KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101139932
Entry
101139932         CDS       T02442                                 
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
  KO
K12619  5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo03008  Ribosome biogenesis in eukaryotes
ggo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101139932 (XRN2)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101139932 (XRN2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ggo03021]
    101139932 (XRN2)
   03019 Messenger RNA biogenesis [BR:ggo03019]
    101139932 (XRN2)
   03009 Ribosome biogenesis [BR:ggo03009]
    101139932 (XRN2)
   03016 Transfer RNA biogenesis [BR:ggo03016]
    101139932 (XRN2)
Transcription machinery [BR:ggo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     101139932 (XRN2)
Messenger RNA biogenesis [BR:ggo03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     101139932 (XRN2)
Ribosome biogenesis [BR:ggo03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    101139932 (XRN2)
Transfer RNA biogenesis [BR:ggo03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    101139932 (XRN2)
SSDB
Motif
Pfam: XRN_M XRN_N
Other DBs
NCBI-GeneID: 101139932
NCBI-ProteinID: XP_018872861
Ensembl: ENSGGOG00000013738
LinkDB
Position
21:join(31310646..31310954,31333495..31333622,31333706..31333817,31335775..31335886,31337685..31337743,31337820..31337909,31338846..31338918,31339053..31339103,31339568..31339725,31340832..31340906,31340992..31341125,31341225..31341282,31341366..31341473,31346330..31346374,31348013..31348144,31351381..31351499,31353705..31353840,31355435..31355542,31355630..31355719,31356677..31356749,31362036..31362119,31363329..31363426,31363835..31363914,31364984..31365040,31372654..31372722,31372806..31372937,31375696..31375823,31389216..31389279,31394088..31394226,31396498..31396563)
AA seq 1028 aa
MGSAACPRGALPELAPCCQPREQSQPHTRWDAGCGIQHPGGEEFRTLGGARAYGVPNSQE
GRSSPTRFFPAPEGPAHCFVSSPDRAFWVSEEVQRLLLSNACQPKECNGVKIPVDASKPN
PNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAI
DGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITP
GTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHD
PNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPRE
KKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFV
GNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDS
IFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAY
EMRMQNNSSPSISPNTSFTSDGSPSPLGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYK
NKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMP
SDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKY
AWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQT
GSTEPVDVPPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAE
DYIFKAVMLPGARKPAAVLKPSDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHVM
PRGSGTGIYSNAAPPPATYQGNLYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFD
RGVGAEPLLPWNRMLQTQNAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPREGRKYPLPP
PSGRYSWN
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgggctccgccgcctgcccccggggagccttgccggagctcgcgccctgctgccagcct
cgcgagcagtcgcagccccacacgcggtgggacgcgggctgtgggattcagcaccccggg
ggcgaggaattcaggaccctcggcggggcaagggcctatggggttccgaactcgcaggag
ggtcgctcctcccctactcgctttttcccggcaccggaaggccccgcccactgctttgtt
tcctctccagaccgcgcattttgggtctcggaagaggttcagaggctgttgttgagcaat
gcatgccagccaaaagaatgcaatggtgtaaagattccagttgatgccagtaaacctaat
ccaaatgatgtggagtttgataatctgtatttggatatgaatggaatcatccatccctgt
actcatcctgaagacaaaccagcaccaaaaaatgaagatgaaatgatggttgcaattttt
gagtacattgacagacttttcagtattgtaagaccaagacgacttctctacatggcaata
gatggagtggcaccacgtgctaaaatgaaccagcagcgttcaaggaggttcagggcatca
aaagaaggaatggaagcagcagtcgagaagcagcgagtcagggaagaaatattggcaaaa
ggtggctttcttcctccagaagaaataaaagaaagatttgacagcaactgtattacacca
ggaactgaattcatggacaatcttgctaaatgccttcgctattacatagctgatcgttta
aataatgaccctgggtggaaaaatttgacagttattttatctgatgctagtgctcctggt
gaaggagaacataaaatcatggattacattagaaggcaaagagcccagcctaaccatgac
ccaaatactcatcattgtttatgtggagcagatgctgatctcattatgcttggccttgcc
acacatgaaccgaactttaccattattagagaagaattcaaaccaaacaagcccaaacca
tgtggtctttgtaatcagtttggacatgaggtcaaagattgtgaaggtttgccaagagaa
aagaagggaaagcatgatgaacttgctgatagtcttccttgtgcagaaggagagtttatc
ttccttcggcttaatgttcttcgtgagtatttggaaagagaactcacaatggccagccta
ccattcacatttgatgttgagaggagcattgatgactgggttttcatgtgcttctttgtg
ggaaatgacttcctccctcatttgccgtcgttagagattagggaaaatgcaattgaccgt
ttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttacagaaagtggt
tatgtcaatctgcagagagtacagatgatcatgttagcagttggtgaagttgaggatagc
atttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaagaaaaaaga
aagagaatgaagagagatcaaccagctttcactcctagtggaatattaactcctcatgcc
ttgggttcaagaaattcaccaggttctcaagtagccagtaatccgagacaagcagcctat
gaaatgaggatgcagaataactctagtccttcgatatctcctaatacgagtttcacatct
gatggctccccgtctccattaggaggaattaagcgaaaagcagaagacagtgacagtgaa
cctgagccagaggataatgtcaggttatgggaagctggctggaagcagcggtactacaag
aacaaatttgatgtggatgcagctgatgagaaattccgtcggaaagttgtgcagtcgtac
gttgaaggactttgctgggttcttagatattactaccagggctgtgcttcctggaagtgg
tattatccatttcattatgcaccatttgcttcagactttgaaggcattgcagacatgcca
tctgattttgagaagggtacgaaaccgtttaaaccactagaacaacttatgggggtattt
ccagctgcaagtggtaattttctacctccatcatggcggaagctcatgagtgatcctgat
tctagtataattgacttctatcctgaagattttgctattgatttgaatgggaagaaatat
gcatggcaaggtgttgctctcttgccatttgtggatgagcgaaggctacgagctgcccta
gaagaggtatacccagacctcactccagaagagaccagaagaaacagccttggaggtgat
gtcttatttgtggggaaacatcacccactccatgacttcattttagagctgtaccagaca
ggttccacagagccagtggatgtaccccctgaactatgtcatgggattcaaggaaagttt
tctttggatgaagaagccattcttccagatcaaatagtatgttctcctgttcctatgtta
agggatctgacacagaacactgtagtcagtattaattttaaagacccccagtttgctgaa
gattacatttttaaagctgtaatgcttccaggagcaagaaagccagcagcagtactgaaa
ccgagtgactgggaaaaatccagcaatggacggcagtggaagcctcagcttggctttaac
cgtgaccggaggcctgtgcacctggatcaggcagccttcaggactttgggccatgttatg
ccaagaggctcaggaactggcatttacagcaatgctgcaccaccacctgcgacttaccag
ggaaacttatacaggccgcttttgagaggacaagcccagattccaaaacttatgtcaaat
atgaggccccaggattcctggcgaggtcctcctccccttttccagcagcaaaggtttgac
agaggcgttggggctgaacctctgctcccatggaaccggatgctgcaaacccagaatgca
gccttccagccaaaccagtaccagatgctagctgggcctggtgggtatccacccagacga
gatgatcgtggagggagacagggatatcccagagaaggaaggaaataccctttgccacca
ccctcaggaagatacagttggaattaa

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