Gavialis gangeticus (Gharial): 109305162
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Entry
109305162 CDS
T07453
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ggn00535
]
109305162 (COL14A1)
Proteoglycans [BR:
ggn00535
]
Extracellular matrix (ECM) proteoglycans
Others
109305162 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
vWA_SIBA-E
VWA_3
DUF4959
DJ-1_PfpI
Motif
Other DBs
NCBI-GeneID:
109305162
NCBI-ProteinID:
XP_019383653
LinkDB
All DBs
Position
Unknown
AA seq
1889 aa
AA seq
DB search
MKRMVCQQKRESWVLLAFLTVAAHFISCAQSQVAPPTRLRYNVVTPDSVQISWKAPKGQF
IGYKLLVTPTSGGKTNQLTLQNSATKAIIQGLIPDQTYSLQIIAYSKDQESKPAQGQFRI
KDIEKKKETSSKSKVKDKEHINGSKPSPAESQFTCKTPAIADIVILVDGSWSIGRFNFRL
VRLFLENLVAAFNVGSEKTRIGLAQYSGDPRIEWHLNTYRTKEAVLDAVRNLPYKGGNTL
TGLALTYILENSFKPEAGARPGVSKIGILITDGKSQDDVIPPAKNLRDAGIELFAIGVKN
ADVNELKEIASEPDSTHVYNVADFNFMHTIVEGLTRTVCSRVEEQEKEIKALGTSVTTLG
APTELVTSELTARGFRVSWTHAPGKVEKYRVVYYPTRGGQPEEVVVDGNVSTAVLKNLMS
LTEYQIAVFAIYSNAASEGLRGTETTLALPMASDLQLYDVSHSSIKAKWNGVAGATGYMI
LYAPLTEGLAADEKEIKLGEALTDIELDGLLPNTEYTVTVYAMFGEEASDPLTGQETTLP
LSPPRNLRFSDIGHSTARITWDPASKHVNGYRIMYVKTDGAETNEVEVDRVSTHTLQSLT
SLTEYTVAIFSLYDEGQSEPLTGSFTTKKVPTPRYLEVNEVTTDSFRVSWKPASSDVALY
RLAWIPLDGGESEEAVINGNQDTHVIEGLLPNTEYEVSLLAVFSDESESDVVAVLGTTLA
IATTVPTPITTASTTASKLTTAVFRSGIRNLVIDDETTSSLRVNWDISDYNVRQFRVTYL
AANSDRAEEVVMVPGRQNHILLQPLLSDTEYKVTVTPVYSDGEGVSVSTPGKTLTLSAPR
NLRVSDEWYNRLRISWDAPPSPTMGYRIVYKPINIPGPALETFVGDDINTILILNLFSGT
EYSVKVFASYSTGFSDALSGIAKTLPLSVTNLDAYQVRMTSLCAQWQLHRHATAYRIIIE
SLVDGKKREVTLGGGTPRHCFFELTPDTEYKISIYTHLHELEGPGVSMMETTLPLPTQPP
TSPSTTPAPPTIPPAKEVCKAAKADLVFLVDGSWSIGDDNFNKIISFLYSTVGALDRIGP
DGTQVAIAQFSDDPRTEFKLNAYKTKETLLEAIQQIAYKGGNTKTGKAIKHAREALFTLD
SGIRRGIPKVLVVITDGRSQDDVNKISRDMQLDGFSIFAIGVADADYSELVNIGSKPSER
HVFFVDDFDAFKKIEDELITFVCETASATCPLVYKDGSSFAGFKMMEMFGLVEKEFSTVE
GVSMEPGTFNAFPCYRLHKDALVSQPTKYLHPEGLPSDYTITFLFRVLPDTPQEPFALWE
ILNEEYEPLVGVILDNGGKTLTFFNYDYKGDFQTVTFEGPEIRKIFYGSFHKLHVVISKT
TAKIIIDCKLVSEKTINASGNITSDGVEVLGRMVRSRGPRDNSAPFQLQMFDIACTTSWA
NRDKCCEIPGLRDEENCPALPHACSCSEVSKGPLGPPGPPGGPGVRGPKGHRGDPGPKGP
DGPRGETGTPGPQGPPGPQGPSGLSIQGLPGPSGEKGEKGDLGPPGLQGVPGASGSPGRD
GTQGQRGLPGKDGPMGSQGPPGPVGIPGAPGVPGVTGNPGPQGDVGPPGVPGTKGERGER
GDVQSHAMVRAVARQVCEQLIQGHMARYNSILNQIPSHSLSTRTVPGPPGEPGRPGSPGP
PGEQGSPGRPGFPGNPGQPGRPGERGLPGERGEKGSTGLGTQGPRGPPGPAGPSGESRTG
SPGPPGSPGPRGPTGHTGSPGPQGSSGPPGYCDPSSCAGYGVGGGYSDPTDQDIPVVQLP
HNSYQIYDPEDLYDGEQQPYVVHGSYPVPAPYSQSYAEPHLAQPEFTPVREEMEAVELRS
PGISHFPRKISKRSMNFPARKRETGKKNS
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatggtttgtcaacagaagagagagagctgggtgctcttggcatttttaaca
gttgctgctcatttcatcagctgtgcccagagtcaagtggctccaccaacaagactaaga
tataatgtagttactcctgacagtgtacagatttcatggaaagcccctaaggggcaattt
atcggatataaacttcttgtcactccaacttcaggtggaaaaaccaatcaattaactctt
caaaatagtgctaccaaagcaattattcaaggtcttattccagatcaaacatactcactt
