Gavialis gangeticus (Gharial): 109304913
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Entry
109304913 CDS
T07453
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggn03036
]
109304913 (CHD7)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109304913 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
109304913
NCBI-ProteinID:
XP_019383259
LinkDB
All DBs
Position
Unknown
AA seq
3021 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENTVNPMGQQIPMDQGFPSLQSSLHHPPTN
QNQAKLTHFDHYNQYEQQKMHLMDQPNRMMSNAPGNGIASPHSQYHNPPVPQVPHGSGTG
GQMGVYPSMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQQQQQQQPTQPPQTPS
GPPGQGHPQHMQQMGNYMARGDFSMQQHGQPQQQRMNQFSQGQEGLNQGNPFIATSGPGH
LSHVPQQNPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSS
RSQTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFP
SNSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVR
PGSAGIPMEVGSYPNIPHPQPSHQPPGAMGIGQRNMGPRNMQQSRPFMGMSSTPREMGGH
MRPNGCPGVGLADPQAIQERLISGQQHPSQQQSFQQQMPTCLPMQPHPGIHHQSSPPPPH
PHHQPWAQLHQSPQNTPQKVPVLQHSPSEPFLEKPVPDMTQVSGPNTQLVKSDDYLPSIE
QQPQQKKKKKKNNHIVAEGPSKGFGKEDFPSGLDSQDLTRNSADCSQEEKKKKKKPKAKK
EPKDPKEPKEKKEPKEPKTPKTPKTPKEPKEKKAKNATPKPKTSKKTSNKKSDSETSAVK
KKGNKGKEGSENSDLEKTPPASPHEDDDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEAD
DVDAAGRDSPSNTSQSEQQESADAEGPVVEKIMSSRSVKKKMENGEEVELEEFYVKYKNF
SYLHCQWASVEDLDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEVDRIMDISHS
TDDNGEPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMERVERPPADDW
KKSESSREYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLK
GIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKG
SYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLT
GTPLQNTVEELFSLLHFLEPARFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKED
VEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCN
HPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFS
QMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGI
NLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLG
LDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLR
RTHTITIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVI
DTPRVRKQTRLYSAVKEDELMEFSDLESDSEEKPSTKPRRPQDKSQGYARSECFRVEKNL
LVYGWGRWTDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTAD
GQTRALVNHSGLSAPVPRGRKGKKVKAQSSQPVLQDADWLASCNPDILFQEDSYKKHLKH
HCNKVLLRVRMLYYLRQEVIGDQADKILEGADSSEVDIWIPEPFHAEVPTDWWDKEADKS
LLIGVFKHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDE
DPEYKPTRTPFKDEIDEFANSPPEDKEESIEIHRTSKHNESNAELGQLYWPNTSTLTTRL
RRLITAYQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEAD
FYRVVSTFGIIFDPIKHQFDWNQFRAFARLDKKSDESLEKYFSSFVNMCRRVCRMPVKPD
DEPPDLSTMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWEC
GKHDKDLLIGAAKHGVSRTDYHILNDPELSFLEAHKNFAQNRGAGNASTVSSLNPLGAGC
SQIPSVIPSTPVQDEKTTEQTESKVETSENPAAKEKSDIKEETDTAEKDTKQECDAEAEP
GPVKCELKDIEMSTDVDPKSISEKGSEEDEEEKLDDDDKSEESSQPEAGAVSQGKNFDEE
SNASMSTARDETRDGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGK
WPVNRRQMFDFQGLIPGYTPTAVDSPLQKRSFAELSMVGQASISGSEDITASPQLSKEDA
LNLSVPRQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASHEA
TSSTSNFSSVTSKFILPNVSTPVSDAFKTQMEMLQAGLSRTPTRHLLNGSLMDGEPPMKR
RRGRRKNVEGLDLLFMSNKRTSLTVEDAEVTKAFDEDMETPSVRNIPSPGQLDPDTRIPV
INLEDGTRLVGEDAPKNKDLVEWLKLHPTYTVDMPSYVPKSADVLFSPFQKPKQKRHRCR
NPNKLDINTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQ
SGFVPESMFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFA
GMDLTSLQNLQNLQSLQLAGLMGFPPGLATAAAAGGDSKNPAAMLPLMLPGMAGLPNMFG
LGGLLNNPITATTGNATTASSQGETEDGTSKVEEKKSENEEENKDSEKSTDTVSATDSAN
GSVSAATAVTTTAATATTTTATTNTGLPANPLAFNPFLLSTMAPGLFYPSMFLPPGLGGL
TLPGFPALAGLQNAVGSNEEKATDKTEGAAFKDEENLEGSDAEESLDKTADSSVLEDEIA
QGEELDSLDGGEEIENNENDE
NT seq
9066 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcccggaatgatgagtctgtttggagaagatggaaatatctttagtgaaggg
ctggaaggtcttggagaatgtggatatcctgaaaatacagtaaatcccatgggtcagcaa
atacccatggatcaaggatttccttctttacagtcatctcttcaccatcctcctacaaat
caaaatcaagcaaagttaacccactttgatcactataatcaatacgaacagcaaaaaatg
catctgatggatcagcctaacagaatgatgagtaatgcccctgggaatggtatagcatct
cctcattcacagtaccacaaccctccagttcctcaggttcctcatggcagtggcactggt
ggtcagatgggagtctatcctagcatgcagaatgaaagacatgggcaaccgtttgtagac
agtggttccatgtggggaccacgggcagttcaggtgccagaccagataagagcaccatac
cagcagcagcagcagcagcagcagcagcaacaacctacacagccaccacaaacaccttcg
ggaccccctggacaaggccaccctcagcacatgcagcaaatgggaaactacatggctcgt
ggtgatttttcaatgcaacagcatggtcagccacagcagcagaggatgaaccagttctct
caaggccaagaaggccttaatcagggaaatccttttattgccacctcaggacctggccac
ttgtctcatgtgccccagcaaaatcccagcatggcaccttctttacgacactcagtccag
caatttcaccaccatccccccactgctctccatggagaatcagtagcccacagtcccaga
ttctcccctaatcccccccagcagggtgctgttaggccgcaaacacttaattttagttct
cggagccagacggtaccctcacctactataaacaactcagggcagtattctcgctatcct
tacagtaacctaaatcagggattagttaataatacagggatgaatcagaatttaggcctt
acaaataacactccaatgaatcaatctgtaccaagatacccaaatgctgtaggatttcca
tcaaacagtggtcaaggactaatgcaccagcagcccattcaccctagtggctcacttaac
caaatgaacacacaaactatgcacccttcacagcctcagggaacttatgcctctccacct
cccatgtcacctatgaaagcaatgagtaatccagcaggtacccctcctccacaggttagg
cctggtagtgctggaataccaatggaagttggcagttatccaaatataccccatcctcaa
ccgtcacaccagccccctggtgccatgggaattggacagaggaatatgggcccccgaaac
atgcagcagagtcgtccatttatgggtatgtcttcaacaccacgggagatgggtgggcac
atgagaccaaatggttgtccaggtgttggccttgcagatccacaagcaatacaagaacga
