KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101128950
Entry
101128950         CDS       T02442                                 
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X3
  KO
K13126  polyadenylate-binding protein
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo03015  mRNA surveillance pathway
ggo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101128950 (PABPC1L)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101128950 (PABPC1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ggo03019]
    101128950 (PABPC1L)
   03041 Spliceosome [BR:ggo03041]
    101128950 (PABPC1L)
Messenger RNA biogenesis [BR:ggo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     101128950 (PABPC1L)
   mRNA cycle factors
    Stress granule specific factors
     101128950 (PABPC1L)
Spliceosome [BR:ggo03041]
 Complex C
  Other components
   Complex C specific factors
    101128950 (PABPC1L)
SSDB
Motif
Pfam: RRM_1 MLLE RRM_10 RRM_7 RRM_5 RRM_Nup35 RRM_MARF1 RRM_occluded
Other DBs
NCBI-GeneID: 101128950
NCBI-ProteinID: XP_030860740
Ensembl: ENSGGOG00000004584
LinkDB
Position
21:join(57142155..57142347,57144666..57144859,57148771..57148886,57150922..57151061,57151199..57151293,57153612..57153749,57156186..57156281,57162488..57162754,57164935..57165025,57165650..57165778,57167983..57168089,57169231..57169324,57170653..57170783,57171266..57171334)
AA seq 619 aa
MNASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS
TFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRERE
AELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEK
HEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKN
LDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT
KPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAMPQPPAQAAY
YGCGPVTPTQPAPRWTSQPPRPSSAYPPGASVVRPPAVPRRPPAHISSVRQASTQVPRTV
PHTQRVANIGTQTTGPSGVGCCTPGRPLLPCKCSSAAHSTYRVQEPAVHIPGQEPLTASM
LAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDE
AVAVLQAHQAMEQPKAYMH
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgaacgccagcggttctggctacccgcttgcctcgctttacgtgggcgatctgcacccc
gacgtgaccgaggccatgctctatgagaagttctctcccgccggccccatcctgtccatc
cgcgtgtgccgcgatgtagccacccggcgctcgctgggctacgcctacatcaacttccag
cagcccgcggacgcggagcgggcactggacacaatgaactttgagatgctcaaaggccag
cctattcgcatcatgtggtcccagcgagacccaggacttcgcaagtcaggtgtgggcaac
atcttcatcaagaacctggaggactccattgacaacaaggctttatatgataccttctcc
acctttgggaacatcctctcttgcaaggtggcgtgtgacgagcatggctcccggggtttc
ggctttgtccattttgagacccatgaggccgcacagcaggccatcaacaccatgaatggg
atgctgctgaatgaccgcaaagtctttgtgggccacttcaagtctcgacgggagcgggag
gcggagctgggggcgcgggccctggagttcaccaacatctacgtgaagaacctcccggtg
gatgtggacgagcaaggcctgcaggacctcttctcccagtttgggaaaatgctgagtgtg
aaggtgatgagggacaacagcggccactcgcggtgctttggctttgtcaactttgagaag
catgaggaagcccagaaggccgtggtccatatgaacgggaaggaggtgagcgggcggctg
ctgtacgcgggccgggcccaaaagcgcgtggagcggcagaatgaactgaagcgcaggttt
gagcagatgaagcaggaccggctgaggcgttaccagggtgtgaacttgtacgtgaagaac
ctggacgactccattgatgacgacaaactgaggaaagagttctctccctatggagtaatt
accagtgcgaaggtgatgacagagggtggccacagcaaggggtttggctttgtgtgtttt
tcctccccagaagaggcgacaaaggccgtgacagagatgaacgggcgtatcgtgggcacc
aagccactctacgtggcactggcccagcgcaaagaggagcggaaggccatcttgaccaac
cagtacatgcagcgcctctccaccatgcggaccctgagcaaccccctcctgggctccttt
cagcagccctccagctacttcctgcctgccatgccccagcctccagcccaggctgcatac
tatggctgtggcccagtgacacccacccagcctgcccccaggtggacgtcccagccacct
agaccttcctctgcataccctccaggtgcctcagtggtccggccaccagctgtgcctcgg
cgccccccggcccacatcagcagtgtcaggcaggcctccacccaggtgccacgcacggtg
cctcatacccagagagtagccaacattggtactcagaccacaggacccagtggggtagga
tgctgtacaccaggccggcctctcctgccgtgcaaatgttcctcagcagcgcatagcacc
tatcgggtccaggagccggctgtgcacatcccaggacaggagcccctgaccgcgtccatg
ctggctgcggcgcccctgcatgagcaaaagcagatgattggggagcgtctctaccccctt
atccatgatgtccacacccagctggctggcaagatcacgggcatgctgctggagattgac
aactcggagctgttgctcatgctggagtctccagaatccctccatgccaagatagacgag
gcagtggccgtgctgcaggcacaccaggctatggagcagccgaaggcgtacatgcactga

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