POLR1B)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109304551 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
109304551
NCBI-ProteinID:
XP_019382771
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MVPKTSICKELKVYPAECRGRRSTYRGKLTADISWSVNGIPKGIIKQPLGYVPIMVKSKL
CNLYNLPPRALIEHHEEEEEMGGYFIINGIEKVIRLLIVPRRNFPIAMVRPKWKSRGPGY
TQYGISMHCVRDEHTAINMNLHYLENGTVMLNFIFQKELFFLPLGFALKALVGFSDFQIF
QELIKGREGNSFYESCISQMLRMVMEEGCTTQKQVLSYLGKCFRVKLNLPEWYSNEQAAE
FLLSQCICIHLKTKVDKFYLLCLMTRKLFAFAKEECMEENPDSLMNQEVITPGQLYLMFL
KERMEAWLLSIKFALNKRAQKTNVTINSENLMKLFSMGIDVTRPFEYLLATGNLRSKTGL
GLLQDSGLCVVADKLNFIRYLSHFRCVHRGAAFAKMRTTTVRKLLPESWGFLCPVHTPDG
EPCGLMNHMTAVCEIVTQSASTLSLPPLLCSLGVTPVDGTPSQTYAECYPVVLDGSLMGW
VEKDLAPEIADILRRFKVLQEKKIPAWTEVVLVPMTGKPSLYPGLFIFTTPCRMVRPVRN
LALGKEELIGTLEQVFMNIAVLEDEIMPGVTTHQELFPHSMLSVVANFIPFSDHNQSPRN
MYQCQMGKQTMGFPLLTYRDRSDNKLYRLQTPQSPLVRPYMYDYYDMDSYPVGTNAVVAV
ISYTGYDMEDAMIVSKASWERGFAHGSVYKTESIDLAEKIKQGDDTLVFGIKADNPKVMQ
KLDADGLPYIGSILQYGDPYYSYLNLNTGESFIVYYKSKESCIVDNIKVCSNDSGSGKFK
TICITVRIPRNPTIGDKFASRHGQKGILSRLWPVEDMPFTESGMVPDILFNPHGFPSRMT
IGMLIESMAGKSAALHGLCHDATPFTFSEKNSALEYFGRMLKAAGYNYYGTERMYSGISG
VELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMERDAL
LAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKPPPSWSATRNRKYCCTVCNQSD
TIDTVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccaagaccagcatctgcaaggagctgaaggtgtacccggccgagtgcaggggg
cgccggagcacctaccgcggcaagctgactgctgacatcagctggtcagtgaatggcatt
ccaaaagggattattaagcagcctctgggatatgttccaattatggtgaagtctaaactt
tgcaatttgtataatcttcctcccagagccttgattgaacatcatgaggaagaagaggag
atgggaggctattttataataaatggtatagaaaaagttattagactgttgattgtgcct
aggcgaaactttcctattgcaatggtaaggcccaaatggaagagcagaggcccaggttat
acacagtatggtatatctatgcattgtgtcagagatgagcacactgcaataaatatgaac
cttcactatctagaaaatggtacggtcatgctgaacttcatttttcagaaagagctgttc
ttcttacctttgggatttgctctgaaggcattagttggtttctcagattttcagattttt
caggagctgattaaaggtcgagaaggcaactccttctatgagagctgcatttctcagatg
ctgagaatggtgatggaagaaggctgtaccacacagaaacaggtcctcagctatctgggg
aaatgcttcagagtaaaacttaaccttcctgagtggtattcaaacgaacaggctgcagaa
tttcttttgagtcagtgcatctgcatacacttaaaaaccaaagttgacaagttctattta
ctttgtcttatgacccgcaagctgtttgcttttgctaaagaagaatgcatggaggagaat
ccagatagcctcatgaatcaggaggtgatcacacctggacagctttacctcatgttccta
aaggagaggatggaagcatggttgctttctattaaatttgccttaaacaagagagctcag
aagaccaatgtaactataaattcagaaaatttgatgaagctattcagtatgggaatagat
gtaacaaggccatttgagtatctccttgctactggtaacctacgatctaaaacaggtcta
ggtctgctacaagattcaggtctgtgcgttgtagcagacaaactgaattttattcgctac
ctctcccacttccgctgcgtacatagaggtgctgcatttgccaagatgagaactaccaca
gtgcgcaaactgctgccagagtcctggggattcctgtgccctgtgcacacacctgatgga
gagccctgcggcctgatgaaccatatgacagctgtctgtgaaatagtgacacagtcagcc
tctacactgtccctgccacctttgctgtgctcattgggtgttaccccagttgatgggact
ccaagccaaacttatgcagagtgttacccagttgtactggatggttccttgatgggctgg
gtagagaaagatttggctcctgaaattgcagatatccttcggcgctttaaggtgttgcaa
gaaaagaaaattccagcatggacagaagtcgttcttgttccaatgacaggaaaaccaagt
ctatatccaggattattcatctttactaccccttgcaggatggtacggcctgtgagaaac
ttggccttgggaaaggaagaattgattggtactctggaacaggtcttcatgaacattgct
gtccttgaggatgagattatgcctggagtaactacccatcaagagctctttcctcacagc
atgctgagtgtagttgccaacttcattcctttctcagatcataaccagagtccaagaaac
atgtatcaatgtcagatggggaagcaaactatgggatttccacttcttacttatcgggac
cgctcggataataagctgtaccgacttcaaacccctcaaagccctttggtacggccgtac
atgtatgattactatgacatggacagctatccagttggtaccaatgcagtcgttgctgtt
atttcctacacaggctatgacatggaagatgcaatgattgtgagtaaggcttcatgggag
agaggatttgcacatggaagtgtttacaagacagagagcatagacctcgctgaaaaaatc
aaacagggagatgacactctggtgtttggaatcaaggccgataatccaaaggttatgcag
aagttggatgcagatgggctgccatacattggatccattctgcagtacggggatccttac
tacagctaccttaacctcaacacaggagagagcttcatcgtttattataagagtaaggaa
agctgcattgtggataacatcaaagtgtgcagcaatgacagcggaagtggaaaatttaaa
actatttgtatcactgtgagaatccctcgtaatccgactatcggagacaaatttgccagc
cgacatgggcagaaaggtattttgagcagactctggcctgttgaggatatgccatttaca
gagagtggaatggttcctgatattctcttcaatcctcatggctttccatcccgaatgacc
attggaatgttaattgagagcatggctgggaagtctgcagcgctgcatggcctttgtcat
gatgccacacccttcacgttttcagagaaaaattctgccttggaatattttggcaggatg
ttaaaggctgctggctacaactactatggcacagagaggatgtatagtgggatcagtggg
gtggagctagaggcagacattttcattggagtcgtatactatcaacgcctgcgccacatg
gtttctgacaagttccaagtgaggacaacaggagccagagataaagtcaccaaccagccc
ataggtgggagaaacgttcagggtgggattcgttttggagagatggaacgtgatgctctg
ttggctcatggcacgtccttcttgttgcatgaccgtctgttcaactgctctgatcgttca
gtagctcatgtctgtgtgaagtgtgggagcttgctttcacctttgttggagaagcctccc
ccatcctggtctgccacacgcaataggaaatactgctgtactgtttgcaaccagagtgac
acaattgacacagtatcagtgccttatgtcttccgatattttgtggccgagttggcagcc
atgaatataaaagtgaaacttgatgtgaaataa
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integrated database retrieval system
