KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101134754
Entry
101134754         CDS       T02442                                 
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101134754 (PATL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ggo03019]
    101134754 (PATL1)
Messenger RNA biogenesis [BR:ggo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     101134754 (PATL1)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     101134754 (PATL1)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 101134754
NCBI-ProteinID: XP_004051300
Ensembl: ENSGGOG00000004335
UniProt: G3QNX6
LinkDB
Position
9:complement(join(67406704..67406725,67407361..67407510,67407605..67407696,67410367..67410522,67414899..67415058,67416610..67416758,67417887..67417946,67418677..67418774,67419593..67419716,67419967..67420147,67421111..67421200,67422647..67422864,67423080..67423169,67423626..67423727,67424657..67424851,67426005..67426085,67426391..67426608,67434003..67434114,67436031..67436045))
AA seq 770 aa
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFTQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPSATPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHPQ
HRRLLHQRQQQNRNQHRNLNGAGDRGSHRSNHQDHLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFEKLEKLSAAEEIQGDGPKKERTKLITPQVAKLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE
RRYLLSLEEERPALMDDRKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARI
LPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVSITSLLRQLM
NLPQSAATPAPSNPHLTAVLQNKFGLSLLLILLSRGEDLQSSDPATESTQHNQWTEVMFM
ATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq 2313 nt   +upstreamnt  +downstreamnt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaagatgcatttcag
ggactgggagaagaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgcctggctgaattggaagaaaagctc
ccagtggcagttaatgaacaaacaggcaatggagagagagatgaaatggacttgttgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgaactagaa
gatccagctattatgagggcagtgcagaccaggccagttttacaaccccaaccaggaagt
ctgaattccagtatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggaaatgcctacagtgtctgtattagaatatgctttgcctcagaggcccccccag
ggtccagaagatgatcgggacctttctgaacgtgcattaccaaggcggtcaacttcacct
atcattggcagtcctcctgttagagctgtccccataggcaccccacctaaacagatggct
gtacccagcttcacccaacagattctgtgtccgaagcctgtccatgttcggcccccaatg
ccacctcgttatcctgctccctatggtgagaggatgtctccaaaccagctctgcagtgtc
ccgaactcttccctcctgggtcacccttttcctcctagtgttcctcctgttctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagtccacttgctgccatgaatcccaagttg
ctacaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccaccctccgctacaccacctccacagcagcaccctcctggcccaggaccccacctg
caaaacctaagatctcaggccccaatgtttagaccggacacaactcaccttcatccacag
caccgtcgactcttgcatcagagacagcaacagaatagaaatcagcatcggaatctcaat
ggtgcgggagatagaggaagtcaccggagcaatcatcaagatcatctccgaaaggatcca
tatgccaatctcatgttgcagcgggaaaaggattgggtctctaaaatccagatgatgcaa
ctgcaaagcactgatccctacctggatgatttttattaccagaattacttcgaaaaactg
gagaaactttcagctgctgaagaaatacaaggtgatggccctaagaaggagcgcaccaag
cttatcacccctcaggtggccaaactggagcacgcctataagccagtgcaatttgagggc
tctttgggaaagcttaccgtttctagtgtgaataatccccgaaaaatgattgatgctgtt
gtgacatctcggagtgaggatgatgagacgaaagaaaaacaagttcgagacaagaggaga
aaaacccttgttataattgagaaaacctacagcttactccttgacgtggaggactatgaa
agacgttatctcctaagtctggaagaagagcgacctgccctaatggatgacagaaagcac
aaaatttgtagcatgtatgacaacttaagggggaaattgcctggacaagagaggcctagt
gatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgtatt
cttcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaacctc
cctttccttatcaagaaggatgcacaagatgaggtgctgccatgcttactgagtcccttc
tctctcctcctctatcatcttccatcagtgagtatcaccagccttttgcgacagctaatg
aacctacctcaaagtgcagctacaccagcaccctccaatcctcacctcactgctgtgctc
cagaacaagtttggcctgtcactgctcctcatcctcctgagccgtggtgaagacctacag
agttcagaccctgctacagaatcaacacaacataatcagtggacggaggtgatgttcatg
gcaacacgagaacttctacggattccccaagcagccctggccaagccaatctctatacct
acaaacctagtgtccctcttttctcgctatgttgaccggcagaaactgaacttgctggag
acaaaactgcagctagttcaggggatacgataa

DBGET integrated database retrieval system