KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101132037
Entry
101132037         CDS       T02442                                 
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
  KO
K12600  superkiller protein 3
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101132037 (SKIC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ggo03019]
    101132037 (SKIC3)
Messenger RNA biogenesis [BR:ggo03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     101132037 (SKIC3)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_19 TPR_8 TPR_16 TPR_14 TPR_17 TPR_CcmH_CycH TPR_11 TPR_12 ANAPC3 TPR_9 Fis1_TPR_C ARM_TT21_2nd ARM_TT21_C ARM_TT21_5th TPR_15 TPR_5 TPR_20 Sel1 T7SS_EccA1_N BTAD Retrotran_gag_2 TPR_30 Coatomer_E TPR_6 DUF7017
Other DBs
NCBI-GeneID: 101132037
NCBI-ProteinID: XP_030866971
Ensembl: ENSGGOG00000025709
LinkDB
Position
4:complement(join(99614600..99614674,99617838..99617961,99619749..99619879,99628262..99628414,99632447..99632605,99634698..99634819,99640830..99640958,99644252..99644363,99644534..99644587,99646986..99647058,99647938..99648159,99652462..99652585,99653396..99653520,99656518..99656595,99659191..99659284,99662388..99662529,99663481..99663555,99664766..99664834,99666253..99666309,99666425..99666486,99666572..99666650,99666814..99666958,99667044..99667220,99670613..99670715,99671950..99672203,99673094..99673218,99673546..99673725,99674356..99674482,99675289..99675392,99675478..99675564,99677915..99678054,99678902..99679003,99679989..99680129,99686731..99686839,99686957..99687055,99690599..99690739,99691218..99691293,99691731..99691822,99693093..99693236,99696994..99697083))
AA seq 1564 aa
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
SAYKKAAELEPDQLLAWQGLANLYEKYNHINAKDDLPGVYQKLMDLYESVDKQKWCDVCK
KLVDLYYQEKKHLEVARTWHKLIKTRQEQGAENEELHQLWRKLTQFLAESTEDQNNETQQ
LLFTAFENALGLSDKIPSEDHQVLYRHFIQSLSKFPHESARLKKACEGMINIYPTVQYPL
EVLCLHLIESGNLTDEGQQYCCRLVEMDSKSGPGLIGLGIKALQDKKYEDAVRNLTEGLK
ESPVCTSGWYHLAEAQVKMHRPKEAVLSCSQALKIIDNLGASGNRLYQRNLCLRLKAEAL
IKLSDYDSSEEAIRTLDQISDADNIPGLLVLKSLAYRNKGSFDEAAKIMEDLLSSYPDLA
EVHALEALIHFTKKDYLQAEKCFQRALEKDTEVAEYHYQLGLTYWFMGEETRKDKTKALT
HFLKAARLDTYMGKVFCYLGHYYRDVVGDKNRARGCYRKAFELDDTDAESGAAAVDLSVE
LEDMEMALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESIYSVFKVAAIQQILGKYKEAVAQYQMIIK
KTEDYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEYFTCALQHRADVSCLWKLA
GDACTCLYAVSPSKVNVHVLGVLLGQKEGKQVLKKNELLHLGGRCYGRALKLMSTSNTWC
ELGINYYRQAQHLAETGSNMNDLKELLEKSLHCLKKAVRLDSNNHLYWNALGVVACYSGI
GNYALAQHCFIKSIQSEQINAVAWTNLGVLYLTNENIEQAHEAFKMAQSLDPSYLMCWIG
QALIAEAIGSYDTMDLFRHTTELNMHTEGALGYAYWVCTTLQDKSNRETELYQYNILQMN
AIPAAQVILNKYVERIQNYAPAFTMLGYLNEHLQLKKEAANAYQRAILLLQTAEDQDTYN
