KEGG T02442: 101130878

Gorilla gorilla gorilla (western lowland gorilla): 101130878

Entry

101130878         CDS       T02442

Symbol

VARS1

Name

(RefSeq) valine--tRNA ligase isoform X2

K01873

valyl-tRNA synthetase [EC:6.1.1.9]

Organism

ggo Gorilla gorilla gorilla (western lowland gorilla)

Pathway

ggo00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:ggo00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    101130878 (VARS1)
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ggo01007]
    101130878 (VARS1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ggo03016]
    101130878 (VARS1)
Enzymes [BR:ggo01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     101130878 (VARS1)
Amino acid related enzymes [BR:ggo01007]
Aminoacyl-tRNA synthetase
  Class I (U)
   101130878 (VARS1)
Transfer RNA biogenesis [BR:ggo03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    101130878 (VARS1)
Prokaryotic type
    101130878 (VARS1)

SSDB

Motif

Pfam:

tRNA-synt_1 Anticodon_1 GST_C tRNA-synt_1g tRNA-synt_1_2 GST_C_2 Jag_N Arc1p_N_like

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

5:complement(join(49380461..49380529,49381838..49382163,49382296..49382407,49382479..49382685,49382869..49383024,49383312..49383439,49383576..49383654,49383741..49383809,49383890..49383994,49384352..49384477,49384562..49384632,49384718..49384823,49384958..49385048,49385156..49385314,49385401..49385504,49385592..49385716,49385967..49386057,49387086..49387180,49387266..49387374,49387467..49387586,49388118..49388199,49388445..49388609,49394479..49394606,49394740..49394840,49395086..49395170,49395263..49395387,49395628..49395766,49395857..49395991,49397693..49398079))

AA seq 1264 aa
MSILYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRICLQPPPTSRTPFPPPRLPAL
EQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPALG
LRSSAQDPQAVLGALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLDPPA
RRIWNNVTRWFVTCVRQPEFRAVLGEVVLYSGARPLSHQPGPEAPTLPKTAAQLKKEAKK
REKLEKFQQKQKIQQQQPPSGEKKPKPEKREKRDPGVITYDLPTPPGEKKDVSGPMPDSY
SPRYVEAAWYPWWEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNAI
QDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFLQEVWKWK
EEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSAAVTEAFVRLHEEGVIYRSTRLVNWSCT
LNSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIET
MLGDVAVAVHPKDTRYQHLKGKNVIHPFLSRSLPIVFDEFVDMDFGTGAVKITPAHDQND
YEVGQRHGLEAISIMDSRGALINVPPPFLGLPRFEARKAVLVALKERGLFRGIEDNPMVV
PLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIREWC
ISRQLWWGHRIPAYFVTVNDPAVPPGEDPDGRYWVSGRNEAEAREKAAKEFGVSPDKISL
QQDEDVLDTWFSSGLFPLSILGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKL
TGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISLQGLHDQLLNSNLDPSEVE
KAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFA
LRGLGKGFVPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWLY
ELCDVYLECLKPVLNGVDQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRMP
QAPPSLCVTPYPEPSECSWKDPEAEAALELALSITRAVRSLRADYNLTRIRPDCFLEVAD
EATGALASAVSGYVQALASAGVVAVLALGAPAPQGCAVALASDRCSIHLQLQGLVDPARE
LGKLQAKRVEAQRQAQRLRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEAIALF
QKML

