Gavialis gangeticus (Gharial): 109304959
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Entry
109304959 CDS
T07453
Symbol
STAU2
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ggn01009
]
109304959 (STAU2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggn03019
]
109304959 (STAU2)
Protein phosphatases and associated proteins [BR:
ggn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109304959 (STAU2)
Messenger RNA biogenesis [BR:
ggn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
109304959 (STAU2)
mRNA cycle factors
Stress granule specific factors
109304959 (STAU2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Staufen_C
Motif
Other DBs
NCBI-GeneID:
109304959
NCBI-ProteinID:
XP_019383351
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MAQVKMQTPANLPGPPLSPMVLPPSVTTTNSLGLQSSMNGSISESAAGCNSPTAGLIDSA
PSSNSPAPLQDNMANPKEKTPMCLVNELARFNRIQPLYKLLNERGPAHAKMFTVQLTLGE
QTWEAEGSSIKKAQHAAASKALNETTLPKPTPRPPKNNVNNNPGSITPTVELNGLAMKRG
EPAIYRPLDPKPLPNYRANYNFRGMYNQRYHCPLPKIFYVQLTVGNSEFFGEGKTRQAAR
HNAAMKALQALQNEPIPEKLPQNGEGGKETEEDKDANKSEISVVFEIALKRNIPVSFEVI
KESGPPHMKSFVTRVTVGEFSAEGEGNSKKLSKKRAAMAVLQELKKLPPLPVIEKPKLYF
KKRPKTILKTGPEYGQGMNPISRLAQIQQAKKEKEPEYILLSERGMPRRREFVMQVKVGN
EVTTGTGPNKKIAKRNAAEAMLLQLGYKASTPLQDQPEKPGENKGWNGQTAGYPEPTSNT
PKGILHLSPDVYQEMEASRNKAAPGTTVSYLPSKEMSQTSSSFFSIPTTNSTATIARELL
MNGTSPTAEAVALKGISPASPCPAVQPSKQLEYLARIQGFQVHVSDRQNGKEFMTCLTLS
PVQMTFHGIGSNIEASHDQAALSALKQFSEQGLNPVEGAMKVENGSLEKQVKHLGEKADN
KQTNSGTIAQDCKDSKAVV
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagttaaaatgcagaccccagcaaatcttcctggacctcccctgtcccctatg
gtgctacccccatcagtaacaactacaaattcactgggtcttcaatcatcaatgaatgga
tccatttcagaatcagctgctggctgtaacagtcctacagctggccttatagattctgcg
ccttctagcaactcaccagctcctctccaagataacatggcaaaccccaaagagaaaact
ccaatgtgtctggtaaatgagttagcccgtttcaatagaattcaacctctgtataagctt
ctgaatgaaagagggcctgctcatgccaagatgttcacagtacagctgactcttggcgag
cagacatgggaagctgaaggaagcagtattaaaaaggctcaacatgctgctgctagcaaa
gctttgaatgaaacaacccttcccaaaccaactcctagaccaccgaaaaataatgttaac
aataaccctggcagtataactccaactgtggagctaaacggtttggctatgaaaagggga
gagcctgccatctataggccactagatccaaagccactcccaaactatagagcaaattat
aacttccggggcatgtacaatcagaggtatcactgcccactgcctaaaattttctatgtc
cagttgactgttggcaacagtgagttttttggtgaaggaaagactcgtcaagctgctaga
cacaatgctgcaatgaaggcccttcaagctctccagaatgaacctatcccagaaaaatta
cctcagaatggagagggaggaaaagaaacagaagaagataaagacgcaaacaaatctgag
atcagtgtagtgtttgaaattgctttgaagcgcaacatacctgtcagttttgaggtgatt
aaggaaagtggacctccacatatgaagagctttgttactcgagtcacagtaggagaattc
tctgcagaaggagaaggaaacagtaagaaactctcaaaaaaacgagctgcaatggctgtc
ctacaagaacttaaaaaactccctcctcttcctgtgattgaaaagccaaaactttacttt
aaaaaacgtcctaaaacaatattaaagactggaccagaatatggtcaaggaatgaacccc
attagccgcctggctcagatccaacaggccaaaaaagagaaggagccagagtatattctt
ctttcagagagagggatgcctcgtcgccgagagtttgttatgcaggtcaaagtaggcaat
gaagttactactggaacaggccccaacaagaaaatagctaaaagaaatgcagcagaagca
atgttgctacagcttggttataaagcctccacccctcttcaagatcagccagaaaagcca
ggggaaaataagggatggaacggtcaaactgctgggtatcctgaaccaacgagtaacaca
ccaaagggaattctccatctctcgcctgatgtttatcaagagatggaagcaagccgcaac
aaagcagcccctggtaccactgtaagctatttgccatccaaagaaatgagccagacttct
agctctttcttcagcatacctaccactaatagcacagctacaattgccagggaacttctc
atgaatggaacatccccgactgccgaagccgtagctctaaaaggaatatctcctgcttcc
ccctgtcctgcagtgcagccttcaaaacagctggagtatttggcaaggattcaaggcttt
caggtacacgtcagtgatagacaaaatggcaaagagtttatgacctgtttgacactgtct
cctgtgcagatgactttccatggtatcggaagcaacattgaagccagccatgaccaggca
gctttaagtgccttgaaacagttttcagaacaaggactgaatccagtagaaggggctatg
aaggttgaaaatggttcacttgaaaaacaagtcaagcatctgggagaaaaagcagacaat
aaacagactaactcaggcaccattgctcaggactgcaaggattcaaaggctgtcgtctag
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