Gavialis gangeticus (Gharial): 109305347
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Entry
109305347 CDS
T07453
Symbol
RFWD2
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn04115
p53 signaling pathway
ggn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109305347 (RFWD2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
109305347 (RFWD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggn04121
]
109305347 (RFWD2)
Enzymes [BR:
ggn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109305347 (RFWD2)
Ubiquitin system [BR:
ggn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109305347 (RFWD2)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109305347 (RFWD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
WD40_MABP1-WDR62_2nd
zf-RING_2
zf-RING_UBOX
Beta-prop_EML
Beta-prop_CAF1B_HIR1
zf-C3HC4_3
Beta-prop_DCAF4
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
WD40_RFWD3
RING_XB3-XBAT31
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
Sina_RING
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
109305347
NCBI-ProteinID:
XP_019383896
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MTLSDRRLPPGGRAQDTAVQTWIYYILSQVQRVTPKGHPVLVERVTEIMINVYPDQTTCS
EPSPIKEAPPFLPEMETLADVKVWFTDGTARGCAWRAAALRIQDGKQVVLQDLGKSVRYA
KVKAVLRVAVWELLKGPRPVKPIYIYSDSWMVVEGWRVYYPSYYPDINELAPEDLKEWPD
PEEHSPETRSDDLHVVQLQYPSWKKPATPEQPGGGAAGSSSGGGGGGSRKRPLLTPLCNG
LLNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDH
LYPNFLVNELILKQKQRYEEKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLV
QKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPV
SEDSTVPQCETPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFED
LEQCYFSTRMTRVTDDSRTTSQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSS
IEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLL
ASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLD
NSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAK
FVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYL
YYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIK
VLELV
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgactctgtcagaccgccggttgccacctgggggaagagcccaagacaccgcagtacag
acgtggatttattacatcttgagccaggtccaacgagtaaccccaaagggacaccctgtg
ttagttgaaagagtcacagaaattatgattaatgtttaccctgaccaaacaacctgcagt
gaaccttcacccatcaaagaagcacctcctttcttgcctgaaatggagaccttggctgat
gtcaaagtctggtttacagatggaactgctcgaggttgtgcctggagagcagctgccttg
aggattcaagatggcaagcaagtagtattacaagaccttggaaaaagcgtgcggtatgcc
aaagtcaaagcagtgctccgtgtggctgtgtgggaattattaaaaggtccacgtcctgta
aagcccatttatatttatagcgactcctggatggtggtagaaggatggcgtgtctactat
ccttcttattacccagatattaatgaacttgctcctgaagatctaaaggagtggcctgac
cctgaagagcattccccggaaacgcgctcagatgatcttcacgtggtccagctgcagtat
ccatcttggaagaaacctgccaccccagagcaacctggcggcggcgccgccggctcctcc
tcgggcggcggcggcggcggcagcaggaagaggcccctgctgactccgctctgcaacggg
ctcctcaactcctacgaggacaagagcaacgacttcgtgtgccctatctgttttgatatg
attgaagaagcatacatgacgaaatgtggacacagcttctgctataaatgtattcatcaa
agcttggaggacaacaacagatgccccaaatgtaactatgttgttgataacatagaccat
ctttaccccaactttttagtaaatgagctgatccttaaacagaagcagagatatgaagaa
aagcggtttaaattggaccattcaaatggccacagatggcagatatttcaagatttattg
ggaactgatcaagacaaccttgatttagccaatgttaacctgatgttagagctgctagtg
caaaagaagaagcagcttgaggcagagtcccatgctgcacagctgcagatccttatggaa
tttctgaaggttgccaggagaaataagagagagcaactggaacagatccagaaggagcta
agtgttttggaagaggatattaaacgagtagaggaaatgagtggcttgtactccccagtc
agcgaggatagtactgtgcctcagtgtgaaactccctcaccgtcacacagtagtattatt
gattctacggaatacagccagcctccagggttcagtggcagttctcagaccaaaaagcaa
ccatggtataatagtacattggcatcgaggcggaagaggctcacggctcattttgaggac
ctagagcagtgctatttttctaccaggatgactcgtgtaacagatgacagtagaactaca
agccagctggatgaatttcaggagtgcctatccaagtttactcgctacaattccgtccga
cccttggcaacactgtcttatgctagtgacctctataatggctccagcatagtatctagt
attgaattcgaccgggactgtgactattttgccattgctggggtgacaaagaagattaaa
gtctacgagtatggcacagtcattcaggatgcagtggacattcattaccctgagaatgaa
atgacctgtaattccaaaatcagctgtatcagctggagtagctaccacaagaatttgtta
gccagcagtgactatgaaggcaccgttatcctttgggatggattcacaggacagaggtcc
aaggtctatcaggagcatgagaaaagatgctggagtgttgactttaacttgatggaccca
aaactactggcttcaggctctgatgatgcaaaagtgaagctgtggtctaccaacctggac
aattcagtagcgagtattgaggccaaggctaatgtgtgttgtgtcaagttcagcccctct
tctaggtaccacctggcttttggctgtgcagatcactgtgttcactactatgatcttcgc
aacactaaacagccaatcatggtgtttaaagggcatcgcaaggctgtctcttatgcaaag
tttgtgagtggggaagaaattgtctctgcgtcaacagacagtcagctgaagctgtggaac
gttgggaaacctcactgcctgcgctccttcaagggccacatcaacgagaagaattttgta
ggcctggcatccaatggagactatattgcctgtggaagtgaaaataactccctctacctg
tactataagggcctctcaaagacactgttgactttcaagtttgacacagtcaaaagtgtc
ctggacaaggaccggaaggaggatgacacaaatgaattcgtcagtgctgtgtgctggagg
gcgctgccagatggggaatccaatgtgctgattgctgctaacagtcagggtacaattaag
gtactggagctggtatga
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integrated database retrieval system