ctgatatctggccagcagcatcctagtcagcagcagtctttccaacagcaaatgccaacc
tgtcttcccatgcagcctcatccagggatacatcatcagtcttcaccgccaccaccacat
ccacatcatcagccttgggcacagcttcatcagtcaccacaaaacacaccacagaaagtg
cctgtccttcagcattctccatcggaaccctttttagagaaaccagtgccggatatgact
caggttagtggaccgaatacccagctagtgaaaagcgatgattatctgccatcaattgag
cagcagccacagcaaaagaagaagaaaaagaaaaataatcacattgttgcagagggtccc
agtaaaggttttggtaaggaagattttcctagtgggcttgacagccaggatctaaccagg
aactcagcggattgctcacaggaagaaaaaaagaaaaagaagaagcccaaggcaaaaaaa
gagccgaaggatcctaaggaacccaaggaaaagaaggagccgaaggaacccaagaccccc
aaaacccctaagacccccaaagagccaaaggaaaagaaagcaaaaaatgccacaccaaaa
cccaagaccagcaaaaagacaagtaacaagaaatctgactcagaaactagtgctgtgaag
aaaaagggcaacaagggaaaggaaggttctgaaaactccgatttggaaaaaacaccacca
gcatctcctcatgaagatgatgatgatccaggtgttcagaagaggcgctccagccggcag
gttaagagaaagcgttacacagaagacctggagtttaagatttcagatgaggaagcggat
gatgtggatgctgctggaagagactccccttccaatacttctcagtcagagcagcaggaa
tctgctgatgctgaaggtcctgtagtagagaaaattatgagtagccgctcagtaaagaaa
aagatggagaacggagaggaggtagagctagaggaattttatgtaaagtacaaaaacttc
tcttatcttcattgtcagtgggcatctgtggaagacctagacaaagacaagagaattcag
caaaagattaagcggtttaaggcaaagcagggccagaataagttcctttcagagattgat
gacgagctttttaatccagattatgtggaagttgatcgaatcatggacatttcacatagc
acagatgataatggagagcctgtgactcattatctggtgaagtggtgttcacttccttat
gaagacagcacttgggagctaaagcaagacatagaccaggctaagatcgaagaatttgag
aaactgatgtctagggagccagaaatggagcgtgtggagcgacctcctgctgatgactgg
aagaaatcggagagttccagggagtataaaaacaataacaaactcagggaataccagttg
gagggagtaaactggcttcttttcaattggtacaacacacgaaactgcattttagcagat
gaaatggggttgggaaaaactatccaatccattacatttctctatgagatatatttgaaa
ggaatccatggtcctttcttggttattgcaccattgtcaacaattcccaactgggaaagg
gagttccgcacctggacagagttgaatgtggttgtgtatcatgggagtcaagccagccgg
cggaccattcagttgtatgaaatgtacttcaaagatccacagggtcgtgtgataaagggg
tcctacaagtttcatgccatcatcactacatttgaaatgattttgactgactgccccgag
ctgcgaaacattccgtggcgttgtgtggtaattgatgaagctcacagactaaagaacaga
aattgcaagctcttggaaggactcaagatgatggacctggaacacaaggtgctgcttact
ggtaccccattacagaacactgtagaagagctgtttagcttacttcatttcttggaacca
gctcgcttcccttcagaaacgacattcatgcaagagtttggtgatctaaaaactgaagaa
caggtgcaaaaactccaagcaattttgaagccaatgatgttaagacgtctcaaggaggat
gtagaaaagaacctggctccaaaagaagaaaccatcattgaagttgagctgacaaatatt
cagaagaaatactatcgtgctattcttgaaaagaatttcacgtttctttccaagggtggt
ggccaagctaatgtacctaatcttctgaacactatgatggaacttagaaaatgctgcaat
catccatatcttattaatggtgctgaagagaaaattttggaagagtttaaagaaacacac
aatgccgactctccagattttcagctccaggcaatgatccaggctgctggcaagctagta
ctgattgacaagctgctgccaaaactgaaggctggtggccacagggtgcttatcttttcc
cagatggtgcgctgcttggacatactggaagactacctcattcaaagacggtacccatat