cagattattgcatacagtaaagaccaggagagcaagccagcccaaggccaatttcgaatt
aaagatatagagaaaaagaaggaaacatcaagtaaatccaaggtcaaggataaagaacac
ataaatgggagtaaaccatcaccagcagagagtcagtttacctgtaaaactccagcaatt
gcagacattgtgatccttgtcgatggttcgtggagtattggcagattcaatttcagactt
gttcggctgtttctggaaaacctggttgctgctttcaatgtgggttctgagaaaacaaga
ataggtcttgcgcaatacagtggtgacccccgaattgaatggcatctgaatacctatagg
acaaaggaggctgttttggatgcagtccgtaatctgccctataaaggaggcaatacatta
acaggtcttgccttaacttacattttggagaacagctttaagcctgaggcaggtgcaagg
ccaggggtgtccaaaattggtatattgatcacagatggaaagtctcaagatgatgttatt
ccacctgctaaaaatctacgtgatgctggtattgaactatttgctattggtgtgaagaat
gcagatgtaaatgaactaaaagagattgcctctgaacctgacagtactcatgtctacaac
gttgctgattttaacttcatgcataccattgtagaaggtcttacaagaactgtgtgttca
agagtggaggaacaggagaaggaaatcaaagcgctaggaacatctgttaccacacttgga
gctcctacagagttggtcacatctgagctaacagccagaggatttcgtgttagctggacc
catgcaccaggcaaagtggagaaatacagagttgtgtattatcccacaagaggaggacag
ccagaagaggtggtggtagatggaaatgtatcaacagcagttctgaaaaacctgatgtct
ttaacagagtatcagatagctgtgtttgctatatattcaaatgcagctagtgaaggactc
cgtggcacggaaactacacttgctttgccaatggcatctgatctacagctgtatgatgtg
tctcacagcagcataaaggcaaagtggaatggagttgcaggtgctacgggttacatgatc
ctatatgctcctcttacagaaggactggcagcagatgaaaaggagattaaactgggagag
gccttgacagatattgagctggatggattattgcctaacacagaatatacagtcacagtt
tatgccatgtttggagaagaagctagtgacccccttacagggcaggaaacaacattgccc
ttaagtccaccaaggaacttgagattttcagacattggacacagcactgcaagaataaca
tgggatcctgcttctaagcatgtaaatggttatcgtattatgtatgttaaaacagatgga
gcagaaaccaatgaggtggaagttgatcgcgtttcaacacacactctgcaaagtctgacg
tctcttacagaatatactgttgccattttctctctgtatgatgaaggacagtctgagcca
ctcactggcagctttactacaaaaaaagttccaacccctcggtacttggaagtaaatgaa
gtaacaacagatagtttccgagtcagctggaagcccgcctcctctgatgtagctctgtac
agattggcctggattccccttgatggaggtgaatctgaagaggccgtcataaatggaaac
caggacacacatgttattgagggtttgttacccaatacagagtatgaagtttctttgctg
gcagttttcagtgatgaaagtgaaagtgatgttgttgctgttcttggaacgacacttgca
attgctactacagtgcctactcccattaccactgccagtactacagcatccaagctcaca
acagcagtgtttcgaagtggaatcagaaaccttgttatagatgatgaaactacctccagc
ctgagggtgaattgggatatttctgactacaatgttcgtcaattccgagtgacttacctt
gctgccaatagtgatcgagcagaggaagtggtaatggtacctggaagacaaaaccatatt
cttcttcagcctttgctctcagatactgaatataaagttactgtcactcctgtctattct
gatggggaaggagtcagtgtctccactcctggcaagaccctgactctctctgcccccaga
aatttaagagtctcagatgaatggtacaaccgattacgcattagctgggatgcccctccc
tccccaacaatgggttacaggattgtctacaaacctatcaacatccctggaccagcattg
gagacctttgtaggagatgatatcaacaccattctgattttaaatctattcagtggaaca
gagtacagtgttaaagtatttgcttcatattcaacgggcttcagcgatgccctgtcaggc
atagccaaaaccttgcctttgagtgtgaccaatctggatgcttatcaggtccgcatgact
agtctttgtgcccagtggcagcttcacagacatgccacggcatacaggatcattatagag
tctcttgtggatgggaaaaagagagaagtaacccttggcggagggacccctcgacactgc
ttctttgagctcacacctgacacagagtataaaatcagcatctatacacatcttcatgag