VAIRNYGRLLCSIGEYDKAIQAFKSTPLEELEDIIGFALALFMKGLYKESSKAYERALSI
VESEQDKAHILTALAITEYKQGKMDVAKTLLFKCSILKEPTTESLQALCALGLAMQDATL
SKAALNELLKHIKHKDSNYQRCLLTSAIYALQGRSVAVQKQVSKAVHSNPGDPALWSLLS
RVVAQYAQRNAKGGVVAGNVAHILDSNHGKKALLYTAVNQLAMGSSSAEDEKNIALKTIQ
KAALISPGDPAIWAGLMAACHADDKLALVNNTQPKRIDLYLALLSAVSASIKDKKFFENY
NQSLEKWSLSQAVTGLIDTGRISEAETLCTKNLKSNPDQPAVILLLRQVQCKPLLESQKP
LPDAVLEELQKTVMSNSTSVPAWQWLAHVYQSQGMMRAAEMCYRKSLQVASQQGSWSGKL
SSLLRLALLALKVCMANISNDHWPSLVQEATTEALKLCFCPLAVLLQALLQFKRKMGARE
TRRLLERVVYQPGYPKSIASTARWYLLRHLYAKDDYELIDVLVNNAKTHGDTRALELNQR
LSSQ
NT seq 4695 nt   +upstreamnt  +downstreamnt
atgtccagcaaggaagtgaagactgctctaaaaagtgctagagatgcaatcagaaacaaa
gaatacaaagaagctttgaaacactgtaagacagtgttaaagcaagagaaaaataactat
aatgcctgggtttttattggtgttgctgcagctgaactagaacaacctgatcaggcccag
agtgcgtataaaaaagctgctgaattagagccagaccaattactagcttggcaggggtta
gcaaacttgtatgagaaatataatcacataaatgctaaggatgacttgcctggtgtttac
caaaagctcatggatctttatgagagtgttgacaaacagaagtggtgtgatgtctgcaag
aaacttgtggatctgtattaccaagaaaagaaacacctagaggtggctcgaacatggcac
aagttgataaaaacacggcaggaacaaggtgcagaaaatgaagagcttcatcaactatgg
agaaaattgactcagttcctggctgaaagtacagaggaccagaataatgaaactcagcaa
ttgctttttactgcttttgagaatgcactgggattatcagataagattcctagcgaagat
caccaagtactttataggcatttcattcagagtttatccaaatttcctcatgagtctgct
agattgaagaaggcctgtgaaggaatgataaacatctatcctactgtacagtatccatta
gaagtgctttgtttgcatttaattgaatcaggaaatcttactgatgaggggcagcagtat
tgttgtagattagtggaaatggattcaaaaagtggtccaggcctcattggcttaggcatt
aaagcattacaagacaaaaagtatgaagatgctgttaggaacctaacagaagggttaaag
gaaagccctgtctgcacaagtggatggtatcatctggcagaagcccaagtcaaaatgcat
agacctaaagaagctgttctttcatgcagtcaagctctgaagatcatagataatcttggt
gcgtctggtaaccgtctttatcagaggaatctttgtcttcgtttgaaagcagaggctttg
attaaactctcagattatgactcttcagaggaagcaattcgtacgcttgatcagatttct
gatgcagataatatcccaggacttttggttctcaaaagcttggcctatcggaacaaaggt
tcatttgatgaagctgcaaagattatggaagaccttctgtcttcttaccctgacctagct
gaagttcatgcccttgaggctttgattcatttcaccaaaaaggactatctacaagcagaa
aaatgttttcagagagctcttgagaaagataccgaagttgcagaatatcattaccaactt
ggattaacatactggttcatgggtgaagagacaagaaaagataaaacaaaggctcttacc
cactttctgaaggctgcaagactggatacatatatgggcaaagttttctgctatttaggt
cattattatagagacgtagtgggagataaaaacagagctcgtggatgttataggaaagcc
tttgaattagatgacactgatgctgaatctggagctgcagcggttgacctaagtgtggag
cttgaagatatggaaatggctttagctatcctaacaacagtaactcaaaaggcaagtgct
ggaacggcaaaatgggcctggcttaggcgaggactatactatttgaaagctggtcagcat
tctcaagcagtggctgatttacaggcagcattaagagcagacccaaaggacttcaattgt
tgggaatcgttaggagaagcatacttaagcagaggaggctacacaacagccttgaagtcc
ttcacaaaagccagtgagctgaacccagaatccatatacagtgtgtttaaggttgcagca
atacagcaaatcctaggcaaatataaggaggctgtagctcaataccagatgatcattaaa
aagacagaagattatgtgcctgctttaaaaggtttgggtgaatgccatcttatgatggca
aaagcagctctagttgattatcttgatggaaaagccgtagactacatagaaaaagcactg
