KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101138897
Entry
101138897         CDS       T02442                                 
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X6
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo03082  ATP-dependent chromatin remodeling
ggo04714  Thermogenesis
ggo05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101138897 (SMARCC2)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    101138897 (SMARCC2)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    101138897 (SMARCC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ggo03021]
    101138897 (SMARCC2)
   03036 Chromosome and associated proteins [BR:ggo03036]
    101138897 (SMARCC2)
Transcription machinery [BR:ggo03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     101138897 (SMARCC2)
Chromosome and associated proteins [BR:ggo03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    101138897 (SMARCC2)
   PBAF complex
    101138897 (SMARCC2)
   GBAF(ncBAF) complex
    101138897 (SMARCC2)
SSDB
Motif
Pfam: SWIRM-assoc_2 SWIRM-assoc_3 SWIRM SWIRM-assoc_1 Myb_DNA-binding Myb_DNA-bind_6 Chromo CD99L2
Other DBs
NCBI-GeneID: 101138897
NCBI-ProteinID: XP_004053398
Ensembl: ENSGGOG00000003282
UniProt: G3QL85
LinkDB
Position
10:join(45177264..45177374,45179422..45179541,45180487..45180572,45181611..45181692,45181790..45181882,45182482..45182551,45182796..45182865,45184650..45184725,45184894..45185025,45185132..45185247,45185628..45185752,45187374..45187433,45187583..45187620,45187896..45188026,45188337..45188408,45191667..45191780,45192577..45192730,45193721..45193840,45193935..45193997,45194488..45194746,45194993..45195154,45196228..45196292,45196525..45196660,45196743..45196909,45198249..45198383,45200733..45201114,45201697..45202125,45202663..45202739)
AA seq 1214 aa
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQQTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATRE
WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLA
YQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVE
EAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGG
AIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVE
SEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLE
IKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQ
PPPALPPGSQPIPPTGAAGPPAVHGLAVASASVVPAPAGSGAPPGSLGPSEQIGQAGSTA
GPQQQQPAGAPQPGAVPPGIPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLG
LPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMA
NPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPT
APSPGTVTPVPPPQ
NT seq 3645 nt   +upstreamnt  +downstreamnt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctgtggctcggcaagaactacaagaagtatatacaa
gctgaaccacccaccaacaagtccctgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcgggaggctccttgtgccacattcttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaat
gtggaaatgtttatgaccattgagaagtccttggtgcagaataattgcctgtctcgacct
aacatttttctgtgcccagaaattgagcccaaactactagggaaattaaaggacattatc
aagagacaccagggaacagtcactgaggataagaacaatgcctcccatgttgtgtatcct
gtcccggggaatctagaagaagaggaatgggtacgaccagtcatgaagagggataagcag
gttcttctgcactggggctactatcctgacagttatgacacatggatcccagcgagtgaa
