KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101134047
Entry
101134047         CDS       T02442                                 
Symbol
SMG7
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X3
  KO
K14409  protein SMG7
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101134047 (SMG7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ggo03019]
    101134047 (SMG7)
Messenger RNA biogenesis [BR:ggo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     101134047 (SMG7)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101134047 (SMG7)
SSDB
Motif
Pfam: EST1_DNA_bind EST1 TPR_2
Other DBs
NCBI-GeneID: 101134047
NCBI-ProteinID: XP_018883226
Ensembl: ENSGGOG00000002342
LinkDB
Position
1:complement(join(73207246..73207359,73207991..73208136,73208260..73208430,73209262..73209421,73209897..73209977,73211941..73212090,73212856..73213227,73213881..73214263,73214697..73214841,73216673..73217099,73218088..73218207,73220755..73220815,73221979..73222049,73225362..73225518,73225870..73226032,73229657..73229792,73230152..73230302,73231166..73231237,73232429..73232600,73241664..73241796,73243493..73243610,73246927..73246958,73286815..73286843))
AA seq 1187 aa
MSLQSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGILCKCPLQNESQEESYNAYP
LPAVKVSMDWLRLRPRVFQEAVVDEKQYIWPWLISLLNSFHPHEEDLSSISATPLPEEFE
LQGFLALRPSFRNLDFSKGHQGITGDKEGQQRRIRQQRLISIGKWIADNQPRLIQCENEV
GKLLFITEIPELILEDPSEAKENLILQETSVIESLAADGSPGLKSVLSTSRNLSNNCDTG
EKPVVTFKENIKPREVNRDQGRSFPPKEVRRDYSKGITVTKNDGKKDNNKRKTETKKCTL
EKLQETGKQNVAVQVKSQTELRKTPVSEARKTPVTQTPTQASNSQFIPIHHPGAFPPLPS
RPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPYSQ
QRPSGPGPMNQGPQQSQPPSQQPLTSLPAQPTAQSTSQLQVQALTQQQQSPTKAVPALGK
SPPHHSGFQQYQQADASKQLWNPPQVQGPLGKIMPVKQPYYLQTQDPIKLFEPSLQPPVM
QQQPLEKKMKPFPMEPYNHNPSEVKVPEFYWDSSYSMADNRSVMAQQANIDRRGKRSPGV
FRPEQDPVPRMPFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPG
RSLFKSLLEKPSELISHSSSFLSLTGFSLNQERYPNNSMFNEVYGKNLTSSSKAELSPSV
APQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFG
PIGTPDNRDRRTADRWKTDKPAMGGFGIDYLSATSSSESSWHQASTPSGTWTGHGPSMED
SSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq 3564 nt   +upstreamnt  +downstreamnt
atgagcctgcagagcgcgcagtacctccggcaggcagaagtcctgaaggctgacatgaca
gattctaagctgggtccagctgaagtctggacatccaggcaggctctgcaggacctgtac
cagaaaatgctagttaccgatttggaatacgctttagacaagaaagtagaacaggatctc
tggaatcacgcctttaagaatcagatcacaacactacaaggccaggcaaagaatcgagca
aatccgaatcggagtgaagttcaggcaaacctttctctgttcctagaggcagctagtggc
ttctatactcagttattacaagaactgtgtacagtatttaatgtagatttaccatgccgt
gtgaagtcttcccaattgggaattatcagcaataaacagacgcataccagcgccatagtg
aagccacagtctagctcctgttcctatatctgccagcactgcctcgtccaccttggagac
attgctcgatacagaaaccagaccagccaggcagagtcctactataggcatgcagctcag
cttgtcccctccaatggtcagccttataatcagttggctatcttagcttcttccaaagga
gaccatctgaccacaattttctactactgcagaagcattgctgtgaagttccctttccca
gctgcctccactaatctgcaaaaagcactttctaaagcactggaaagccgagatgaggtg
aaaaccaagtggggtgtttccgacttcatcaaggcctttattaaattccacggtcatgtg