gagcgaattgatggccgagtaagaggcaatcttcgccaggcagctattgacaggttttct
agacctgattctgataggtttgttttcctgctgtgtacaagggcaggaggtttgggcatt
aatcttactgctgctgatacctgcatcatctttgattcagactggaacccacagaatgac
ctccaggcccaagcccgatgtcacagaataggacagagcaaatcagtgaaaatctacagg
ttgataacaagaaactcttatgaaagagaaatgtttgacaaagctagcttaaaacttggc
cttgataaagctgtactccagtctatgagtggaagagaaaatgctacaaatggggtacag
caactttctaaaaaagagatagaagatctcctgagaaagggggcttatggtgctcttatg
gatgaggaggatgaaggttccaagttctgtgaagaagacattgaccagattctcttaagg
cgaacacacacaattactatcgagtctgaaggaaaaggctcaacttttgcaaaggctagt
tttgttgcatctggaaacagaacagacatttccttggatgaccctaatttttggcagaag
tgggctaagaaagctgagctggatattgacgctttaaatggaaggaacaatctagttatt
gatacaccaagagtaagaaagcaaaccaggctttacagtgcagtgaaggaggatgaactg
atggagttctcagacctggaaagtgattcagaagaaaagcccagtacaaagccccgaaga
cctcaggacaaatcacagggttatgcacggagcgaatgttttagggtagagaaaaacctt
ttggtttatggttggggtcggtggactgacatcctctcacatgggcgctataaacgtcag
ctcacagaacaagatgtggaaaccatctgccggactatcttggtatattgtcttaatcac
tacaaaggggatgaaaatatcaaaagtttcatctgggatctgatcactccaactgcagat
gggcaaacacgagccttggttaaccattctggtctatctgcaccagtgcccagaggaagg
aaaggcaagaaagtaaaagcccagagttcgcagccagtgctgcaagatgcagattggctg
gcaagctgtaacccagatatcttgtttcaagaggacagctataagaagcatctcaaacat
cactgtaataaggtcctgctgcgtgtccgcatgctgtactatctaagacaagaagttata
ggggaccaagcagacaagatcttagagggtgctgactcaagtgaggtagatatatggata
cctgagccattccacgctgaagttcctacagactggtgggataaggaagctgataaatcc
cttttaattggagtgttcaaacatggctatgagaaatacaattctatgagagctgaccct
gcactgtgctttctggaacgggttggtatgcctgatgccaaggccatagctgctgaacag
agagggacagacatgttagcagatggtggtgatggaggagaatttgacagagaggatgaa
gatccagaatataaaccaaccagaactcctttcaaggatgaaattgatgaatttgcaaac
tctcctccagaggataaagaagaatctatagagatccacaggacaagcaagcacaatgaa
agcaatgccgagttaggccagctctactggcccaatacttcaaccctgactacccgtctg
cgtcgcctcattactgcctatcagcgcagttataaaaggcaacaaatgaggcaagaggca
ctaatgaagactgaccgacggagacgtcggcctcgagaggaagtgcgagcactagaagca
gaaagagaagctataataagtgaaaaacgtcaaaagtggacaagaagagaagaagcagat
ttttaccgtgtagtgtctacttttgggattatctttgaccccataaaacatcagtttgac
tggaatcagttcagagcctttgccaggcttgataagaagtctgatgaaagtctggagaaa
tacttcagtagttttgtgaatatgtgcaggcgggtatgccgaatgccagtcaagccagat
gatgaaccacctgatctttccaccatgattgagccaattacagaggagcgtgcttctaga
actttatatcgcatagaactgttacggaaaatccgcgagcaggttcttcatcaccctcaa
ttaggagagaggctaaaactctgccagccaagcttggatctgccagagtggtgggagtgt
ggtaaacatgacaaagacttactgattggtgctgctaaacatggagtcagtaggacagat
tatcacatcctgaatgaccctgagctctctttccttgaggcccataaaaactttgctcaa
aatagaggggcaggaaatgcaagtactgtgtcttctctaaacccactgggtgctggctgc
agtcaaataccatctgttattccatccacaccagtacaagatgaaaagactacagaacaa