attgaagcatctgtggaagatgctccaactcctgagaaacctaggaaggttcatgcaaag
tggatcctggacaccgacaccttcaatgaatggatgaatgaggaagactacgaagtaaat
gatgacaaaaaccctgtctcccgccgaaagaagatttcagccaagacactgacagatgag
gtgaacagcccagattcagatcgacgggacaagaaggggggaaactataagaagaggaag
cgctccccctctccttcaccaaccccagaagcgaagaagaaaaatgctaagaaaggtccc
tcaacaccttacactaagtcaaagcgtggccacagagaagaggagcaagaagacctgaca
aaggacatggacgagccctcaccagtccccaatgtagaagaggtgacacttcccaaaaca
gtcaacacaaagaaagactcagagtcggccccagtcaaaggcggcaccatgactgacctg
gatgaacaggaagatgaaagcatggagacgacgggcaaggatgaggatgagaacagtacg
gggaacaagggagagcagaccaagaatccagacctgcatgaggacaatgtgactgaacag
acccaccacatcatcattcccagctacgctgcctggtttgactacaatagcgttcatgcc
attgagcggagggctctccccgagttcttcaacggcaagaacaagtccaagactccagag
atctacctggcctatcgaaactttatgattgacacttaccgactgaacccccaagagtat
cttacctctaccgcctgccgccgaaacctagcgggtgatgtctgtgccatcatgagggtc
catgccttcctagaacagtggggtcttattaactaccaggtggatgctgagagtcgacca
accccaatggggcctccgcctacctctcacttccatgtcttggctgacacaccatcaggg
ctggtgcctctgcagcccaagacacctcagcagacctctgcttcccaacaaatgctcaac
tttcctgacaaaggcaaagagaaaccaacagacatgcaaaactttgggctgcgcacagac
atgtacacaaaaaagaatgttccctccaagagcaaggctgcagccagtgccactcgtgag
tggacagaacaggaaaccctgcttctcctggaggcactggaaatgtacaaagatgactgg
aacaaagtgtccgagcatgtgggaagccgcacacaggacgagtgcatcttgcattttctt
cgtcttcccattgaagacccatacctggaggactcagaggcctccctaggccccctggcc
taccaacccatccccttcagtcagtcgggcaaccctgttatgagcactgttgccttcctg
gcctctgtcgtcgatccccgagtcgcctctgctgctgcaaagtcagccctagaggagttc
tccaaaatgaaggaagaggtacccacggccttggtggaggcccatgttcgaaaagtggaa
gaagcagccaaagtaacaggcaaggcggaccctgccttcggtctggaaagcagtggcatt
gcaggaaccacctctgatgagcctgagcggattgaggagagcgggaatgacgaggctcgg
gtggaaggccaggccacagatgagaagaaggagcccaaggaaccccgagaaggagggggt
gctatagaggaggaagcaaaagagaaaaccagcgaggctcccaagaaggatgaggagaaa
gggaaagaaggcgacagtgagaaggagtccgagaagagtgatggagacccaatagtcgat
cctgagaaggagaaggagccaaaggaagggcaggaggaagtgctgaaggaagtggtggag
tctgagggggaaaggaagacaaaggtggagcgggacattggcgagggcaacctctccacc
gctgctgctgccgccctggccgccgccgcagtgaaagccaagcacttggctgctgttgag
gaaaggaagatcaaatctttggtggccttgctggtggagacccagatgaaaaagttggag
atcaaacttcggcactttgaggagctggagactatcatggaccgggagcgagaagcactg
gagtatcagaggcagcagctcctggccgacagacaagccttccacatggagcagctgaag
tatgcggagatgagggctcggcagcagcacttccaacagatgcaccaacagcagcagcag
ccaccaccagccctgcccccaggctcccagcctatccccccgacaggggctgctgggcca
cccgcagtccatggcttggctgtggcttcagcctctgtagtccctgctcctgctggcagt
ggggcccctccaggaagcttgggcccttctgaacagattgggcaggcagggtcaactgca
gggccacagcagcagcaaccagctggagcgccccagcctggggcagtcccaccagggatt
cccccccctggaccccatggcccctcaccgttccccaaccaacaaactcctccctcaatg
atgccaggggcagtgccaggcagcgggcacccaggcgtggcgggtaatgctcctttgggt
ttgccttttggcatgccgcctcctcctcctcctcctgctccatccatcatcccatttggt
agtctagctgactccatcagtattaacctccccgctcctcctaacctgcatgggcatcac
caccatctcccgttcgccccgggcactctccccccacctaacctgcctgtgtccatggcg
aaccctctacatcctaacctgccggcgaccaccaccatgccatcttccttgcctctcggg
ccggggctcggatccgccgcagcccaaagccctgccattgtggcagctgttcagggcaac
ctcctgcccagtgccagcccactgccagacccaggcacccccctgcctccagaccccaca
gccccgagcccaggcacggtcacccctgtgccacctccacagtga

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