KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101129402
Entry
101129402         CDS       T02442                                 
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X4
  KO
K08060  MHC class II transactivator [EC:2.7.11.1]
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo04612  Antigen processing and presentation
ggo05145  Toxoplasmosis
ggo05152  Tuberculosis
ggo05164  Influenza A
ggo05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09150 Organismal Systems
  09151 Immune system
   04612 Antigen processing and presentation
    101129402 (CIITA)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    101129402 (CIITA)
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    101129402 (CIITA)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    101129402 (CIITA)
  09163 Immune disease
   05340 Primary immunodeficiency
    101129402 (CIITA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ggo01001]
    101129402 (CIITA)
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:ggo04054]
    101129402 (CIITA)
Enzymes [BR:ggo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     101129402 (CIITA)
Protein kinases [BR:ggo01001]
 Serine/threonine kinases: Other
  TAF1 family
   101129402 (CIITA)
Pattern recognition receptors [BR:ggo04054]
 Cytoplasmic pattern recognition receptors
  NOD-like receptors
   101129402 (CIITA)
SSDB
Motif
Pfam: NACHT LRR_6 NLRC4_HD2 LRR_4 LRR_8 LRR_14 LRR_9
Other DBs
NCBI-GeneID: 101129402
NCBI-ProteinID: XP_004057244
Ensembl: ENSGGOG00000014044
LinkDB
Position
18:join(14516755..14516806,14535662..14535808,14536049..14536144,14539050..14539112,14539305..14539382,14541899..14541943,14542422..14542568,14543042..14543185,14544114..14544278,14545126..14545194,14546875..14548525,14549405..14549563,14550565..14550636,14555940..14556020,14556738..14556830,14558818..14558904,14562541..14562624,14562781..14562864,14563602..14563677)
AA seq 1130 aa
MRCLAPRPAGSYLSEPQGSSQCATMELGPLEGGYLELLNSDADPLCLYHFYDQMDLAGEE
EIELYSEPDTDTINCDQFSRLLCDMEGDEETREAYANIAELDQYVFQDSQLEGLSKDIFK
HIGPDEVIGESMEMPAEVGQKSQKRPFPEELPADLKHWKPGEPPTVVTGSLLVGPVSDCS
TLPCLPLPALFNQEPASGQMRLEKTDQIPMPSSSSALSCLNFPEGPIQFVPTISTLPHGL
WQISEAGTGVSTIFIYHGEVPQASQVPPPSGFTVHGLPTSPDRPGSTSPFAPSATDLPSM
PEPALTSRANMTEHKTSPTQCQTAGEVSNKLPKWPEPVEQFYRSLQDTYGAEPAGPDGIL
VEVDLVRARLERSSSKSLERELATPDWAERQLAQGGLAEVLLAAKEHRRPRETRVIAVLG
KAGQGKSYWAGAVSRAWACGRLPQYDFVFSVPCHCLNRPGDAYGLQDLLFSLGPQPLVAA
DEVFSHILKRPDRVLLILDAFEELEAQDGFLHSTCGPAPAEPCSLRGLLAGLFQKKLLRG
CTLLLTARPRGRLVQSLSKADALFELSGFSMEQAQAYVMHYFESSGMTEHQDRALTLLRD
RPLLLSHSHSPTLCRAVCQLSEVLLELGEDAKLPSTLTGLYVGLLGRAALNSPPGALAEL
AKLAWELGRRHQSTLQEDQFPSADVRTWAMAKGLVQHPPGAAESELAFPSFLLQCFLGAL
WLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLIFQPRARCLGALVGPSAAA
LADRKQKVLARYLKRLQPGTLRARQLLELLHCAHEAEEAGIWQHVVQELPDRLSFLGTRL
MPPDAHVLGKALEAAGQDFSLDLRSTGICPSGLGSLVGLSCVTRFRAALSDTVALWESLR
HHGETKLLQAAEEKFTIEPFKAKSLKDVEDLGKLVQTQRTRSSSEDTAGELPAVRDLKKL
EFALGPISGPQAFPKLVRILTAFSSLQHLDLDALSENKIGDDGVSQLSATFPQLKSLETL
NLSQNNITDLGAYKLAEALPSLAASLLRLSLYNNCICDMGAESLARVLPDMVSLRVMDVQ
YNKFTAAGAQQLAASLRRCPHVETLAMWTPTIPFSVQEHLQQQDSRISLR
NT seq 3393 nt   +upstreamnt  +downstreamnt
atgcgttgcctggctccacgccctgctgggtcctacctgtcagagccacaaggcagctca
cagtgtgccaccatggagttggggcccctagaaggtggctacctggagcttcttaacagc
gatgctgaccccctgtgcctctaccacttctatgaccagatggacctggctggagaagaa