tacctgagtaagagcttggaaaagttgagccctcttcgagagaaattggaagaacagttt
aagaggctgctattccaaaaagctttcaactctcagcagttagttcatgtcactgtcatt
aacctgtttcaacttcatcaccttcgtgactttagcaatgaaaccgagcagcacagttat
agccaagatgagcagctatgttggacacagttgctggccctctttatgtcttttcttggc
atcctgtgcaagtgtcctctacagaatgagtctcaggaggagtcctacaatgcctatcct
cttccagcagtcaaggtctccatggactggctaagactcagacccagggtctttcaggag
gcagtggtggatgaaaaacagtacatttggccctggttgatttctcttctgaatagtttc
catccccatgaagaggacctctcaagtattagtgcgacaccacttccagaggagtttgaa
ttacaaggatttttggcattgagaccttctttcaggaacttggatttttccaaaggtcac
cagggtattacaggggacaaagaaggccagcaacgacgaatacgacagcaacgcttgatc
tctataggcaaatggattgctgataatcagccaaggctgattcagtgtgaaaatgaggta
gggaaattgttgtttatcacagaaatcccagaattaatactggaagaccccagtgaagcc
aaagagaacctcattctgcaagaaacatctgtgatagagtcgctggctgcagatgggagc
ccagggctaaaatcagtgctatctacaagccgaaatttaagcaacaactgtgacacagga
gagaagccagtggttaccttcaaagaaaacattaagccacgagaagtgaacagagaccaa
ggcagaagttttcctcccaaagaggtgagaagggactatagcaaaggaataactgtaact
aagaatgatggaaagaaggacaacaacaagaggaaaactgaaaccaagaaatgcacctta
gaaaagttacaggaaacaggaaagcagaatgtggcagtgcaggtaaaatcccagacagaa
ctaagaaagactccagtgtctgaagccagaaaaacacctgtaactcaaaccccaactcaa
gcaagtaactcccagttcatccccattcatcaccctggagccttccctcctcttcccagc
aggccagggtttccgcccccaacatatgttatccccccgcctgtggcattttctatgggc
tcaggttacaccttcccagctggtgtttctgtcccaggaacctttcttcagcctacagct
cactctccagcaggaaaccaggtgcaagctgggaaacagtcccacattccttacagccag
caacggccctctggaccagggccaatgaaccagggacctcaacaatcacagccaccttcc
cagcaaccccttacatctttaccagctcagccaacagcacagtctacaagccagctgcag
gttcaagctctaactcagcaacaacagtcccctacaaaagctgtgccggctttggggaaa
agcccgcctcaccactctggattccagcagtatcaacaggcagatgcctccaaacagctg
tggaatccccctcaggttcaaggcccattagggaaaattatgcctgtgaaacagccctac
taccttcagacccaagaccccataaaactgtttgagccgtcattgcaacctcctgtaatg
cagcagcagcctctagaaaaaaaaatgaagccttttcccatggagccatataaccataat
ccctcagaagtcaaggtcccagaattctactgggattcttcctacagcatggctgataac
agatctgtaatggcacagcaagcaaatatagaccgcaggggcaaacggtcaccaggagtc
ttccgtccagagcaggatcctgtacccaggatgccgtttgaggaccccaagagctcccct
ctgcttcctccggacctgttaaagagtctggctgccttggaggaagaggaagagctgatt
ttttctaaccctcctgatctttacccggctctgctggggcctctcgcctctcttcctgga
cgaagcctttttaaatccttattggagaagccctcagagctcatatcacattcatcctct
ttcctgtccctcaccggattctctctcaatcaggaaagatacccaaataatagtatgttc
aatgaggtatatgggaaaaacctgacatccagctccaaagcagaactcagtccctcagtg
gccccccaggaaacatctctgtattccctttttgaagggactccgtggtctccatcactt
cctgccagttcagatcattcaacaccagccagccagtctcctcattcctctaacccaagc
agcctgcccagctctcctccaacacacaaccataattctgttccattctccaattttgga
cccattgggactccagataacagggatagaaggactgcagatcggtggaaaaccgataag
ccagccatgggtgggtttggcattgattatctctcagcaacgtcatcctctgagagcagt
tggcatcaggccagcactccgagtggcacctggacaggccatggcccctccatggaggat
tcctctgctgtcctcatggaaagcctaaagtctatctggtccagttccatgatgcatcct
ggaccttctgctctggagcagctgttaatgcagcagaagcagaaacagcaacggggacaa
ggcaccatgaaccctccacactga

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