Gavialis gangeticus (Gharial): 109304774
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Entry
109304774 CDS
T07453
Symbol
ZC3H12D
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109304774 (ZC3H12D)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
109304774 (ZC3H12D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
109304774
NCBI-ProteinID:
XP_019383137
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MSLSGKPVTARHRRGPAAEMDVHQGKLEFFCKLGYVKQDIFKVLENLGQEALEDDVLKEL
IRMGSRPQAHGSQAQHPLPKLVARGSCSTLAVPKWPEEDTANSSSNLRPIVIDGSNVAMS
HGNKEVFSCWGIQLAVDWFRERGHKYIKVFVPTWRKEPPRFDSPITDQHILEELEKQSIL
VYTPSRKVKGKRVVCYDDRYIVKVAYAKDGVIVSNDNYRDLQNENPEWKWFIEQRLLMYS
FVSDKFMPPDDPLGRHGPTLTNFLSKKPALPEPKWQPCPYGKKCTYGSKCKFYHPERQYH
AQLSVADELRAKTKASLLSVGAEEELKTTPPTGRGENAPHDTCPKRQQESSGVRGNSSVQ
SFTVDPHCVEWTQRSYLEDSGRAWADRSQNKLEPEQRSFLQDPLRDQRLMEKQLSMLSLG
DHIYSESGPAGMVQAEDRVDSPHQCWDHRHSSYFTAHHHSVECTCLQGCRFHPSSHLGRY
PAHGRAQPCCNMQTQAVQDQRILYVPDSSQARRGLYSSLAPLSDPFPYSKPEDAWYQKYL
LSQPPVQPFPLESGKRSGSFPRVDGCPHGEFLQSHAPGPLAGERACIHTVLCSMFPYNDV
DRVMSLYPDLEDVSSLILLIQRYRNL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgtctggcaaaccagtaacagcacgccacaggagaggtcctgctgcagagatg
gacgtacaccagggcaagctggagtttttctgtaagctgggctatgtcaagcaggacatc
ttcaaagtgctggagaatctgggccaagaggccctagaagatgatgtgctgaaagaactg
atccgaatggggagcagacctcaggcccatggcagtcaggctcagcacccactgccaaaa
cttgttgcccgtggatcatgtagcactctggcagtgcccaaatggcctgaagaggacaca
gccaactcttccagtaacttgagacccattgtgattgatggcagcaatgttgctatgagc
catgggaacaaagaagtgttctcgtgctggggaattcagctggcggtggactggttcaga
gaaagaggtcataaatatatcaaggtcttcgtcccaacctggagaaaggaaccaccgcga
tttgatagccctattacagatcagcacattctcgaagaacttgaaaagcaatcaatcctt
gtgtacaccccatcccgcaaagtgaaagggaagagggtggtctgctatgatgatcgctac
atagttaaagtggcctatgccaaagatggggtcattgtttccaatgacaactatcgggat
ctccagaatgagaatcccgagtggaagtggttcattgagcagcgactcctcatgtactcc
ttcgtcagtgacaaatttatgcctcctgatgacccccttggccgccatggacccactctc
actaatttcctcagcaaaaagccagcccttcctgaaccaaaatggcagccctgtccatat
gggaaaaaatgcacatatggcagcaagtgcaaattttaccacccagaaaggcagtatcat
gctcagctgtctgttgctgatgagctccgagccaaaacaaaggcttccttactaagcgtg
ggggcagaggaagagttgaagaccacccctcctacaggcagaggagagaatgcaccccat
gacacttgccccaagaggcagcaggaatccagtggcgtgaggggaaacagctctgtgcag
agttttacagtcgatccccactgtgtggagtggacccaaaggagctacttggaggattca
gggagggcctgggcagacaggtcccaaaacaagctggaacctgaacagaggtcatttctg
caagacccattgagagatcaaaggctcatggaaaagcagctctccatgttatcacttggt
gaccacatatacagtgaaagtgggccagcaggcatggtgcaagcagaggacagggtggac
agtcctcatcagtgctgggatcatagacacagttcatacttcactgcccaccaccacagc
gtggaatgcacgtgcttacagggctgtcgtttccacccaagttctcatctgggtaggtac
ccagctcatggcagggctcagccctgctgcaatatgcagacacaagcagtccaggatcag
cgaatcctttatgtccctgacagctctcaggccagacgaggcctgtattcttccttggct
cccctgagcgacccctttccatacagcaagcctgaagatgcatggtaccaaaagtattta
ttgagccagcctccagttcagccttttccgttagagtctggtaagcggtctggctccttt
cccagggtggatggctgtccacatggtgaattcctgcagagccatgctccgggtcctctg
gctggtgagcgggcatgcatccatacagtgctctgctccatgttcccctataacgatgtg
gatcgagttatgtccttgtaccctgatcttgaagatgtgtctagcttaatattattaatt
caaagatacaggaatttatga
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