acagagtctaaagttgagacatctgaaaatccagcagccaaagaaaagtctgatattaaa
gaggagactgacactgcagaaaaggacactaagcaggaatgtgatgctgaggctgagcct
ggtcctgttaaatgtgaattgaaagatatagaaatgagtacagatgtagatccaaaatct
atttctgaaaaaggttcagaagaggacgaagaggaaaaacttgatgatgatgataaatca
gaagagtcctcccaacctgaagcaggagcagtttctcagggtaagaattttgatgaagaa
agcaatgcatctatgagcactgcaagggatgaaacccgtgatggattttatatggaggat
ggagacccttcagtggctcagctgcttcatgaaagaacatttgccttttctttttggcct
aaggaccgagtaatgatcaaccgattagacaacatctgtgaagcagtgctgaaagggaag
tggccagtaaatagacgccagatgtttgatttccaggggctcatacctgggtatactcca
acagctgtggacagccctctgcagaaaaggagctttgcagaactctccatggttggtcaa
gctagcatcagtggcagtgaagatatcactgcttctcctcagttatcaaaggaagatgca
ctcaatttatcagttccacgtcagcggagaaggaggcggagaaagattgaaatcgaggct
gaaagagctgccaagaggagaaatcttatggaaatggttgcccagttacgagagtctcag
gtggtctcagaaaatggacaagaaaaagttgtagatttatcaaaggcctcacatgaggca
acaagttctacctcaaatttttcatctgttacttcaaagtttatcttgcctaatgtctcc
acacctgtatctgatgcctttaaaactcaaatggagatgctgcaagcaggtctttcacgc
acacctacaaggcatctgctaaatggctctttaatggatggagaaccacccatgaagagg
aggagaggaaggaggaaaaatgtggaaggactcgatctgttgtttatgagcaacaaacgg
acatcactgactgtagaggatgcagaagtgaccaaagcatttgatgaagatatggagacc
ccatcagtaaggaacattccatctcctggacaactggatccagacactcgcatccctgta
attaacttggaggatgggaccaggctggttggggaagatgcccctaagaacaaggattta
gtcgaatggcttaaattgcatcctacttacactgttgatatgccaagttatgtaccaaag
agtgcagatgtgctgttttccccatttcagaagccgaagcaaaaacgacacagatgtcga
aaccctaataaactggatataaacaccttgacaggagaagaaagggtacccgttgtaaat
aaacgaaatggaaagaagatgggtggagccatggcccccccaatgaaagacctgccaagg
tggctggaagaaaatcctgaatttgctgttgctccagattggactgatattgttaagcag
tctggttttgttccagagtccatgtttgaccgtcttctcacaggaccagttgtgagagag
gaaggagcaagcagaagaggaagaaggccaaaaagtgaaattgccaaagcagctgcagca
gctgccgctgtagcttcaacttcgggaatcaacccactgctaatgaacagtttgtttgct
ggaatggacctcacaagccttcagaatctacagaacctacagtctctccagcttgcaggt
ctcatgggcttccctccaggactagcaacagctgctgctgctgggggcgattctaaaaac
ccggctgccatgctgcctctgatgctaccagggatggcaggattgcccaatatgtttgga
ctaggtggattgttgaataacccaataacagctactactggaaatgccactactgcttcc
agtcaaggagaaactgaagatggcacttcaaaggtagaagagaagaaaagcgagaatgaa
gaggagaataaagactctgagaaaagcacagacactgtttctgctactgactctgcaaat
ggatctgtcagtgctgctactgctgtgactaccactgctgccactgccacaaccaccacc
gccaccaccaacactggattgccagcaaaccctctggccttcaatcctttcctgctgtcc
accatggctcctggcctgttctatccatctatgtttctacctccaggactgggaggattg
acactgcctggtttcccagcattagcaggacttcagaatgcagtgggctccaatgaagag
aaggctactgacaaaactgaaggagctgcctttaaagatgaagagaatctagaaggcagt
gatgcagaggagagccttgataaaactgcagattcctccgttttagaagatgaaatagca
cagggtgaagaattagactcacttgatgggggggaagaaatagaaaacaatgaaaatgat
gaataa
DBGET
integrated database retrieval system
