KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101133871
Entry
101133871         CDS       T02442                                 
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
  KO
K07466  replication factor A1
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo03030  DNA replication
ggo03420  Nucleotide excision repair
ggo03430  Mismatch repair
ggo03440  Homologous recombination
ggo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101133871 (RPA1)
   03420 Nucleotide excision repair
    101133871 (RPA1)
   03430 Mismatch repair
    101133871 (RPA1)
   03440 Homologous recombination
    101133871 (RPA1)
   03460 Fanconi anemia pathway
    101133871 (RPA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ggo03000]
    101133871 (RPA1)
   03032 DNA replication proteins [BR:ggo03032]
    101133871 (RPA1)
   03400 DNA repair and recombination proteins [BR:ggo03400]
    101133871 (RPA1)
Transcription factors [BR:ggo03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    101133871 (RPA1)
DNA replication proteins [BR:ggo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    101133871 (RPA1)
DNA repair and recombination proteins [BR:ggo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     101133871 (RPA1)
   MMR (mismatch excision repair)
     101133871 (RPA1)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     101133871 (RPA1)
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon DUF223 IBR
Other DBs
NCBI-GeneID: 101133871
NCBI-ProteinID: XP_030859378
Ensembl: ENSGGOG00000014186
LinkDB
Position
19:join(16959122..16959154,16971824..16971874,16972940..16973018,16973598..16973706,16982987..16983075,17001083..17001175,17004316..17004448,17005861..17005963,17007551..17007619,17007773..17007965,17008118..17008257,17009236..17009384,17012523..17012655,17017413..17017589,17020585..17020692,17023778..17023864,17025848..17025952)
AA seq 616 aa
MVGQLSEGAIAAIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEEQLSSNCVCQIHRFIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNE
GLGQPQVAPPAPAASPAASSRPQPQSGSSGVGSTVSKVYGASKTFGKAAGPSLSHTSGGT
QSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNE
QVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDHHLPTVQF
DFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATL
WGEDADKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQ
ALDGVSISDLKSGGVGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYR
EYGRRLVMSIRRSALM
NT seq 1851 nt   +upstreamnt  +downstreamnt
atggtcggccaactgagcgagggggccattgcggccatcatgcagaagggggatacaaac
ataaagcccatcctccaagtcatcaacatccgtcccattactacggggaatagtccgccg
cgttatcgactgctcatgagtgatggattgaacactctatcctctttcatgttggcaaca
cagttgaaccctcttgtggaggaagaacaattgtccagcaactgtgtttgccagattcac
agatttattgtgaacactctgaaagacggaaggagagtagttatcttgatggaattagaa
gttttgaagtcagctgaagcagttggagtgaagattggcaatccagtgccctataatgaa
ggactcgggcagccgcaagtagctcctccagcgccagcagccagcccagcagcaagcagc
aggccccagccgcagagtggaagctcgggagtgggttctactgtttctaaggtttacggt
gcttcaaagacatttggaaaagctgcaggtcccagcctgtcacacacttctgggggaaca
cagtccaaagtggtgcccattgccagcctcactccttaccagtccaagtggaccatttgt
gctcgtgttaccaacaaaagtcagatccgtacctggagcaactcccgaggggaagggaag
cttttctctctagaactggttgatgaaagtggtgaaatccgagctacagctttcaatgag
caagtggacaagttctttcctcttattgaagtgaacaaggtgtattatttctcgaaaggc
accctgaagattgctaacaagcagttcacagctgttaaaaatgactacgagatgaccttc
aataacgagacttccgtcatgccctgtgaggacgaccatcacttacctacggttcagttt
gatttcacggggattgatgacctcgagaacaagtcgaaagactcacttgtagacatcatc
gggatctgcaagagctatgaagacgccactaaaatcacagtgaggtctaacaacagagaa
gttgccaagaggaatatctacttgatggacacatctgggaaggtggtgactgctacactg
tggggggaagatgctgataaatttgatggttctagacagcccgtgttggctatcaaagga
gcccgagtctctgatttcggtggacggagcctctccgtgctgtcttcaagcactatcatt
gcgaatcctgacatcccagaggcctataagcttcgtggatggtttgacgcagaaggacaa
gccttagatggtgtttccatctctgatctaaagagcggcggagtcggagggagtaacacc
aactggaaaaccttgtacgaggtcaaatccgagaacctgggccaaggcgacaagccggac
tactttagttctgtggccacagtggtgtatcttcgcaaagagaactgcatgtaccaagcc
tgcccgactcaggactgcaataagaaagtgatcgatcaacagaatggattgtaccgctgt
gagaagtgcgacaccgaatttcccaatttcaagtaccgcatgatcctgtcagtaaatatt
gcagattttcaagagaatcagtgggtgacttgtttccaggagtctgctgaagctatcctt
ggacaaaatgctgcttatcttggggaattaaaagacaagaatgaacaggcatttgaagaa
gttttccagaatgccaacttccgatctttcatattcagagtcagggtcaaagtggagacc
tacaatgacgagtctcgaattaaggccactgtgatggatgtgaagcccgtggactacaga
gagtatggccgaaggctggtcatgagcatcaggagaagtgcattgatgtga

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