gagattgagctctactcagaacccgacacagacaccatcaactgtgaccagttcagcagg
ctgttgtgtgacatggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaa
ctggaccagtatgtcttccaggactcccagctggagggcctgagcaaagacattttcaag
cacataggaccagatgaagtgatcggtgagagtatggagatgccagcagaagttgggcag
aaaagtcagaaaagacccttcccagaggagcttccggcagacctgaagcactggaagcca
ggtgagccccccactgtggtgactggaagtctcctagtgggaccagtgagcgactgctcc
accctgccctgcctgccactgcctgcgctgttcaaccaggagccagcctccggccagatg
cgcctggagaaaaccgaccagattcccatgccttcctccagttccgcgttgagctgcctg
aatttccctgagggacccatccagtttgtccccaccatctccactctgccccatgggctc
tggcaaatctctgaggctggaacaggggtctccactatattcatctaccatggtgaggtg
ccccaggccagccaagtaccccctcccagtggattcactgtccatggcctcccaacatct
ccagaccggccaggctccaccagccccttcgctccatcagccactgacctgcccagcatg
cctgaacctgccctgacctcccgagcaaacatgacagagcacaagacgtcccccacccaa
tgccagacagctggagaggtctccaacaagcttccaaaatggcctgagccggtggagcag
ttctaccgctcactgcaggacacgtatggtgccgagcccgcaggccctgatggcatccta
gtggaggtggatctggtgcgggccaggctggagaggagcagcagcaagagcctggagcgg
gaactggccaccccggactgggcagaacggcagctggcccaaggaggcctggctgaggtg
ctgttggctgccaaggagcaccggcggccgcgtgagacacgagtgattgctgtgctgggc
aaagctggtcagggcaagagctattgggctggggcagtgagccgggcctgggcttgtggc
cggcttccccagtacgactttgtcttctctgtcccctgccattgcttgaaccgtccgggg
gatgcctatggcctgcaggatctgctcttctccctgggcccacagccactcgtggcggcc
gatgaggttttcagccacatcttgaagagacctgaccgtgttctgctcatcctagacgcc
ttcgaggagctggaagcgcaagatggcttcctgcacagcacgtgcggaccggcaccggcg
gagccctgctccctccgggggctgctggccggccttttccagaagaagctgctccgaggt
tgcaccctcctcctcacagcccggccccggggccgcctggtccagagcctgagcaaggcc
gacgccctatttgagctgtccggcttctccatggagcaggcccaggcctacgtgatgcac
tactttgagagctcagggatgacagagcaccaagacagagccctgaccctcctccgggac
cggccacttcttctcagtcacagccacagccctactttgtgccgggcagtgtgccagctc
tcagaggtcctgctggagcttggggaggacgccaagctgccctccacgctcacgggactc
tatgtcggcctgctgggccgtgcagccctcaacagcccccccggggccctggcagagctg
gccaagctggcctgggagctgggccgcagacatcaaagtaccctacaggaggaccagttc
ccatccgcagacgtgaggacctgggcgatggccaaaggcttagttcaacacccaccgggg
gccgcagagtccgagctggccttccccagcttcctcctgcaatgcttcctgggggccctg
tggctggctctgagtggcgaaatcaaggacaaggagctcccgcagtacctagcattgacc
ccaaggaagaagaggccctatgacaactggctggagggcgtgccacgctttctggctggg
ctgatcttccagcctcgcgcccgctgcctgggagccctagtcgggccatcggcggctgcc
ttggcggacaggaagcagaaggtgcttgcgaggtacctgaagcggctgcagccggggacg
ctgcgggcgcggcagctgctggagctgctgcactgcgcccacgaggccgaggaggctgga
atttggcagcacgtggtacaggagctcccagaccgcctctcttttctgggcacccgtctc
atgcctcctgatgcacatgtactgggcaaggccttggaggcggcgggccaagacttctcc
ctggacctccgcagcactggcatttgcccctctggattggggagcctcgtgggactcagc
tgtgtcacccgtttcagggctgccttgagcgacacagtggcgctgtgggagtccctgcgg
catcatggggagaccaagctacttcaggcagcagaggagaagttcaccatcgagcctttc
aaagccaagtccctgaaggatgtggaagacctgggaaagcttgtgcagactcagaggacg
agaagttcctcggaagacacagctggggagctccctgctgttcgggacctaaagaaactg
gagtttgcgctgggccctatctcaggcccccaggctttccccaaactggtgcggatcctc
acggccttttcctccctgcagcatctggacctggatgcgctgagtgagaacaagatcggg
gacgatggtgtctctcagctctcagccaccttcccccagctgaagtccttggaaaccctc
aatctgtcccagaacaacatcactgacctgggtgcctacaaactcgccgaggccctgcct
tcactcgctgcatccctgctcaggctaagcttgtacaataactgcatctgcgacatggga
gccgagagcttggctcgtgtgcttccggacatggtgtccctccgggtgatggacgtccag
tacaacaagttcacggctgccggggcccagcagctcgctgccagccttcggaggtgtcct
catgtggagacgctggcgatgtggacgcccaccatcccattcagtgtccaggaacacctg
caacaacaggattcacggatcagcctgagatga

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