NT seq 3795 nt +upstreamnt +downstreamnt
atgtccatcctctacgtctcccctcacccagatgccttccccagcctccgagccctcata
gccgctcgctatggggaggctggggagggtcccggatggggaggagcccacccccgcatc
tgtctccagccacccccgactagcaggactccctttcccccaccccgcctgccggccctg
gagcaggggcccggtgggctctgggtgtggggggccacggctgtggcccagctgctgtgg
ccagcaggcctggggggcccagggggcagccgggcggctgtccttgtccaacagtgggtc
agttacgccgacacggagttaataccagctgcctgtggagcaacgctaccggccctggga
ctccgaagctcggcccaggacccccaggctgtgctgggggccctgggcagggccctgagc
cccttggaggagtggcttcggctgcacacctacttggccggggaggcccccactctggct
gacctggcggctgtcacagccttgctgctgcctttccgatacgtcctagacccacctgcc
cgccggatctggaataatgtgactcgctggtttgtcacgtgtgtccggcagccagaattc
cgagccgtgctaggagaagtggttctatactcaggagccaggcctctctctcatcagcca
ggccccgaggctcctaccctcccaaagacagctgctcagctcaagaaagaggcaaagaaa
cgggagaagctagagaaattccaacagaagcagaagatccaacagcagcagccaccttca
ggggagaagaaaccaaaaccagagaagagggagaaacgggatcctggggtcattacctat
gacctcccaaccccacccggggaaaagaaagatgtcagtggccccatgcccgactcctac
agccctcggtatgtggaggctgcctggtacccttggtgggagcagcagggcttcttcaag
ccagagtatgggcgtcctaatgtgtcagcagcaaatccccgaggtgtcttcatgatgtgc
atcccaccccccaatgtgacaggctccctgcacctgggccatgcactcaccaacgccatc
caggactccctgactcgatggcaccgcatgcgtggggagaccaccctgtggaaccctggc
tgtgaccatgcaggtattgccacccaggtggtggtggagaagaagctatggcgtgagcag
ggactgagccggcaccagctgggccgcgaggcctttctacaggaagtctggaagtggaag
gaggagaaaggtgaccggatttaccaccagttgaagaagcttggcagctccttggactgg
gatcgagcctgtttcaccatggaccctaaactctcagcagctgtgacagaggcctttgtc
cggcttcacgaggaaggcgtcatctatcgcagtacccgccttgttaactggtcctgcacc
ctcaactccgccatctctgacattgaggtggataagaaggagctgacaggtcgcaccctg
ctctccgtgcctggctacaaggagaaggtggagttcggggtcctcgtgtcctttgcctat
aaggtccaaggctcagatagcgacgaggaggtggtggtggcaacaactcggatcgagaca
atgctgggagatgtggctgtagctgtgcaccccaaagataccagataccagcacctgaag
gggaagaacgtgatccacccattcctgtctcggagccttcccattgtcttcgatgaattt
gtggacatggacttcggcacaggtgctgtgaagatcacccccgcacatgaccaaaatgac
tatgaagttgggcagcggcacgggctggaggccatcagcatcatggactcccggggggcc
ctcatcaatgtgcctccgcctttcctgggcctgcccaggtttgaggccaggaaagcggtg
ctggtggcgctgaaggagcggggactgttccgtggcattgaggacaaccccatggtggtg
ccactttgcaaccggtcgaaggacgtggtagagcctctgctgcggccgcagtggtacgtt
cgctgcggggagatggcccaggctgccagcgccgctgtgactcggggtgacctccgcatc
ctgcctgaggcccatcagcgcacatggcatgcctggatggacaacatccgggagtggtgc
atttccaggcagctgtggtggggccatcgcatcccagcctactttgtcactgtcaatgac
ccagcggtgccccctggggaggaccctgatgggcggtactgggtgagtggacgcaatgag
gcagaggcccgggagaaggcagccaaggagttcggagtgtcccctgacaagatcagtctc
cagcaagatgaggatgtattggatacctggttctcctccggcctcttccccttatccatt
ttgggctggcccaaccagtcagaagacctgagtgtgttctaccccgggacactgctggag
accggtcacgacatcctcttcttctgggtggcccggatggtcatgctgggcctgaagctc
acgggcaggctgccctttagagaggtctacctccatgccatcgtgcgagatgctcacggc
cgcaagatgagcaagtctctaggcaatgtcatcgatcccctggacgtcatctatggaatc
tccctgcagggcctccacgaccagctgctgaacagcaacctggatcccagcgaggtggag
aaggccaaagaagggcagaaagctgacttcccagcggggattcccgaatgtggcaccgat
gctctccggtttggattatgtgcctacacgtcccagggtcgtgacatcaacctggatgtg
aaccggatactgggttaccgccacttctgcaacaagctctggaatgccaccaagtttgcc
cttcgtggccttgggaagggttttgtgccctcacccacctcccagcccggaggccatgag
agcctggtggaccgctggatccgcagccgcctgacagaggctgtgaggctcagcaatcaa
ggcttccaggcctacgacttcccggccgtcaccactgcccagtacagcttctggctctat
gagctctgtgatgtctacttggagtgcctgaaacctgtactgaatggggtggaccaggtg
gcagctgagtgtgcccgccagaccctgtacacttgcctggacgttggcctgcggctgctc
tcacccttcatgcccttcgtgacggaggagctgttccagaggctgccccggaggatgccg
caagctccccctagcctctgtgttaccccctacccggagccctcagagtgctcctggaag
gaccccgaggcagaagccgcccttgagctggcgctaagcatcacgcgagccgtgcgctcc
ctgcgagccgactacaacctcacccggatccggcctgactgtttcctggaagtggcagat
gaggccacgggcgccctggcatcggcggtgtcgggctacgtgcaggccctggccagcgca
ggtgtggtggctgttctggccctgggggctcccgccccccagggttgcgctgtggctctg
gcttctgatcgctgctccatccacctgcagcttcaggggctggtggaccctgcacgggag
ctgggcaagctgcaagccaagcgagttgaggcccagcggcaggcccagcgtctacgggaa
cgccgtgctgcctcgggctatcctgtcaaggtgccgctcgaagtccaggaggcagatgaa
gccaagctccaacagacagaagcagagctcaggaaggtggatgaggccatcgccctattc
cagaagatgctgtga

DBGET integrated database retrieval system