Gavialis gangeticus (Gharial): 109305029
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Entry
109305029 CDS
T07453
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04140
Autophagy - animal
ggn04148
Efferocytosis
ggn05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109305029 (VPS16)
04148 Efferocytosis
109305029 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109305029 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ggn04131
]
109305029 (VPS16)
Membrane trafficking [BR:
ggn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109305029 (VPS16)
Hops complex
109305029 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_C
Vps16_N
Motif
Other DBs
NCBI-GeneID:
109305029
NCBI-ProteinID:
XP_019383489
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
WGPAKRRAVPRVAQNAAVSLQKESQKADEYLREIKDKEQLSEAVQQCIEAAGYEHEPETQ
KSLLRAASFGKCFLDRFSPESFVRMCQDLRVLNAIRDYQIGIPLTFAQYKQLTIEVLLDR
LVLRRLYPLAIKICEYLRLSEIQGVSRILAHWACYKVQQKDKSDEEVAQAINQKLGDTPG
ISYSEIAGRAYECGRTELAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVYT
VVLHLKNELNRGNFFMTLQNQPVALSLYRQFCKHQERETLKDLYNQDDNHQELGNLHVHN
SYANEERIEGRVAALQNAVDEYYKAKNEFAAKATEDQIKLLRIQHRLQEDLDKPYLDCSL
HDTISHLILDGKHKRAEQLYREFKIPDKRFWWLKISSLAECGDWEEMEKFSKSKKSPIGY
LPFVEICVKYHNRHEAKKYAARVTPEQRVKAFILVGDLDQAADAAIEHKSESEMSLVLAK
CFPAIDATVVEKLNRARAQLLKK
NT seq
1514 nt
NT seq
+upstream
nt +downstream
nt
cctgggggcccgcaaagcgacgtgcagttcccagggtggctcagaacgctgctgtctctc
tgcagaaggagagccagaaggcagatgagtacctgcgggagatcaaggacaaggagcagc
tctcggaggctgtacagcaatgcatcgaggctgcaggctacgagcacgagcccgagaccc
agaagtccctgctcagggcagcctccttcggcaagtgcttccttgaccggttctcccctg
agagctttgtgcgcatgtgccaggacctgcgggtgctcaatgccatccgggactaccaga
tcggcatccccctcacctttgcccagtacaagcagctcaccatcgaagtgctgctggaca
ggctggtcctccggaggctctaccctctggccatcaagatctgcgagtacctgcgccttt
ccgagatccagggcgtcagcaggattcttgcccactgggcctgctacaaggtgcagcaga
aggacaagtcggacgaggaggtggcccaggccatcaaccagaagctgggagacacccccg
gcatctcatactcggagatcgctggtcgtgcctacgagtgcggccgcaccgagctggcca
tcaagctcctggagtatgagccccggtcaggggagcaggttccgctgctgctgaagatga
agcggagcaagctggcactgagcaaagccatcgagagcggggacacagacctggtgtaca
cggtcgtgctgcacctgaagaatgaactgaaccgtggcaacttcttcatgacgctgcaga
accagccagtggccctgagcctctaccgccagttctgcaagcaccaggagagggagacac
tcaaggacctgtacaaccaggacgacaaccaccaggagctcggcaatctccacgtccaca
acagctacgccaacgaggagcggatcgaggggcgggtggcagcactgcagaacgcagtgg
atgagtactacaaggccaagaatgagtttgccgccaaagccacagaggatcagatcaagc
tgctgcggatccagcaccggctacaggaggacttggacaagccctacctggactgctccc
tacacgacaccatctctcacctcatcctggatggcaaacacaagcgggctgagcagctgt
accgggagttcaagatccctgacaagaggttctggtggctgaagataagcagcttggccg
agtgcggcgactgggaggagatggagaagttctccaagagcaagaagtcgcccatcgggt
acctgcccttcgtggagatctgtgtgaagtaccacaaccgccatgaggcgaagaagtacg
cggcccgtgtcacacctgagcagagggtcaaggccttcatcctggtgggagacctggacc
aagctgccgacgccgccattgagcacaagagtgagagcgaaatgagcctggtgctggcca
agtgcttccctgccattgacgccaccgttgtggagaagctcaatcgcgcccgggcccaac
tcctcaagaaatag
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integrated database retrieval system
