KEGG T02442: 101136148

Gorilla gorilla gorilla (western lowland gorilla): 101136148

Entry

101136148         CDS       T02442

Symbol

CPSF4

Name

(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X2

K14404

cleavage and polyadenylation specificity factor subunit 4

Organism

ggo Gorilla gorilla gorilla (western lowland gorilla)

Pathway

ggo03015

mRNA surveillance pathway

ggo05164

Influenza A

Brite

KEGG Orthology (KO) [BR:ggo00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101136148 (CPSF4)
09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    101136148 (CPSF4)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ggo03021]
    101136148 (CPSF4)
   03019 Messenger RNA biogenesis [BR:ggo03019]
    101136148 (CPSF4)
Transcription machinery [BR:ggo03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     101136148 (CPSF4)
Messenger RNA biogenesis [BR:ggo03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     101136148 (CPSF4)

SSDB

Motif

Pfam:

zf-CCCH zf_CCCH_4 Torus zf-CCCH_3 zf-CCCH_2 zf-CCCH_12 zf-CCHC zf-CCCH_4 zf-CCCH_RBM22 zf-CCCH_DUS3L zf-C3H1 Nab2-like_zf-CCCH_

Other DBs

NCBI-GeneID:

101136148

NCBI-ProteinID:

XP_004045873

Ensembl:

ENSGGOG00000015131

LinkDB

Position

6:complement(join(89373194..89373262,89375555..89375650,89377248..89377320,89378895..89378988,89379342..89379437,89381438..89381590,89384862..89384912,89390543..89390645))

AA seq 244 aa
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
LPQQTQPPAKQRTPQVIGVMQSQNSSAGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAF
LSGQ

NT seq 735 nt +upstreamnt +downstreamnt
atgcaggaaatcatcgccagcgtggaccacatcaagtttgacttggagatcgcggtggag
cagcagctgggggcgcagccgctgcccttccccggcatggacaagtcgggcgctgctgtc
tgtgaattctttttgaaagctgcctgcggcaaagggggcatgtgtccgtttcgccacatc
agtggtgagaagacagttgtgtgcaaacactggctgcgtggcctatgcaagaaaggggac
cagtgtgagttcctgcatgagtatgacatgaccaagatgcccgagtgctacttctactcc
aagttcggggagtgcagcaacaaggaatgtcccttcctgcacatcgaccccgagtccaag
atcaaggactgtccttggtatgaccgcggcttctgcaagcacggtcccctctgcaggcac
cggcacacacggagagtcatctgtgtgaattacctcgtgggattctgcccggaggggccc
tcgtgtaaattcatgcaccctcgatttgaactgcccatgggaaccaccgagcagccccca
ctgccgcagcagacacagcctccagcaaagcagagaaccccgcaggtcatcggggtcatg
cagagtcaaaacagcagcgcgggcaaccggggaccccggccactggagcaggtcacctgt
tacaagtgtggcgagaaaggacactacgccaacagatgcaccaaagggcacttggccttt
ctcagtggacagtga

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