KEGG T02442: 101138943

Gorilla gorilla gorilla (western lowland gorilla): 101138943

Entry

101138943         CDS       T02442

Symbol

CDKAL1

Name

(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1

K15865

threonylcarbamoyladenosine tRNA methylthiotransferase [EC:2.8.4.5]

Organism

ggo Gorilla gorilla gorilla (western lowland gorilla)

Brite

KEGG Orthology (KO) [BR:ggo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ggo03016]
    101138943 (CDKAL1)
Enzymes [BR:ggo01000]
2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     101138943 (CDKAL1)
Transfer RNA biogenesis [BR:ggo03016]
Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    101138943 (CDKAL1)
Prokaryotic type
   Methylthiotransferases
    101138943 (CDKAL1)

SSDB

Motif

Pfam:

UPF0004 Radical_SAM TRAM

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

5:join(38252158..38252330,38254416..38254528,38348193..38348277,38438696..38438792,38462068..38462116,38484350..38484470,38549200..38549303,38659667..38659833,38704437..38704582,38769301..38769481,38812615..38812677,38901864..38901947,38904932..38905096,38934936..38935127)

AA seq 579 aa
MPSASCDTPLDDIEDIVSQEDSKPQDRHFVRKDVVPKVRRRNTQKYLQEEENSPPSDSTI
PGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFR
NSIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLG
QKKDNGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVD
RAKQSFQEGVCEIWLTSEDTGAYGRDIGTNLPTLLWKLVEVIPEGAMLRLGMTNPPYILE
HLEEMAKILNHPRVYAFLHIPVQSASDSILMEMKREYCVADFKRVVDFLKEKVPGITIAT
DIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKMEQVPAQVKKQRTKDL
SRVFHSYSPYDHKIGERQQVLVTEESFDSKFYVAHNQFYEQVLVPKNPAFMGKMVEVDIY
ESGKHFMKGQPVSDAKVYTPSISKPLAKGEVSGLTKDFRNGLGNQLSSGSHTSAASQCDS
ASSRMVLPMPRLHQDCALRMSVGLALLGLLFAFFVKVYN

NT seq 1740 nt +upstreamnt +downstreamnt
atgccttctgcatcctgtgatacaccactggatgacatcgaagatatcgtgtctcaggaa
gattcaaaaccacaagataggcattttgtaagaaaggatgttgtcccgaaggtacgaagg
cgaaatacccaaaaatatttgcaagaggaagaaaacagtccaccaagtgacagcactatt
ccaggcatacagaaaatttggatacgaacatggggttgttctcataataattcagatgga
gaatatatggctggacagctagctgcttatggctataaaattacagaaaatgcatccgat
gcagatttatggctcctgaacagttgcactgtaaaaaacccagctgaagaccactttaga
aactcaattaaaaaagctcaagaggagaacaagaaaatcgtactggctggatgcgttcct
caagcccaacctcgccaggactaccttaagggactgagtatcattggggttcagcagata
gatcgtgtggtagaagttgtggaggaaacaattaaaggtcactctgtgagactgctgggt
cagaaaaaggataatggaaggcggcttgggggagcacgattggatttgccgaagattagg
aagaatccactgatagaaatcatttccatcaataccgggtgtctcaatgcttgtacctac
tgcaaaactaaacacgccagaggaaatttggccagttatccaattgatgaactagtagat
agagccaaacaatcttttcaagagggtgtttgtgagatatggttgaccagtgaagacacg
ggggcttatggcagagatattggcaccaatctccccacactcctgtggaaactggttgaa
gtgattcctgagggagcaatgctgaggcttggcatgacaaatccgccctatattttagag
catctggaggaaatggcaaaaatccttaatcaccccagagtctacgcttttctgcacata
ccagtccagtctgcctccgacagcatactcatggaaatgaaaagagaatactgtgtggct
gacttcaaaagagtagtggattttctgaaagagaaagttcctggaataactattgctaca
gatattatctgtggttttcctggagaaacagatcaggattttcaagaaacagtgaaactt
gttgaagagtacaaattcccaagcctctttattaaccaattttacccaagaccaggaact
cctgctgcaaaaatggaacaagttccagcacaagtgaaaaagcaaaggacaaaagatctt
tctcgggtatttcattcttacagtccatatgatcacaagattggtgaaagacaacaagtg
ttagtaacagaagaatcttttgattccaagttttatgttgcacacaatcaattctatgag
caggttttagtgccaaagaaccctgcgttcatggggaagatggttgaagtggacatctat
gaatcaggcaaacattttatgaaagggcagccggtatctgatgccaaagtgtacacgccc
tccatcagcaaaccgctagcaaagggagaagtctcaggtttgacaaaggacttcagaaat
gggcttgggaaccagctgagttcaggatcccacacctctgctgcatctcagtgtgactca
gcgagttccagaatggtgctgcccatgccaaggctacatcaagactgtgcgctgaggatg
tccgtgggcttggctctgctgggtcttctttttgctttttttgtcaaggtctataattag

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