KEGG T02442: 101138126

Gorilla gorilla gorilla (western lowland gorilla): 101138126

Entry

101138126         CDS       T02442

Symbol

SMU1

Name

(RefSeq) WD40 repeat-containing protein SMU1

K13111

WD40 repeat-containing protein SMU1

Organism

ggo Gorilla gorilla gorilla (western lowland gorilla)

Brite

KEGG Orthology (KO) [BR:ggo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ggo03041]
    101138126 (SMU1)
Spliceosome [BR:ggo03041]
Complex B
  Other components
   Complex B specific factors
    101138126 (SMU1)

SSDB

Motif

Pfam:

Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_EML WD40_Gbeta Beta-prop_WDR90_POC16_2nd LisH_TPL WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_Aladin Beta-prop_HPS5 Beta-prop_WDR41 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_BBS7 Beta-prop_IP5PC_F Beta-prop_DCAF12 Beta-prop_RSE1_2nd TFIIIC_delta DUF7165 VPS8_N KNTC1_N PROPPIN Beta-prop_NOL10_N LisH LisH_PAC1

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

13:complement(join(31002421..31002519,31003234..31003386,31007938..31008105,31010955..31011081,31011665..31011792,31012453..31012569,31015301..31015420,31016911..31017039,31024016..31024126,31026949..31027101,31028803..31029013,31031811..31031836))

AA seq 513 aa
MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD
GHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP

NT seq 1542 nt +upstreamnt +downstreamnt
atgtcgatcgaaatcgaatcttcggatgtgatccgccttattatgcagtacttgaaggag
aacagtttacatcgggcgttagccaccttgcaggaggagactactgtgtctctgaatact
gtggacagcattgagagttttgtggctgacattaacagtggccattgggatactgtgttg
caggctatacagtctctgaaattgccagacaaaaccctcattgacctctatgaacaggtt
gttctggaattgatagagctccgtgaattgggtgctgccaggtcacttttgagacagact
gatcccatgatcatgttaaaacaaacacagccagagcgatatattcatctggagaacctt
ttggccaggtcttactttgatcctcgtgaggcatacccagatggaagtagcaaagaaaag
agaagagcagcaattgcccaggccttagctggcgaagtcagtgtggtgcctccatctcgt
ctcatggcattgctgggacaggcactgaagtggcagcagcatcagggattgcttcctcct
ggtatgaccatagatttgtttcgaggcaaggcagctgtcaaagatgtggaagaagaaaag
tttcctacacaactgagcaggcatattaagtttggtcagaaatcacatgtggagtgtgct
cgattttctccagatggtcagtatttggtcactgggtctgttgatggattcattgaagta
tggaactttactactggaaaaatcagaaaggatcttaagtaccaggcccaagataacttt
atgatgatggatgatgctgtcctctgcatgtgtttcagcagagatacagaaatgttagca
actggggcccaagatggaaaaatcaaggtgtggaagattcagagtggacaatgtttaagg
agatttgagagggcacacagtaagggtgtcacctgtctaagcttttctaaggatagcagt
cagatccttagtgcttcttttgaccagacaattagaattcatggtttaaaatctgggaaa
accctgaaggaatttcgtggccattcctcctttgttaacgaagcaacatttacacaagat
ggacattacattattagtgcatcctctgatggcactgtaaagatctggaatatgaagacc
acagaatgttcaaatacctttaaatccctgggcagcaccgcagggacagatattaccgtc
aacagtgtgattctacttcctaaaaaccctgagcactttgtggtgtgcaacagatcaaac
acggtggtcatcatgaacatgcaggggcagattgtcagaagcttcagttctggtaaaaga
gaaggtggggactttgtttgctgtgccctctctccccgtggtgaatggatctactgtgta
ggggaggactttgtgctctactgtttcagtacagtcactggcaaactggagagaactttg
acagtgcatgagaaggatgtgattggtattgcacatcaccctcatcagaacctgattgct
acctacagtgaagatggactcctaaagctctggaaaccataa

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