gaatattttacttgtgctctacagcatcgagctgatgtgtcctgcctctggaagctagct
ggggatgcttgtacctgtctgtatgctgtctcaccatctaaagtgaatgttcatgtttta
ggagtccttctaggtcagaaagaaggaaaacaagtattaaagaaaaatgagctcctccac
cttggaggaaggtgttatggtcgtgcattaaaactgatgtctacatctaatacatggtgt
gaacttggaattaattattatcgccaagcacaacatctagcagaaacaggcagcaacatg
aatgatcttaaggagttgctggagaaatctttacattgtctgaaaaaagcagtgagactc
gacagtaataatcacttatactggaatgctcttggtgtggttgcatgttacagtggtatt
ggaaattatgcccttgctcagcactgtttcatcaaatcaatccagtcagaacaaattaat
gctgttgcatggaccaacttgggagtgttatacctcacaaatgaaaatattgagcaagct
catgaagctttcaaaatggcccaatcccttgatccatcttatttaatgtgctggattgga
caagctcttattgctgaggcaattggaagttatgacaccatggatctcttcaggcacact
acagaactaaatatgcataccgaaggagcattaggttatgcgtattgggtctgcacaaca
ttgcaagataaaagcaacagagaaacagagctgtaccaatacaacatcctccagatgaat
gctattccagcagcacaagttattttgaataaatatgtagaaagaattcagaattatgcc
ccagctttcacaatgttgggttacttaaacgaacatctacaactgaaaaaggaagcagca
aatgcataccaaagggcaattttgttgttacagactgcagaagaccaagatacttacaat
gttgcaataagaaattacggcagattgttatgttccattggtgaatatgataaagctatc
caggcttttaagtcaacaccccttgaagagttagaagacatcataggttttgcattggct
ttattcatgaaggggctttataaagagagcagcaaagcctatgagagagccttgtctatt
gttgaatcggagcaagacaaagcccatatcttgacagctctggcaataactgaatataaa
caaggaaaaatggatgtagccaagacattgctatttaaatgctctatcttaaaggaacca
accacagaaagccttcaagccctgtgtgctctagggttggcaatgcaggatgctacactg
tcaaaagcagcacttaatgagttactgaagcacataaaacacaaagacagtaattatcag
aggtgccttcttacatcagcgatttatgcactccaaggccgcagtgtggctgtgcaaaaa
caagtatctaaagctgttcacagcaaccctggtgaccctgctctttggtctctgttgtct
cgagttgttgcacagtatgctcaacgaaatgcaaagggaggtgttgtagcaggaaatgtg
gctcatattctggactcaaatcatggaaagaaggcattactgtacactgcggtaaatcag
ttggctatgggaagcagttcagcagaagatgaaaaaaatattgcgctaaagaccattcag
aaggcagctctcatttctccaggtgatcctgctatctgggctgggctaatggcagcctgt
cacgctgatgataaactggccttagtgaacaacactcagccaaagaggatagatttatac
ttggcactgttatctgctgtttctgcttcaattaaagacaaaaaattctttgaaaattac
aaccagtctcttgaaaagtggtctctgtcacaagctgtcactggtctaatagacacagga
agaatatctgaagctgaaactctctgcacaaagaatttaaaaagtaaccctgatcagcca
gccgttatcttacttttgagacaagttcagtgtaaaccactcctggagtcacaaaagcca
ctcccagatgctgtacttgaagaactacaaaaaacagtcatgtccaactcaacctctgtt
ccagcttggcagtggctggcacatgtgtatcaatcccaaggaatgatgagagctgcagag
atgtgttacagaaagagtctacaagtggcatcccaacagggcagttggagtgggaagctc
tcaagtctgttgagactagcactacttgcattaaaagtctgtatggctaacatttccaat
gatcactggccatctttggttcaagaggctacaactgaggccttgaagctttgcttttgt
cctctggctgttcttttacaagctttgttacaattcaaacgcaaaatgggggcaagagag
acacggcgtcttttggaaagagtggtatatcagcctgggtatcccaaatctattgcatca
actgcacgttggtacctactgagacacttatatgccaaagatgactatgagcttattgat
gtgctggtaaacaatgccaaaactcatggagatacaagagcattggaactgaatcagaga
ttgtcctcacaataa

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