ctagaggggcctggcgtaagcatgatggaaaccacattgccattgccaactcaaccacca
acttctccttcaacaacacctgccccacctacaattcctcctgcaaaagaagtgtgtaaa
gctgccaaagctgacctggtgttcttggtggatgggtcatggagcattggggatgataat
ttcaacaaaataatcagctttctgtatagcactgttggagccttggacaggattggtcct
gatggaactcaggttgcaatagcacagttcagtgatgatcccaggacggaatttaaactg
aatgcctacaaaacaaaagaaactcttcttgaggccattcagcagatagcatataaggga
ggaaataccaaaacaggcaaagcaattaagcatgcacgggaagctttgtttacccttgat
tcaggcataagaaggggcatcccaaaggttttggtggtcattactgatggacgatcacaa
gatgatgtgaacaaaatttccagagatatgcaactagatggcttcagcatttttgctatt
ggtgtggcagatgctgactattcagagttagttaatattggcagcaagcccagtgaaaga
catgtcttctttgtggatgattttgatgcctttaagaagattgaagatgagttgatcact
tttgtctgtgaaactgcatcagcaacttgcccgttggtgtataaggatggcagtagtttt
gcaggatttaaaatgatggaaatgtttggtttggttgaaaaggaattttcaacagtggaa
ggggtatccatggaacctggtacatttaatgctttcccgtgttacagactgcataaagat
gcattggtttcccagcctaccaaatacctgcatcctgaggggcttccttcagactatact
attacttttctattccgagtactccctgacacaccccaggaaccatttgctctttgggag
attttaaatgaagaatatgagccactggtgggagttattttagacaatggtggcaaaact
ctgacattctttaactatgactataaaggggattttcaaactgttacttttgaaggacca
gaaataaggaaaatattttatggaagtttccataagttgcatgttgttattagcaagaca
acagccaaaataattattgactgcaagctagtgagtgagaagacaattaatgcatcaggg
aatattacttctgatggggtagaagttctggggagaatggtcagatccagaggcccaaga
gacaattctgcaccattccagttacagatgtttgacattgcttgtactacctcatgggcc
aatagagacaaatgctgtgaaattcctggcttgagagatgaggaaaattgcccagctctt
cctcatgcttgctcttgttctgaagtcagcaaaggaccacttggacctcctggacccccg
ggtggtccaggggttcgaggaccaaagggccaccgtggtgatccaggtccaaagggccca
gatggcccacgtggtgaaactggtactccaggacctcaagggcctccaggacctcaagga
ccaagtggactttctattcaggggcttccaggaccatcaggagaaaaaggagagaaggga
gatcttggcccccctggcttacagggcgtcccaggagcatcaggatcacctggacgggat
ggaactcaaggtcaaaggggcctgcctggcaaagatggacccatgggatcacaaggtcct
cctgggccagtgggaatacctggtgctccaggtgttccaggtgttactggaaaccctggg
cctcaaggtgatgttggacctcctggtgttccaggtacaaagggtgagaggggtgaacgg
ggcgatgttcagtcccatgccatggtgcgtgcagttgctcgtcaagtatgtgaacagctt
atccagggtcacatggccagatataattcaatcctgaaccagattccaagtcactctctg
tcaacaagaactgttccaggacctcctggtgagccaggccgcccaggatctcctgggcca
ccaggagaacaaggatcaccaggaagaccaggatttccaggaaatcctggccagccagga
agaccaggagaaagaggtttgcctggcgagaggggagagaaaggcagtacagggcttgga
acacaaggacccagaggcccaccagggcctgcaggaccctcaggtgaaagccgaaccgga
agcccaggcccgccaggctccccaggtccacgaggaccaactgggcatacaggttccccc
gggccacagggttcttcaggtccaccagggtactgtgacccttcttcctgtgctggttac
ggtgtgggaggtggatacagtgatccaactgatcaagacatacctgtagtgcaattgcca
cataactcctaccaaatctatgaccctgaggatctttacgacggtgagcaacagccgtat
gtagttcatgggtcctaccctgtaccagcaccatactcccagtcctatgcagaacctcat
ctcgctcaaccagaatttactccagttcgggaagagatggaagctgttgaattgagatcc
ccaggaattagccacttccccaggaaaatatctaaaagaagtatgaactttccagcacgc
aagagggaaactgggaaaaagaactcttaa
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integrated database retrieval system
